| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835643
GI number: 15835643
Start: 136100
End: 136873
Strand: Reverse
Name: Not Available
Synonym: CPj0107
Alternate gene names: NA
Gene position: 136873-136100 (Counterclockwise)
Preceding gene: 15835644
Following gene: 15835641
Centisome position: 11.16
GC content: 44.32
Gene sequence:
>774_bases ATGGTTTCTCCTCTATCTCTGTTTCATAAGATGCTCTTGGAGAATTGGACTCCTGTAGAGGAGCCGTTCCCATGGCCACC AGCAGAAAAAAACCAGAAAATCTTTGCCTGGGCACTAAATCAATCAAAGCTGATTTTTGTCTCGACGTCAGGAAATATTG CACAACCTCGTCTTGTCACTGATAGTATGTCTATGATGATTGTAAACGCAGCCAATAGAACAATGAGTCGAGATGGGGCG GGTACAAATCAAGTTCTATCGGCAGCAGTCAGTGTCGATTCTTGGGGGCTGTCGCAACGACCTCTAAATCCTGAACGCCA GGGGACTCCTCTTAATGAGGGTGAATGTCGGGCAGGCATGTGGAGAAATGCCGATGGATCCAACCACACAGGAAAACAAG GTAAACCACACTACCTAGCACAACTTCTTGGGCCTAAAGCAGTGGATCATCATAACAAGTCTCAAGCAGCCTTTGATCGC TGCAAAAACGCCTACCTAAACTGCTTCAGCTTAGCTCAAACTTTAGGTGTAACCTTCCTACAAATCCCTCTAATTTCTTC TGGGATCTACGCGCCTCCTGAAAATAGAAAAAAGCCTAATAGTGAAGAGAATAAAGTCCGCATGAGATGGATACACGCTG TAAAATGCGCTCTTGTTGCCGCTATGCAAGAATTTGGAAATGAACCCGGAAATACAGACAGAAGAATGTTGATTGTCCTT ACAGACTTGAAAACTCCTGCTATTACAGATCCGAAGAAGAAAAGTCACTTATAA
Upstream 100 bases:
>100_bases ACCTCAGAGACCAGAGGTCTCCCCTACACCTACAGATCACATTGTACCTGGAAGTATAGAAGCTTCCCCCATCCTAGGCA AGAAACCGTCACCAGACTCT
Downstream 100 bases:
>100_bases CATCGAAGGTTCTATAGGATAGTTGCGGCCGCAGCTGCAAGTTCGGAACGTTCTGTACGTGTCATAAACATGTGTCCATA TAAGGCCAAGTGATGGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MVSPLSLFHKMLLENWTPVEEPFPWPPAEKNQKIFAWALNQSKLIFVSTSGNIAQPRLVTDSMSMMIVNAANRTMSRDGA GTNQVLSAAVSVDSWGLSQRPLNPERQGTPLNEGECRAGMWRNADGSNHTGKQGKPHYLAQLLGPKAVDHHNKSQAAFDR CKNAYLNCFSLAQTLGVTFLQIPLISSGIYAPPENRKKPNSEENKVRMRWIHAVKCALVAAMQEFGNEPGNTDRRMLIVL TDLKTPAITDPKKKSHL
Sequences:
>Translated_257_residues MVSPLSLFHKMLLENWTPVEEPFPWPPAEKNQKIFAWALNQSKLIFVSTSGNIAQPRLVTDSMSMMIVNAANRTMSRDGA GTNQVLSAAVSVDSWGLSQRPLNPERQGTPLNEGECRAGMWRNADGSNHTGKQGKPHYLAQLLGPKAVDHHNKSQAAFDR CKNAYLNCFSLAQTLGVTFLQIPLISSGIYAPPENRKKPNSEENKVRMRWIHAVKCALVAAMQEFGNEPGNTDRRMLIVL TDLKTPAITDPKKKSHL >Mature_257_residues MVSPLSLFHKMLLENWTPVEEPFPWPPAEKNQKIFAWALNQSKLIFVSTSGNIAQPRLVTDSMSMMIVNAANRTMSRDGA GTNQVLSAAVSVDSWGLSQRPLNPERQGTPLNEGECRAGMWRNADGSNHTGKQGKPHYLAQLLGPKAVDHHNKSQAAFDR CKNAYLNCFSLAQTLGVTFLQIPLISSGIYAPPENRKKPNSEENKVRMRWIHAVKCALVAAMQEFGNEPGNTDRRMLIVL TDLKTPAITDPKKKSHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28527; Mature: 28527
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS51154 MACRO
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSPLSLFHKMLLENWTPVEEPFPWPPAEKNQKIFAWALNQSKLIFVSTSGNIAQPRLVT CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEC DSMSMMIVNAANRTMSRDGAGTNQVLSAAVSVDSWGLSQRPLNPERQGTPLNEGECRAGM CCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC WRNADGSNHTGKQGKPHYLAQLLGPKAVDHHNKSQAAFDRCKNAYLNCFSLAQTLGVTFL CCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH QIPLISSGIYAPPENRKKPNSEENKVRMRWIHAVKCALVAAMQEFGNEPGNTDRRMLIVL HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE TDLKTPAITDPKKKSHL ECCCCCCCCCCHHHCCC >Mature Secondary Structure MVSPLSLFHKMLLENWTPVEEPFPWPPAEKNQKIFAWALNQSKLIFVSTSGNIAQPRLVT CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEC DSMSMMIVNAANRTMSRDGAGTNQVLSAAVSVDSWGLSQRPLNPERQGTPLNEGECRAGM CCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC WRNADGSNHTGKQGKPHYLAQLLGPKAVDHHNKSQAAFDRCKNAYLNCFSLAQTLGVTFL CCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH QIPLISSGIYAPPENRKKPNSEENKVRMRWIHAVKCALVAAMQEFGNEPGNTDRRMLIVL HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE TDLKTPAITDPKKKSHL ECCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA