| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is ybbP
Identifier: 15835637
GI number: 15835637
Start: 128849
End: 129643
Strand: Reverse
Name: ybbP
Synonym: CPj0101
Alternate gene names: 15835637
Gene position: 129643-128849 (Counterclockwise)
Preceding gene: 15835640
Following gene: 15835636
Centisome position: 10.57
GC content: 41.26
Gene sequence:
>795_bases ATGCCCTTTGATATTACTTATTATACAACACCTTTGCTAGAAATCATTTTAATTTGGGTAATGTTAAACTACCTATTAAA ATTTTTCTGGGGCACCCGAGCTATGGATGTTGTCTTTGGCTTGCTTGCGTTTCTCTTTCTATTTGTCCTAGCCGATAAAC TCCACCTCCCTATCATCCGTAGATTGATGCTCCACGTAGTCAATATCGCTGCCATCGTGGTCTTTATTATTTTCCAACCA GAAATTCGTTTGGCTCTCTCTCGTATACGATTTCATGGGAAAAAATTCTTCATAGATACTCAAGAGCAGTTCGTAGAGCA ATTAGCTGCCAGTATTTATCAGCTATCAGAACGCCAAATCGGGGCTCTTGTTGTTTTAGAAAACAAAGATTCTTTCGATG AATACCTAAGTTTTTCTTCGGTGAAAATCAATGCAACTTTCTCTGAAGAACTTTTAGAGACGATTTTCGAACCTTCATCT CCATTGCACGATGGTGCCGTCATTCTAAGAGGAGACATTCTAGCCTATGCTCGCGTCGTTCTCCCACTAGCTCATGATAC GACGCAGCTTTCCCGATCCATGGGGACAAGGCATCGCGCAGCTCTAGGAGCTAGCCAGCGATCTGATGCTCTAATTATCA CAGTATCTGAAGAAAATGGAAGTGTCTCTTTGTCTAGAGACGGCCTTCTAACACGCGGAGTAAAAATAGATAGATTCAAA GCGGTACTCCGCAGTATTCTTTCCCCTAAAGAACACAAAAGAAAACCTTTATTCTCTTGGATTTGGAAACGATGA
Upstream 100 bases:
>100_bases TTTGTTCGTATGCTAAGATAATAGGTTACCTTTCCTAGGACAATAGCCGAGCACTTTGTGCAACTTTTCTCAGTATACTA CCCAAGGACCTAGTAAAACT
Downstream 100 bases:
>100_bases TAAAATTTTTATCTCAACTCTTTATTCGGCATTGGCCTAGAAAAGTTGTTTCCTTAGGTTTTGCCATCATCATTTGGATC CTCGTAGGACAAAGTGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MPFDITYYTTPLLEIILIWVMLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHLPIIRRLMLHVVNIAAIVVFIIFQP EIRLALSRIRFHGKKFFIDTQEQFVEQLAASIYQLSERQIGALVVLENKDSFDEYLSFSSVKINATFSEELLETIFEPSS PLHDGAVILRGDILAYARVVLPLAHDTTQLSRSMGTRHRAALGASQRSDALIITVSEENGSVSLSRDGLLTRGVKIDRFK AVLRSILSPKEHKRKPLFSWIWKR
Sequences:
>Translated_264_residues MPFDITYYTTPLLEIILIWVMLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHLPIIRRLMLHVVNIAAIVVFIIFQP EIRLALSRIRFHGKKFFIDTQEQFVEQLAASIYQLSERQIGALVVLENKDSFDEYLSFSSVKINATFSEELLETIFEPSS PLHDGAVILRGDILAYARVVLPLAHDTTQLSRSMGTRHRAALGASQRSDALIITVSEENGSVSLSRDGLLTRGVKIDRFK AVLRSILSPKEHKRKPLFSWIWKR >Mature_263_residues PFDITYYTTPLLEIILIWVMLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHLPIIRRLMLHVVNIAAIVVFIIFQPE IRLALSRIRFHGKKFFIDTQEQFVEQLAASIYQLSERQIGALVVLENKDSFDEYLSFSSVKINATFSEELLETIFEPSSP LHDGAVILRGDILAYARVVLPLAHDTTQLSRSMGTRHRAALGASQRSDALIITVSEENGSVSLSRDGLLTRGVKIDRFKA VLRSILSPKEHKRKPLFSWIWKR
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 30238; Mature: 30107
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFDITYYTTPLLEIILIWVMLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHLPIIR CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLMLHVVNIAAIVVFIIFQPEIRLALSRIRFHGKKFFIDTQEQFVEQLAASIYQLSERQI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCC GALVVLENKDSFDEYLSFSSVKINATFSEELLETIFEPSSPLHDGAVILRGDILAYARVV CEEEEEECCCCHHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHH LPLAHDTTQLSRSMGTRHRAALGASQRSDALIITVSEENGSVSLSRDGLLTRGVKIDRFK HHHCCCHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCHHHCCCCHHHHH AVLRSILSPKEHKRKPLFSWIWKR HHHHHHCCCHHHHCCCHHHHHCCC >Mature Secondary Structure PFDITYYTTPLLEIILIWVMLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHLPIIR CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLMLHVVNIAAIVVFIIFQPEIRLALSRIRFHGKKFFIDTQEQFVEQLAASIYQLSERQI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCC GALVVLENKDSFDEYLSFSSVKINATFSEELLETIFEPSSPLHDGAVILRGDILAYARVV CEEEEEECCCCHHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHH LPLAHDTTQLSRSMGTRHRAALGASQRSDALIITVSEENGSVSLSRDGLLTRGVKIDRFK HHHCCCHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCHHHCCCCHHHHH AVLRSILSPKEHKRKPLFSWIWKR HHHHHHCCCHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]