Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835636

GI number: 15835636

Start: 127590

End: 128852

Strand: Reverse

Name: Not Available

Synonym: CPj0100

Alternate gene names: NA

Gene position: 128852-127590 (Counterclockwise)

Preceding gene: 15835637

Following gene: 15835634

Centisome position: 10.51

GC content: 36.34

Gene sequence:

>1263_bases
ATGATAAAATTTTTATCTCAACTCTTTATTCGGCATTGGCCTAGAAAAGTTGTTTCCTTAGGTTTTGCCATCATCATTTG
GATCCTCGTAGGACAAAGTGTTACCATCACGCGAACACTCACAAATGTCCCTGTGCGCATCGTAGACCTACATCCAGACC
AAACCGTTCTTGGACTACAAAAAAGCGGATTCCTGAATAAAAAAGTCTCTTTAACAATCACTGGGAATAAAAATACCGTT
CAAGACCTCCGTCCTTCAAATTTAGAGGTAGTGATCAGTGCAGCAAACCATACGGAAAGTTGGATTGCCACTATAGATAA
GCATAACCTTGTCTCTGTAGATCATGAGATCAACATACGCAAAGACATCCATAGCGTTGACGCTAACGATATTTTTGTCC
GACTTACACAATATGTAACCGAAGACATTTTATTAACTATAACGAAACCTATAGGGAGTCCCCCGAAAGGATATGAGTAT
TTGGATGTCTGGCCGAAGTACTTGAATCAAAAAGTCAGTGGCCCCAAAGAATATATCAATGCTTTGAAAGAGCAAGGTCT
TGAGCTAACCTTTAATTTGAATAAAATTTCGTTCGAAGAGTTAGAAAGAAATCGCATTGCTCAGGGAAGTCATGACGAAA
TTATTTTCCCCATTCCTAAAGAATGGAAGAAAATTTTGATTCCCTTTGAAAATACCTTCATGGATCTCAATGACCCTCAA
GCAGATTTTCTTCGCCTTTTATTTTTAAAAAGGGAATGCATTCCCCTAAATTTAAATTTACCGGTCTTTCTATTCTTTCC
TGTAACCTTCATTCAAACGATGAATCCTCTAGAGTACAGCTTAGATCCTGTCCCTCCCATTATTCTGAATCATGGAATTC
ATCAAATAAATATTCCTTTATATGTTAAGGATGTAAGTAGACAGTTTTTAGATGTCGTAAAGAACAACATGGTCTTAACA
ATTGTGATGCCCTCACCACAAGACCCTTCTTCGATCAACTGGGCTATAGAATTTTTAGATGAAAAAACTTTAGAAAATAC
TTTTCTTCAGACTATTATAGCCCAAGAACATGGAATTTTACACGATATAGCCCTTATTGATGAGGCTGGAATTCGTCATA
GATTCCGAGAATATTTAAGAAAGCTTGCACTTTTTACAGCAGACGGTGAACCTTTAAATCTTATTGCAGAAATCAAAAAT
AATAAAGTTGTGATCCAGACAAAAACAAAGGAAACAACTAAATTATATAAAAAAGAGTGGTAG

Upstream 100 bases:

>100_bases
CACGCGGAGTAAAAATAGATAGATTCAAAGCGGTACTCCGCAGTATTCTTTCCCCTAAAGAACACAAAAGAAAACCTTTA
TTCTCTTGGATTTGGAAACG

Downstream 100 bases:

>100_bases
TGCAGACTCACTAAAATTTAGTTAGGGGAAACTTTATGTGCTTAATAGATTGCTTGGGCCAGGGCTTTGAAGCTGCAATC
AACACAGTTTGTTGTTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQKSGFLNKKVSLTITGNKNTV
QDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIRKDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEY
LDVWPKYLNQKVSGPKEYINALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMDLNDPQ
ADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPLYVKDVSRQFLDVVKNNMVLT
IVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGILHDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKN
NKVVIQTKTKETTKLYKKEW

Sequences:

>Translated_420_residues
MIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQKSGFLNKKVSLTITGNKNTV
QDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIRKDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEY
LDVWPKYLNQKVSGPKEYINALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMDLNDPQ
ADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPLYVKDVSRQFLDVVKNNMVLT
IVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGILHDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKN
NKVVIQTKTKETTKLYKKEW
>Mature_420_residues
MIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQKSGFLNKKVSLTITGNKNTV
QDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIRKDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEY
LDVWPKYLNQKVSGPKEYINALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMDLNDPQ
ADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPLYVKDVSRQFLDVVKNNMVLT
IVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGILHDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKN
NKVVIQTKTKETTKLYKKEW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48407; Mature: 48407

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEECCC
KSGFLNKKVSLTITGNKNTVQDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIR
CCCCCCCEEEEEEECCCCCHHHCCCCCEEEEEEECCCCCHHHEEECCCCEEEECCCEEEH
KDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEYLDVWPKYLNQKVSGPKEYIN
HHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH
ALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMDLNDPQ
HHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCCCHHEEEEECCCCEECCCCCH
ADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPL
HHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEECEE
YVKDVSRQFLDVVKNNMVLTIVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGIL
EEEHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
HDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKNNKVVIQTKTKETTKLYKKEW
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCEEEEEECCCHHHHHHHCCC
>Mature Secondary Structure
MIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEECCC
KSGFLNKKVSLTITGNKNTVQDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIR
CCCCCCCEEEEEEECCCCCHHHCCCCCEEEEEEECCCCCHHHEEECCCCEEEECCCEEEH
KDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEYLDVWPKYLNQKVSGPKEYIN
HHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH
ALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMDLNDPQ
HHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCCCHHEEEEECCCCEECCCCCH
ADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPL
HHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEECEE
YVKDVSRQFLDVVKNNMVLTIVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGIL
EEEHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
HDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKNNKVVIQTKTKETTKLYKKEW
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCEEEEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA