| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835636
GI number: 15835636
Start: 127590
End: 128852
Strand: Reverse
Name: Not Available
Synonym: CPj0100
Alternate gene names: NA
Gene position: 128852-127590 (Counterclockwise)
Preceding gene: 15835637
Following gene: 15835634
Centisome position: 10.51
GC content: 36.34
Gene sequence:
>1263_bases ATGATAAAATTTTTATCTCAACTCTTTATTCGGCATTGGCCTAGAAAAGTTGTTTCCTTAGGTTTTGCCATCATCATTTG GATCCTCGTAGGACAAAGTGTTACCATCACGCGAACACTCACAAATGTCCCTGTGCGCATCGTAGACCTACATCCAGACC AAACCGTTCTTGGACTACAAAAAAGCGGATTCCTGAATAAAAAAGTCTCTTTAACAATCACTGGGAATAAAAATACCGTT CAAGACCTCCGTCCTTCAAATTTAGAGGTAGTGATCAGTGCAGCAAACCATACGGAAAGTTGGATTGCCACTATAGATAA GCATAACCTTGTCTCTGTAGATCATGAGATCAACATACGCAAAGACATCCATAGCGTTGACGCTAACGATATTTTTGTCC GACTTACACAATATGTAACCGAAGACATTTTATTAACTATAACGAAACCTATAGGGAGTCCCCCGAAAGGATATGAGTAT TTGGATGTCTGGCCGAAGTACTTGAATCAAAAAGTCAGTGGCCCCAAAGAATATATCAATGCTTTGAAAGAGCAAGGTCT TGAGCTAACCTTTAATTTGAATAAAATTTCGTTCGAAGAGTTAGAAAGAAATCGCATTGCTCAGGGAAGTCATGACGAAA TTATTTTCCCCATTCCTAAAGAATGGAAGAAAATTTTGATTCCCTTTGAAAATACCTTCATGGATCTCAATGACCCTCAA GCAGATTTTCTTCGCCTTTTATTTTTAAAAAGGGAATGCATTCCCCTAAATTTAAATTTACCGGTCTTTCTATTCTTTCC TGTAACCTTCATTCAAACGATGAATCCTCTAGAGTACAGCTTAGATCCTGTCCCTCCCATTATTCTGAATCATGGAATTC ATCAAATAAATATTCCTTTATATGTTAAGGATGTAAGTAGACAGTTTTTAGATGTCGTAAAGAACAACATGGTCTTAACA ATTGTGATGCCCTCACCACAAGACCCTTCTTCGATCAACTGGGCTATAGAATTTTTAGATGAAAAAACTTTAGAAAATAC TTTTCTTCAGACTATTATAGCCCAAGAACATGGAATTTTACACGATATAGCCCTTATTGATGAGGCTGGAATTCGTCATA GATTCCGAGAATATTTAAGAAAGCTTGCACTTTTTACAGCAGACGGTGAACCTTTAAATCTTATTGCAGAAATCAAAAAT AATAAAGTTGTGATCCAGACAAAAACAAAGGAAACAACTAAATTATATAAAAAAGAGTGGTAG
Upstream 100 bases:
>100_bases CACGCGGAGTAAAAATAGATAGATTCAAAGCGGTACTCCGCAGTATTCTTTCCCCTAAAGAACACAAAAGAAAACCTTTA TTCTCTTGGATTTGGAAACG
Downstream 100 bases:
>100_bases TGCAGACTCACTAAAATTTAGTTAGGGGAAACTTTATGTGCTTAATAGATTGCTTGGGCCAGGGCTTTGAAGCTGCAATC AACACAGTTTGTTGTTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQKSGFLNKKVSLTITGNKNTV QDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIRKDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEY LDVWPKYLNQKVSGPKEYINALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMDLNDPQ ADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPLYVKDVSRQFLDVVKNNMVLT IVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGILHDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKN NKVVIQTKTKETTKLYKKEW
Sequences:
>Translated_420_residues MIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQKSGFLNKKVSLTITGNKNTV QDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIRKDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEY LDVWPKYLNQKVSGPKEYINALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMDLNDPQ ADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPLYVKDVSRQFLDVVKNNMVLT IVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGILHDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKN NKVVIQTKTKETTKLYKKEW >Mature_420_residues MIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQKSGFLNKKVSLTITGNKNTV QDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIRKDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEY LDVWPKYLNQKVSGPKEYINALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMDLNDPQ ADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPLYVKDVSRQFLDVVKNNMVLT IVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGILHDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKN NKVVIQTKTKETTKLYKKEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48407; Mature: 48407
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEECCC KSGFLNKKVSLTITGNKNTVQDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIR CCCCCCCEEEEEEECCCCCHHHCCCCCEEEEEEECCCCCHHHEEECCCCEEEECCCEEEH KDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEYLDVWPKYLNQKVSGPKEYIN HHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH ALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMDLNDPQ HHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCCCHHEEEEECCCCEECCCCCH ADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPL HHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEECEE YVKDVSRQFLDVVKNNMVLTIVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGIL EEEHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH HDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKNNKVVIQTKTKETTKLYKKEW HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCEEEEEECCCHHHHHHHCCC >Mature Secondary Structure MIKFLSQLFIRHWPRKVVSLGFAIIIWILVGQSVTITRTLTNVPVRIVDLHPDQTVLGLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEECCC KSGFLNKKVSLTITGNKNTVQDLRPSNLEVVISAANHTESWIATIDKHNLVSVDHEINIR CCCCCCCEEEEEEECCCCCHHHCCCCCEEEEEEECCCCCHHHEEECCCCEEEECCCEEEH KDIHSVDANDIFVRLTQYVTEDILLTITKPIGSPPKGYEYLDVWPKYLNQKVSGPKEYIN HHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH ALKEQGLELTFNLNKISFEELERNRIAQGSHDEIIFPIPKEWKKILIPFENTFMDLNDPQ HHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCCCHHEEEEECCCCEECCCCCH ADFLRLLFLKRECIPLNLNLPVFLFFPVTFIQTMNPLEYSLDPVPPIILNHGIHQINIPL HHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEECEE YVKDVSRQFLDVVKNNMVLTIVMPSPQDPSSINWAIEFLDEKTLENTFLQTIIAQEHGIL EEEHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH HDIALIDEAGIRHRFREYLRKLALFTADGEPLNLIAEIKNNKVVIQTKTKETTKLYKKEW HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCEEEEEECCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA