| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835563
GI number: 15835563
Start: 38430
End: 39296
Strand: Reverse
Name: Not Available
Synonym: CPj0026
Alternate gene names: NA
Gene position: 39296-38430 (Counterclockwise)
Preceding gene: 15835564
Following gene: 15835562
Centisome position: 3.2
GC content: 41.98
Gene sequence:
>867_bases ATGTCCCATCTTATTCCTAGCCTGCGCAACTCAGTGACTTCGTATTTCCATAAACCTCAACCGATCAAACAAGCGGCTCC TTCCAAATCGATTCGAGACATTTGCAACATTGCTTACCTAATCATTATATGCGTTCTCGTCGTCGTAGTTCTTGTTGGAG CTATGCTGTGCATGTTTATTCCCTCTGTAGGAATTCCTCTTTGTTTAAGCTCATTGGCACTTCTAGTGCTCTTGAGTATT TTCAATCCGTGTCTCATTAATTGGATATCCACAAAAAAAACAAAAGAAATTGCCCCAAAAGATGCCTCTGAATCACAACC TACAAAATCTGCGTCTAGAAAAGGGAGCCCGCAACTCTCCCCACATCATGACCACGAACCAAAAAACTTCATAAGAACGC AATTAGAAAAAGGCGTCAACTATGTAACAAACAAATTCAAAAGTGGTGAAGAGAGTCCTCACATCTCTGATGAACACCAT TCACCTAGGCAAAGCAAGCGTTCTTCTGAAATTGAATCCTCTGATGAATCTTCCCCTGAACTCCATCGCAAAGCCAAGGG AAAAGCACCTCATACGGCAACTACAAAAGGGTCTAAAACTTCAACAACAGAAAGCTCAAAGAAGAAGAAGAAAACTAAAC ACTCCTTACATAGAACGACAAGTAGCATACATAAGAGATCAGCACCAAAACCCATGGTTCCGTCGAAAAAAAGAAAACCT GTGCTATTGAAAAAAACCGTCCCCCTCCCTATAGAAGATCTAGAACATCAATCATCAGGCAATGAGAGTTCTGATTCTTC ATCTCCTCCACCCGTACAACGGAAAGCGATACTCCCTTGGTTCTGCAAGCAACCGACAGACCCATAA
Upstream 100 bases:
>100_bases ATTAAGGTAGATTTAATGCGTATAAAAAAGTCTGTATATTTACAAACAGACCTTGAATACATAAGCTGTTCTTTTCAGAG AGCTTTAATCTAACTTTGCT
Downstream 100 bases:
>100_bases CTATCTTGCGATTCCTATAAATATGAAGACAACAATGCAGGAGTTATAAGAAAAACAAAATTTTAAATGATAAAAAAGTT GTCATTCAAAAGTTGTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSHLIPSLRNSVTSYFHKPQPIKQAAPSKSIRDICNIAYLIIICVLVVVVLVGAMLCMFIPSVGIPLCLSSLALLVLLSI FNPCLINWISTKKTKEIAPKDASESQPTKSASRKGSPQLSPHHDHEPKNFIRTQLEKGVNYVTNKFKSGEESPHISDEHH SPRQSKRSSEIESSDESSPELHRKAKGKAPHTATTKGSKTSTTESSKKKKKTKHSLHRTTSSIHKRSAPKPMVPSKKRKP VLLKKTVPLPIEDLEHQSSGNESSDSSSPPPVQRKAILPWFCKQPTDP
Sequences:
>Translated_288_residues MSHLIPSLRNSVTSYFHKPQPIKQAAPSKSIRDICNIAYLIIICVLVVVVLVGAMLCMFIPSVGIPLCLSSLALLVLLSI FNPCLINWISTKKTKEIAPKDASESQPTKSASRKGSPQLSPHHDHEPKNFIRTQLEKGVNYVTNKFKSGEESPHISDEHH SPRQSKRSSEIESSDESSPELHRKAKGKAPHTATTKGSKTSTTESSKKKKKTKHSLHRTTSSIHKRSAPKPMVPSKKRKP VLLKKTVPLPIEDLEHQSSGNESSDSSSPPPVQRKAILPWFCKQPTDP >Mature_287_residues SHLIPSLRNSVTSYFHKPQPIKQAAPSKSIRDICNIAYLIIICVLVVVVLVGAMLCMFIPSVGIPLCLSSLALLVLLSIF NPCLINWISTKKTKEIAPKDASESQPTKSASRKGSPQLSPHHDHEPKNFIRTQLEKGVNYVTNKFKSGEESPHISDEHHS PRQSKRSSEIESSDESSPELHRKAKGKAPHTATTKGSKTSTTESSKKKKKTKHSLHRTTSSIHKRSAPKPMVPSKKRKPV LLKKTVPLPIEDLEHQSSGNESSDSSSPPPVQRKAILPWFCKQPTDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31829; Mature: 31698
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLIPSLRNSVTSYFHKPQPIKQAAPSKSIRDICNIAYLIIICVLVVVVLVGAMLCMFI CCCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSVGIPLCLSSLALLVLLSIFNPCLINWISTKKTKEIAPKDASESQPTKSASRKGSPQLS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC PHHDHEPKNFIRTQLEKGVNYVTNKFKSGEESPHISDEHHSPRQSKRSSEIESSDESSPE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH LHRKAKGKAPHTATTKGSKTSTTESSKKKKKTKHSLHRTTSSIHKRSAPKPMVPSKKRKP HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VLLKKTVPLPIEDLEHQSSGNESSDSSSPPPVQRKAILPWFCKQPTDP EEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCC >Mature Secondary Structure SHLIPSLRNSVTSYFHKPQPIKQAAPSKSIRDICNIAYLIIICVLVVVVLVGAMLCMFI CCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSVGIPLCLSSLALLVLLSIFNPCLINWISTKKTKEIAPKDASESQPTKSASRKGSPQLS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC PHHDHEPKNFIRTQLEKGVNYVTNKFKSGEESPHISDEHHSPRQSKRSSEIESSDESSPE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH LHRKAKGKAPHTATTKGSKTSTTESSKKKKKTKHSLHRTTSSIHKRSAPKPMVPSKKRKP HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VLLKKTVPLPIEDLEHQSSGNESSDSSSPPPVQRKAILPWFCKQPTDP EEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA