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The map label for this gene is pmp_2_1

Identifier: 15835548

GI number: 15835548

Start: 18263

End: 20401

Strand: Direct

Name: pmp_2_1

Synonym: CPj0013A

Alternate gene names: 15835548

Gene position: 18263-20401 (Clockwise)

Preceding gene: 15835547

Following gene: 15835549

Centisome position: 1.49

GC content: 43.29

Gene sequence:

>2139_bases
ATGAAGATTCCACTCCGCTTTTTATTGATATCATTAGTACCTACGCTTTCTATGTCGAATTTATTAGGAGCTGCTACTAC
CGAAGAGTTATCGGCTAGCAATAGCTTCGATGGAACTACATCAACAACAAGCTTTTCTAGTAAAACATCATCGGCTACAG
ATGGCACCAATTATGTTTTTAAAGATTCTGTAGTTATAGAAAATGTACCCAAAACAGGGGAAACTCAGTCTACTAGTTGT
TTTAAAAATGACGCTGCAGCTGGAGATCTAAATTTCTTAGGAGGGGGATTTTCTTTCACATTTAGCAATATCGATGCAAC
CACGGCTTCTGGAGCTGCTATTGGAAGTGAAGCAGCTAATAAGACAGTCACGTTATCAGGATTTTCGGCACTTTCTTTTC
TTAAATCCCCAGCAAGTACAGTGACTAATGGATTGGGAGCTATCAATGTTAAAGGGAATTTAAGCCTATTGGATAATGAT
AAGGTATTGATTCAGGACAATTTCTCAACAGGAGATGGCGGAGCAATTAATTGTGCAGGCTCCTTGAAGATCGCAAACAA
TAAGTCCCTTTCTTTTATTGGAAATAGTTCTTCAACACGTGGCGGAGCGATTCATACCAAAAACCTCACACTATCTTCTG
GTGGGGAAACTCTATTTCAGGGGAATACAGCGCCTACGGCTGCTGGTAAAGGAGGTGCTATCGCGATTGCAGACTCTGGC
ACCCTATCCATTTCTGGAGACAGTGGCGACATTATCTTTGAAGGCAATACGATAGGAGCTACAGGAACCGTCTCTCATAG
TGCTATTGATTTAGGAACTAGCGCTAAGATAACTGCGTTACGTGCTGCGCAAGGACATACGATATACTTTTATGATCCGA
TTACTGTAACAGGATCGACATCTGTTGCTGATGCTCTCAATATTAATAGCCCTGATACTGGAGATAACAAAGAGTATACG
GGAACCATAGTCTTTTCTGGAGAGAAGCTCACGGAGGCAGAAGCTAAAGATGAGAAGAACCGCACTTCTAAATTACTTCA
AAACGTTGCTTTTAAAAATGGGACTGTAGTTTTAAAAGGTGATGTCGTTTTAAGTGCGAACGGTTTCTCTCAGGATGCAA
ACTCTAAGTTGATTATGGATTTAGGGACGTCGTTGGTTGCAAACACCGAAAGTATCGAGTTAACGAATTTGGAAATTAAT
ATAGACTCTCTCAGGAACGGGAAAAAGATAAAACTCAGTGCTGCCACAGCTCAGAAAGATATTCGTATAGATCGTCCTGT
TGTACTGGCAATTAGCGATGAGAGTTTTTATCAAAATGGCTTTTTGAATGAGGACCATTCCTATGATGGGATTCTTGAGT
TAGATGCTGGGAAAGACATCGTGATTTCTGCAGATTCTCGCAGTATAGATGCTGTACAATCTCCGTATGGCTATCAGGGA
AAGTGGACGATCAATTGGTCTACTGATGATAAGAAAGCTACGGTTTCTTGGGCGAAGCAGAGTTTTAATCCCACTGCTGA
GCAGGAGGCTCCGTTAGTTCCTAATCTTCTTTGGGGTTCTTTTATAGATGTTCGTTCCTTCCAGAATTTTATAGAGCTAG
GTACTGAAGGTGCTCCTTACGAAAAGAGATTTTGGGTTGCAGGCATTTCCAATGTTTTGCATAGGAGCGGTCGTGAAAAT
CAAAGGAAATTCCGTCATGTGAGTGGAGGTGCTGTAGTAGGTGCTAGCACGAGGATGCCGGGTGGTGATACCTTGTCTCT
GGGTTTTGCTCAGCTCTTTGCGCGTGACAAAGACTACTTTATGAATACCAATTTCGCAAAGACCTACGCAGGATCTTTAC
GTTTGCAGCACGATGCTTCCCTATACTCTGTGGTGAGTATCCTTTTAGGAGAGGGAGGACTCCGCGAGATCCTGTTGCCT
TATGTTTCCAAGACTCTGCCGTGCTCTTTCTATGGGCAGCTTAGCTACGGCCATACGGATCATCGCATGAAGACCGAGTC
TCTACCCCCCCCCCCCCGACGCTCTCGACGGATCATACTTCTTGGGGAGGATATGTCTGGGCTGGAGAGCTGGGAACTCG
AGTTGCTGTTGAAAATACCAGCGGCAGAGGATTTTTCCAAGAGTACACTCCATTTGTAA

Upstream 100 bases:

>100_bases
ATTTTAACGTGCGTATCATTTGTGACTAAGAGATAGACTTGCTTTCTTTATCTATCTTCTGTATTGGAAAGAAAGCCCCT
TGAGGGAAAAAAAGGTTGTT

Downstream 100 bases:

>100_bases
AAGTCCAAGCTGTTTACGCTCGCCAAGATAGCTTTGTAGAACTAGGAGCTATCAGTCGTGATTTTAGTGATTCGCATCTT
TATAACCTTGCGATTCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer membrane protein 7; Polymorphic membrane protein 2 [H]

Number of amino acids: Translated: 712; Mature: 712

Protein sequence:

>712_residues
MKIPLRFLLISLVPTLSMSNLLGAATTEELSASNSFDGTTSTTSFSSKTSSATDGTNYVFKDSVVIENVPKTGETQSTSC
FKNDAAAGDLNFLGGGFSFTFSNIDATTASGAAIGSEAANKTVTLSGFSALSFLKSPASTVTNGLGAINVKGNLSLLDND
KVLIQDNFSTGDGGAINCAGSLKIANNKSLSFIGNSSSTRGGAIHTKNLTLSSGGETLFQGNTAPTAAGKGGAIAIADSG
TLSISGDSGDIIFEGNTIGATGTVSHSAIDLGTSAKITALRAAQGHTIYFYDPITVTGSTSVADALNINSPDTGDNKEYT
GTIVFSGEKLTEAEAKDEKNRTSKLLQNVAFKNGTVVLKGDVVLSANGFSQDANSKLIMDLGTSLVANTESIELTNLEIN
IDSLRNGKKIKLSAATAQKDIRIDRPVVLAISDESFYQNGFLNEDHSYDGILELDAGKDIVISADSRSIDAVQSPYGYQG
KWTINWSTDDKKATVSWAKQSFNPTAEQEAPLVPNLLWGSFIDVRSFQNFIELGTEGAPYEKRFWVAGISNVLHRSGREN
QRKFRHVSGGAVVGASTRMPGGDTLSLGFAQLFARDKDYFMNTNFAKTYAGSLRLQHDASLYSVVSILLGEGGLREILLP
YVSKTLPCSFYGQLSYGHTDHRMKTESLPPPPRRSRRIILLGEDMSGLESWELELLLKIPAAEDFSKSTLHL

Sequences:

>Translated_712_residues
MKIPLRFLLISLVPTLSMSNLLGAATTEELSASNSFDGTTSTTSFSSKTSSATDGTNYVFKDSVVIENVPKTGETQSTSC
FKNDAAAGDLNFLGGGFSFTFSNIDATTASGAAIGSEAANKTVTLSGFSALSFLKSPASTVTNGLGAINVKGNLSLLDND
KVLIQDNFSTGDGGAINCAGSLKIANNKSLSFIGNSSSTRGGAIHTKNLTLSSGGETLFQGNTAPTAAGKGGAIAIADSG
TLSISGDSGDIIFEGNTIGATGTVSHSAIDLGTSAKITALRAAQGHTIYFYDPITVTGSTSVADALNINSPDTGDNKEYT
GTIVFSGEKLTEAEAKDEKNRTSKLLQNVAFKNGTVVLKGDVVLSANGFSQDANSKLIMDLGTSLVANTESIELTNLEIN
IDSLRNGKKIKLSAATAQKDIRIDRPVVLAISDESFYQNGFLNEDHSYDGILELDAGKDIVISADSRSIDAVQSPYGYQG
KWTINWSTDDKKATVSWAKQSFNPTAEQEAPLVPNLLWGSFIDVRSFQNFIELGTEGAPYEKRFWVAGISNVLHRSGREN
QRKFRHVSGGAVVGASTRMPGGDTLSLGFAQLFARDKDYFMNTNFAKTYAGSLRLQHDASLYSVVSILLGEGGLREILLP
YVSKTLPCSFYGQLSYGHTDHRMKTESLPPPPRRSRRIILLGEDMSGLESWELELLLKIPAAEDFSKSTLHL
>Mature_712_residues
MKIPLRFLLISLVPTLSMSNLLGAATTEELSASNSFDGTTSTTSFSSKTSSATDGTNYVFKDSVVIENVPKTGETQSTSC
FKNDAAAGDLNFLGGGFSFTFSNIDATTASGAAIGSEAANKTVTLSGFSALSFLKSPASTVTNGLGAINVKGNLSLLDND
KVLIQDNFSTGDGGAINCAGSLKIANNKSLSFIGNSSSTRGGAIHTKNLTLSSGGETLFQGNTAPTAAGKGGAIAIADSG
TLSISGDSGDIIFEGNTIGATGTVSHSAIDLGTSAKITALRAAQGHTIYFYDPITVTGSTSVADALNINSPDTGDNKEYT
GTIVFSGEKLTEAEAKDEKNRTSKLLQNVAFKNGTVVLKGDVVLSANGFSQDANSKLIMDLGTSLVANTESIELTNLEIN
IDSLRNGKKIKLSAATAQKDIRIDRPVVLAISDESFYQNGFLNEDHSYDGILELDAGKDIVISADSRSIDAVQSPYGYQG
KWTINWSTDDKKATVSWAKQSFNPTAEQEAPLVPNLLWGSFIDVRSFQNFIELGTEGAPYEKRFWVAGISNVLHRSGREN
QRKFRHVSGGAVVGASTRMPGGDTLSLGFAQLFARDKDYFMNTNFAKTYAGSLRLQHDASLYSVVSILLGEGGLREILLP
YVSKTLPCSFYGQLSYGHTDHRMKTESLPPPPRRSRRIILLGEDMSGLESWELELLLKIPAAEDFSKSTLHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 75570; Mature: 75570

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPLRFLLISLVPTLSMSNLLGAATTEELSASNSFDGTTSTTSFSSKTSSATDGTNYVF
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
KDSVVIENVPKTGETQSTSCFKNDAAAGDLNFLGGGFSFTFSNIDATTASGAAIGSEAAN
ECCEEEECCCCCCCCCCCHHHCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCC
KTVTLSGFSALSFLKSPASTVTNGLGAINVKGNLSLLDNDKVLIQDNFSTGDGGAINCAG
CEEEEECHHHHHHHHCCHHHHHCCCEEEEECCCEEEECCCEEEEEECCCCCCCCEEEEEE
SLKIANNKSLSFIGNSSSTRGGAIHTKNLTLSSGGETLFQGNTAPTAAGKGGAIAIADSG
EEEEECCCEEEEEECCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCC
TLSISGDSGDIIFEGNTIGATGTVSHSAIDLGTSAKITALRAAQGHTIYFYDPITVTGST
EEEEECCCCCEEEECCEECCCCCCCCCEEECCCCCEEEEEEECCCCEEEEECCEEEECCC
SVADALNINSPDTGDNKEYTGTIVFSGEKLTEAEAKDEKNRTSKLLQNVAFKNGTVVLKG
CHHHEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
DVVLSANGFSQDANSKLIMDLGTSLVANTESIELTNLEINIDSLRNGKKIKLSAATAQKD
CEEEEECCCCCCCCCEEEEECCCHHEECCCEEEEEEEEEEHHHCCCCCEEEEEECCCCCC
IRIDRPVVLAISDESFYQNGFLNEDHSYDGILELDAGKDIVISADSRSIDAVQSPYGYQG
EECCCCEEEEECCCCHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHCCCCCCCC
KWTINWSTDDKKATVSWAKQSFNPTAEQEAPLVPNLLWGSFIDVRSFQNFIELGTEGAPY
EEEEEECCCCCEEEHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCC
EKRFWVAGISNVLHRSGRENQRKFRHVSGGAVVGASTRMPGGDTLSLGFAQLFARDKDYF
CCEEEEHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCCCEEHHHHHHHHHCCCCCE
MNTNFAKTYAGSLRLQHDASLYSVVSILLGEGGLREILLPYVSKTLPCSFYGQLSYGHTD
ECCCCHHEEECCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
HRMKTESLPPPPRRSRRIILLGEDMSGLESWELELLLKIPAAEDFSKSTLHL
CCEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKIPLRFLLISLVPTLSMSNLLGAATTEELSASNSFDGTTSTTSFSSKTSSATDGTNYVF
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
KDSVVIENVPKTGETQSTSCFKNDAAAGDLNFLGGGFSFTFSNIDATTASGAAIGSEAAN
ECCEEEECCCCCCCCCCCHHHCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCC
KTVTLSGFSALSFLKSPASTVTNGLGAINVKGNLSLLDNDKVLIQDNFSTGDGGAINCAG
CEEEEECHHHHHHHHCCHHHHHCCCEEEEECCCEEEECCCEEEEEECCCCCCCCEEEEEE
SLKIANNKSLSFIGNSSSTRGGAIHTKNLTLSSGGETLFQGNTAPTAAGKGGAIAIADSG
EEEEECCCEEEEEECCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCC
TLSISGDSGDIIFEGNTIGATGTVSHSAIDLGTSAKITALRAAQGHTIYFYDPITVTGST
EEEEECCCCCEEEECCEECCCCCCCCCEEECCCCCEEEEEEECCCCEEEEECCEEEECCC
SVADALNINSPDTGDNKEYTGTIVFSGEKLTEAEAKDEKNRTSKLLQNVAFKNGTVVLKG
CHHHEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
DVVLSANGFSQDANSKLIMDLGTSLVANTESIELTNLEINIDSLRNGKKIKLSAATAQKD
CEEEEECCCCCCCCCEEEEECCCHHEECCCEEEEEEEEEEHHHCCCCCEEEEEECCCCCC
IRIDRPVVLAISDESFYQNGFLNEDHSYDGILELDAGKDIVISADSRSIDAVQSPYGYQG
EECCCCEEEEECCCCHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHCCCCCCCC
KWTINWSTDDKKATVSWAKQSFNPTAEQEAPLVPNLLWGSFIDVRSFQNFIELGTEGAPY
EEEEEECCCCCEEEHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCC
EKRFWVAGISNVLHRSGRENQRKFRHVSGGAVVGASTRMPGGDTLSLGFAQLFARDKDYF
CCEEEEHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCCCEEHHHHHHHHHCCCCCE
MNTNFAKTYAGSLRLQHDASLYSVVSILLGEGGLREILLPYVSKTLPCSFYGQLSYGHTD
ECCCCHHEEECCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
HRMKTESLPPPPRRSRRIILLGEDMSGLESWELELLLKIPAAEDFSKSTLHL
CCEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10539856; 10192388; 10684935; 10871362 [H]