Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835547

GI number: 15835547

Start: 16323

End: 17894

Strand: Direct

Name: Not Available

Synonym: CPj0012

Alternate gene names: NA

Gene position: 16323-17894 (Clockwise)

Preceding gene: 15835546

Following gene: 15835548

Centisome position: 1.33

GC content: 38.42

Gene sequence:

>1572_bases
ATGTACCAGGAGAATCTAAGATTGTTGGAAAGGCTTCTTTATAATAGTGTTCAAAAGAGCTATGCGGATCGGCTGTTTTC
CTATGAAAAGACAAAGATGGTGCACGATACTCCGCTGATTCCTTGGGAAGAGGATAAGGAAAAATGTGCTGAAGCTGAGA
AAGCTTTCTTAGAGCAACAGAAGATTCTCCTAGATTATGGAAAATCTATCTTTTGGCTGAATGAGAACGATGAGATCAAT
TTAAACGATCCTTGGAGTTGGGGTCTTAATACGGTGAGGACTAGGAAAGTATTCCAAGAGGTTGACGACAGTGAACGTTG
GAATCATAAGGTACTCATTCAAAAACTCGAGGACGATTATGAGAAACTTCTAGAGGAAAGTTCAAAAGAGTCTACTGAAG
CAAATAAGAAGCTTTTATCTGACTTAGTAGATCGTCTTGAAGATGCTAAGACAAAATTTTTCCTGAAGAAACAGGAGGAG
GTGGAGACTCGCGTTAAGGATCTTAGAGCTCGATATGGAGGCACAGTAGATCCTAAGCAGGATACGGAAGCTAAGAAGAA
AGTCGAATTGGAGGCTAGCTTAGAAACCTTTTTAGATTCCATCGAATCAGAGCTAGTACAGTGTTTAGAAGATCAAGATA
TATATTGGAAAGAACAGGATGTCAAAGATCTAGCACGTACGCAAGAGCTCGAGGAACAAGATATTGAAGCGAAGAGGGAA
GAAGCTGCCGAAGACCTAAGAAGTCTTAATGAGCGTTTAAAGAAGTCAAAAACTATGTTAGATAGGGCTAAATGGCATAT
TGAAAATGCTGAGGACAGTATTACCTGGTGGACTAGTCAGATAGAAATGAAGGATATGAAAGCAAGACTGAAGATCTTAA
AAGAAGATATAACAAGTGTTCTACCTGAAATAGATGAGATTGAAACGTGTTTAAGCTTAGAGGAGCTTCCTTTGCTTACG
ACCAGGGAACTCTTAACTAAGTCCTACCTAAAGTTTAAGATTTGTTCGGAAACACTATTAAAAATGACTTCTGTGTTTGA
GAACAATATCTATGTTCAGGAGTACGAGGTTCAGCTGCAAAATCTAGGGTTTAAGTTACAAGGTATATCTCAGAGATTCG
GAAAGAAACAAGACGATTTTGCGAATCTAGAGGAACAGGTTGCTTTGCAAAAGAAACGACTCAGAGAGCTCACTCAGAAT
TTTGAAATACAAGGATTCAATTTCATGAAAGAAGATTTTAAGGCAGCCGCTAAAGATCTTTATATAAGAAGTACAGCTGA
ACAAAAGATGAACTTTGATGTGCCTTGCATGGAGCTCTTCCGTAGGTATCATGAGGAGGTCAACAAGCCGCTTCTTGAGT
TGATGTACAATTGTGCAGACAGTTATAGAGATGCTAAGAAAAAGCTTTGCTCTCTACGTCTTGATGAAAAAGAGTTATTA
CAAAAAGAAATCAAGAAAGAGGAATTTTATCAAAAGAAACAACAAAGGCATGCAGATAGATCACGTCATACTACGTATCA
AAAGCTACGAATTGCTGAAGAGCTTGCTCTTGAGCTGAAGAAGAAAATCTAA

Upstream 100 bases:

>100_bases
AAAAAGCTAAAGCAGTTGTGCATGAGTTTATAGTTCTGACTACAATGGCTAGGGAATTAGAGTTTTTTTTCTAAAAAATA
AATATGGTTTATTAAAGGGG

Downstream 100 bases:

>100_bases
TCACTAAAGCCTAGTTAAGGGTTCTTTTGAATTGGGCCCTGTGTTTCCATTTCTCTAGGGATCCTCTTAGCTGAGGATCT
TCTTTGTACCTCTTTTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MYQENLRLLERLLYNSVQKSYADRLFSYEKTKMVHDTPLIPWEEDKEKCAEAEKAFLEQQKILLDYGKSIFWLNENDEIN
LNDPWSWGLNTVRTRKVFQEVDDSERWNHKVLIQKLEDDYEKLLEESSKESTEANKKLLSDLVDRLEDAKTKFFLKKQEE
VETRVKDLRARYGGTVDPKQDTEAKKKVELEASLETFLDSIESELVQCLEDQDIYWKEQDVKDLARTQELEEQDIEAKRE
EAAEDLRSLNERLKKSKTMLDRAKWHIENAEDSITWWTSQIEMKDMKARLKILKEDITSVLPEIDEIETCLSLEELPLLT
TRELLTKSYLKFKICSETLLKMTSVFENNIYVQEYEVQLQNLGFKLQGISQRFGKKQDDFANLEEQVALQKKRLRELTQN
FEIQGFNFMKEDFKAAAKDLYIRSTAEQKMNFDVPCMELFRRYHEEVNKPLLELMYNCADSYRDAKKKLCSLRLDEKELL
QKEIKKEEFYQKKQQRHADRSRHTTYQKLRIAEELALELKKKI

Sequences:

>Translated_523_residues
MYQENLRLLERLLYNSVQKSYADRLFSYEKTKMVHDTPLIPWEEDKEKCAEAEKAFLEQQKILLDYGKSIFWLNENDEIN
LNDPWSWGLNTVRTRKVFQEVDDSERWNHKVLIQKLEDDYEKLLEESSKESTEANKKLLSDLVDRLEDAKTKFFLKKQEE
VETRVKDLRARYGGTVDPKQDTEAKKKVELEASLETFLDSIESELVQCLEDQDIYWKEQDVKDLARTQELEEQDIEAKRE
EAAEDLRSLNERLKKSKTMLDRAKWHIENAEDSITWWTSQIEMKDMKARLKILKEDITSVLPEIDEIETCLSLEELPLLT
TRELLTKSYLKFKICSETLLKMTSVFENNIYVQEYEVQLQNLGFKLQGISQRFGKKQDDFANLEEQVALQKKRLRELTQN
FEIQGFNFMKEDFKAAAKDLYIRSTAEQKMNFDVPCMELFRRYHEEVNKPLLELMYNCADSYRDAKKKLCSLRLDEKELL
QKEIKKEEFYQKKQQRHADRSRHTTYQKLRIAEELALELKKKI
>Mature_523_residues
MYQENLRLLERLLYNSVQKSYADRLFSYEKTKMVHDTPLIPWEEDKEKCAEAEKAFLEQQKILLDYGKSIFWLNENDEIN
LNDPWSWGLNTVRTRKVFQEVDDSERWNHKVLIQKLEDDYEKLLEESSKESTEANKKLLSDLVDRLEDAKTKFFLKKQEE
VETRVKDLRARYGGTVDPKQDTEAKKKVELEASLETFLDSIESELVQCLEDQDIYWKEQDVKDLARTQELEEQDIEAKRE
EAAEDLRSLNERLKKSKTMLDRAKWHIENAEDSITWWTSQIEMKDMKARLKILKEDITSVLPEIDEIETCLSLEELPLLT
TRELLTKSYLKFKICSETLLKMTSVFENNIYVQEYEVQLQNLGFKLQGISQRFGKKQDDFANLEEQVALQKKRLRELTQN
FEIQGFNFMKEDFKAAAKDLYIRSTAEQKMNFDVPCMELFRRYHEEVNKPLLELMYNCADSYRDAKKKLCSLRLDEKELL
QKEIKKEEFYQKKQQRHADRSRHTTYQKLRIAEELALELKKKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62461; Mature: 62461

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQENLRLLERLLYNSVQKSYADRLFSYEKTKMVHDTPLIPWEEDKEKCAEAEKAFLEQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
KILLDYGKSIFWLNENDEINLNDPWSWGLNTVRTRKVFQEVDDSERWNHKVLIQKLEDDY
HHHHHCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
EKLLEESSKESTEANKKLLSDLVDRLEDAKTKFFLKKQEEVETRVKDLRARYGGTVDPKQ
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DTEAKKKVELEASLETFLDSIESELVQCLEDQDIYWKEQDVKDLARTQELEEQDIEAKRE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EAAEDLRSLNERLKKSKTMLDRAKWHIENAEDSITWWTSQIEMKDMKARLKILKEDITSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPEIDEIETCLSLEELPLLTTRELLTKSYLKFKICSETLLKMTSVFENNIYVQEYEVQLQ
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
NLGFKLQGISQRFGKKQDDFANLEEQVALQKKRLRELTQNFEIQGFNFMKEDFKAAAKDL
HCCCCEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
YIRSTAEQKMNFDVPCMELFRRYHEEVNKPLLELMYNCADSYRDAKKKLCSLRLDEKELL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QKEIKKEEFYQKKQQRHADRSRHTTYQKLRIAEELALELKKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYQENLRLLERLLYNSVQKSYADRLFSYEKTKMVHDTPLIPWEEDKEKCAEAEKAFLEQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
KILLDYGKSIFWLNENDEINLNDPWSWGLNTVRTRKVFQEVDDSERWNHKVLIQKLEDDY
HHHHHCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
EKLLEESSKESTEANKKLLSDLVDRLEDAKTKFFLKKQEEVETRVKDLRARYGGTVDPKQ
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DTEAKKKVELEASLETFLDSIESELVQCLEDQDIYWKEQDVKDLARTQELEEQDIEAKRE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EAAEDLRSLNERLKKSKTMLDRAKWHIENAEDSITWWTSQIEMKDMKARLKILKEDITSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPEIDEIETCLSLEELPLLTTRELLTKSYLKFKICSETLLKMTSVFENNIYVQEYEVQLQ
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
NLGFKLQGISQRFGKKQDDFANLEEQVALQKKRLRELTQNFEIQGFNFMKEDFKAAAKDL
HCCCCEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
YIRSTAEQKMNFDVPCMELFRRYHEEVNKPLLELMYNCADSYRDAKKKLCSLRLDEKELL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QKEIKKEEFYQKKQQRHADRSRHTTYQKLRIAEELALELKKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA