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The map label for this gene is gatC

Identifier: 15835537

GI number: 15835537

Start: 573

End: 878

Strand: Direct

Name: gatC

Synonym: CPj0002

Alternate gene names: 15835537

Gene position: 573-878 (Clockwise)

Preceding gene: NA

Following gene: 15835538

Centisome position: 0.05

GC content: 38.56

Gene sequence:

>306_bases
ATGGAGCAATTTCATTTGGATAGGGAAGAAATTTTACTTTTGGCAAAGGCCTCAGCACTACAACTTTCTGAAGAGCTTAT
CCAGGAGTATCAAACTTCTTTAAGCGCTGTGATTACTTCTATGAAAGAAGCTCTTGCCATAGAGATTGATGATGCGGATT
CATGCGAATCTCTTTTTATGCATGTAGTAAATGTTGAAGATTTGAGAGAAGATTCGGTGACCTCTGATTTCAATCGAGAG
GAATTTTTGCGTAATGTTCCAGAGTCTTTAGGGGGATTAGTGAAAGTTCCTGCGGTAATCAAGTAA

Upstream 100 bases:

>100_bases
AGTTCAGAATAAAAACTTCAATTTTTTAAGTTTAGATAATCTTTCTTTACTTGCATTGAGAAAAGAGCATATTTTTATAA
GCCGCAATTTAGGATAACAT

Downstream 100 bases:

>100_bases
GGGAGTCTGAAAAATTATGTATCGATATAGTGCTTTAGAATTAGCAAAAGCTGTGACTTTAGGGGAACTGACAGCCACAG
GGGTGACTCAACATTTTTTT

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Glu-ADT subunit C

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MEQFHLDREEILLLAKASALQLSEELIQEYQTSLSAVITSMKEALAIEIDDADSCESLFMHVVNVEDLREDSVTSDFNRE
EFLRNVPESLGGLVKVPAVIK

Sequences:

>Translated_101_residues
MEQFHLDREEILLLAKASALQLSEELIQEYQTSLSAVITSMKEALAIEIDDADSCESLFMHVVNVEDLREDSVTSDFNRE
EFLRNVPESLGGLVKVPAVIK
>Mature_101_residues
MEQFHLDREEILLLAKASALQLSEELIQEYQTSLSAVITSMKEALAIEIDDADSCESLFMHVVNVEDLREDSVTSDFNRE
EFLRNVPESLGGLVKVPAVIK

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_CHLPN (Q9Z9G8)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   B86491
- PIR:   G72130
- RefSeq:   NP_224215.1
- RefSeq:   NP_300061.1
- RefSeq:   NP_445312.1
- RefSeq:   NP_876279.1
- ProteinModelPortal:   Q9Z9G8
- SMR:   Q9Z9G8
- PHCI-2DPAGE:   Q9Z9G8
- GeneID:   1466686
- GeneID:   895049
- GeneID:   918790
- GeneID:   963138
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0773
- KEGG:   cpn:CPn0002
- KEGG:   cpt:CpB0003
- TIGR:   CP_0773
- HOGENOM:   HBG056958
- OMA:   EEFLTNV
- ProtClustDB:   PRK00034
- BioCyc:   CPNE115711:CP_0773-MONOMER
- BioCyc:   CPNE115713:CPN0002-MONOMER
- BioCyc:   CPNE138677:CPJ0002-MONOMER
- BioCyc:   CPNE182082:CPB0003-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11353; Mature: 11353

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQFHLDREEILLLAKASALQLSEELIQEYQTSLSAVITSMKEALAIEIDDADSCESLFM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH
HVVNVEDLREDSVTSDFNREEFLRNVPESLGGLVKVPAVIK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEQFHLDREEILLLAKASALQLSEELIQEYQTSLSAVITSMKEALAIEIDDADSCESLFM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH
HVVNVEDLREDSVTSDFNREEFLRNVPESLGGLVKVPAVIK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362