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Identifier: 16752561

GI number: 16752561

Start: 279849

End: 280628

Strand: Direct

Name: Not Available

Synonym: CP0272

Alternate gene names: 16752561

Gene position: 279849-280628 (Clockwise)

Preceding gene: 16752557

Following gene: 16752562

Centisome position: 22.75

GC content: 41.15

Gene sequence:

>780_bases
ATGATAAAACAAATAGGCCGTTTTTTTAGAGCATTTATTTTTATAATGCCTTTATCTTTAACAAGTTGTGAGTCTAAAAT
CGATCGAAATCGCATCTGGATTGTAGGTACGAATGCTACATATCCTCCTTTTGAGTATGTGGATGCTCAGGGGGAAGTTG
TAGGTTTCGATATAGATTTGGCAAAGGCAATTAGTGAAAAACTTGGCAAGCAATTGGAAGTTAGAGAATTCGCTTTCGAT
GCTTTAATTTTAAATTTAAAAAAACATCGTATCGATGCAATTTTAGCAGGAATGTCCATTACTCCTTCGCGTCAGAAGGA
AATCGCCCTGCTTCCCTATTATGGCGATGAGGTTCAAGAGCTGATGGTGGTTTCTAAGCGGTCTTTAGAGACCCCTGTGC
TTCCCCTAACACAGCATTCTTCTGTTGCTGTTCAGACAGGAACGTTTCAGGAGCATTATCTTTTATCTCAGCCCGGAATT
TGTGTCCGTTCTTTTGATAGCACCTTGGAGGTGATTATGGAAGTTCGTTATGGGAAATCTCCGGTTGCCGTTCTAGAACC
CTCGGTAGGACGTGTCGTTCTTAAAGACTTCCCTAATCTTGTTGCAACAAGATTAGAGCTCCCTCCTGAATGTTGGGTGT
TGGGCTGTGGTCTCGGCGTAGCTAAAGATCGTCCTGAAGAAATACAAACGATTCAACAAGCGATTACAGATTTAAAGAGC
GAAGGGGTGATTCAATCTTTAACCAAGAAATGGCAACTTTCTGAAGTTGCTTACGAATAG

Upstream 100 bases:

>100_bases
AAAATTATTCAAAGTTAAAACTTTTTCGAGTTTGATGTATTTATTTTTTTATGTAAACTTTAACACATGATAGAATTTAG
CGTATAGAGCGCAAACTTTC

Downstream 100 bases:

>100_bases
AGGGTATTCTTATGGCAACCTCTGTTCCTGTAACTTCATCTACTTCTGTAGGAGAGGCTAACTCCTCCAACGAAAGATTT
ACTGAACGAACATCGCGAAT

Product: amino acid ABC transporter periplasmic amino acid-binding protein

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MIKQIGRFFRAFIFIMPLSLTSCESKIDRNRIWIVGTNATYPPFEYVDAQGEVVGFDIDLAKAISEKLGKQLEVREFAFD
ALILNLKKHRIDAILAGMSITPSRQKEIALLPYYGDEVQELMVVSKRSLETPVLPLTQHSSVAVQTGTFQEHYLLSQPGI
CVRSFDSTLEVIMEVRYGKSPVAVLEPSVGRVVLKDFPNLVATRLELPPECWVLGCGLGVAKDRPEEIQTIQQAITDLKS
EGVIQSLTKKWQLSEVAYE

Sequences:

>Translated_259_residues
MIKQIGRFFRAFIFIMPLSLTSCESKIDRNRIWIVGTNATYPPFEYVDAQGEVVGFDIDLAKAISEKLGKQLEVREFAFD
ALILNLKKHRIDAILAGMSITPSRQKEIALLPYYGDEVQELMVVSKRSLETPVLPLTQHSSVAVQTGTFQEHYLLSQPGI
CVRSFDSTLEVIMEVRYGKSPVAVLEPSVGRVVLKDFPNLVATRLELPPECWVLGCGLGVAKDRPEEIQTIQQAITDLKS
EGVIQSLTKKWQLSEVAYE
>Mature_259_residues
MIKQIGRFFRAFIFIMPLSLTSCESKIDRNRIWIVGTNATYPPFEYVDAQGEVVGFDIDLAKAISEKLGKQLEVREFAFD
ALILNLKKHRIDAILAGMSITPSRQKEIALLPYYGDEVQELMVVSKRSLETPVLPLTQHSSVAVQTGTFQEHYLLSQPGI
CVRSFDSTLEVIMEVRYGKSPVAVLEPSVGRVVLKDFPNLVATRLELPPECWVLGCGLGVAKDRPEEIQTIQQAITDLKS
EGVIQSLTKKWQLSEVAYE

Specific function: Probably part of an ABC transporter complex involved in arginine transport. Binds arginine. Interacts with host epithelial cells, suggesting a role in host-cell adhesion during infection [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Secreted. Cell surface [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1787085, Length=219, Percent_Identity=31.5068493150685, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787088, Length=219, Percent_Identity=31.9634703196347, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1788648, Length=232, Percent_Identity=31.8965517241379, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788649, Length=228, Percent_Identity=30.2631578947368, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788228, Length=266, Percent_Identity=23.3082706766917, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 29044; Mature: 29044

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQIGRFFRAFIFIMPLSLTSCESKIDRNRIWIVGTNATYPPFEYVDAQGEVVGFDIDL
CHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCEEEECHHH
AKAISEKLGKQLEVREFAFDALILNLKKHRIDAILAGMSITPSRQKEIALLPYYGDEVQE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHH
LMVVSKRSLETPVLPLTQHSSVAVQTGTFQEHYLLSQPGICVRSFDSTLEVIMEVRYGKS
HHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHEEECCCCCEEHHHHHHHHHHHHHHCCCC
PVAVLEPSVGRVVLKDFPNLVATRLELPPECWVLGCGLGVAKDRPEEIQTIQQAITDLKS
CCEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHC
EGVIQSLTKKWQLSEVAYE
CHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKQIGRFFRAFIFIMPLSLTSCESKIDRNRIWIVGTNATYPPFEYVDAQGEVVGFDIDL
CHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCEEEECHHH
AKAISEKLGKQLEVREFAFDALILNLKKHRIDAILAGMSITPSRQKEIALLPYYGDEVQE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHH
LMVVSKRSLETPVLPLTQHSSVAVQTGTFQEHYLLSQPGICVRSFDSTLEVIMEVRYGKS
HHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHEEECCCCCEEHHHHHHHHHHHHHHCCCC
PVAVLEPSVGRVVLKDFPNLVATRLELPPECWVLGCGLGVAKDRPEEIQTIQQAITDLKS
CCEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHC
EGVIQSLTKKWQLSEVAYE
CHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]