Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16752554

GI number: 16752554

Start: 270591

End: 271493

Strand: Direct

Name: Not Available

Synonym: CP0265

Alternate gene names: NA

Gene position: 270591-271493 (Clockwise)

Preceding gene: 16752552

Following gene: 16752555

Centisome position: 22.0

GC content: 39.87

Gene sequence:

>903_bases
ATGGAGGATTGGCTAAGGAGGATAGTAGGTATGCAGATTCCAAGAAGCATTGGTACTCACGATGGTTCTTTCCATGCGGA
TGAGGTCACAGCGTGTGCTCTCCTTATTATTTTCGATCTTGTGGATGAAAATAAAATTATACGCTCTCGAGATCCTGTCG
TATTATCGAAATGTGAATATGTTTGTGATGTCGGTGGTGTTTATTCTATAGAAAACAAGCGTTTTGATCATCATCAAGTC
TCTTATGATGGATCTTGGAGTAGTGCAGGTATGATTCTGCATTATCTTAAAGAGTTTGGTTATATGGATTGTGAAGAATA
TCATTTCCTTAACAACACTTTGGTACATGGTGTGGATGAACAAGATAATGGCAGATTCTTCTCTAAGGAGGGATTTTGTT
CGTTTTCTGATATTATTAAAATTTATAATCCTCGCGAGGAAGAAGAAACTAATTCGGATGCGGATTTTTCTTGTGCTTTG
CATTTTACCATCGACTTTTTGTGTCGGCTAAGGAAGAAGTTTCAGTATGATCGAGTTTGTAGGGGGATTGTCAGAGAAGC
CATGGAAACCGAGGATATGTGTTTATATTTTGATCGTCCTTTAGCATGGCAAGAAAATTTCTTTTTTTTAGGGGGAGAGA
AGCACCCTGCAGCTTTTGTTTGTTTTCCTTCCTGCGATCAATGGATTTTACGAGGGATTCCTCCGAATTTAGATCGCCGT
ATGGAAGTTCGTGTTCCTTTCCCTGAGAATTGGGCAGGTTTGTTAGGTAAAGAGTTGTCCAAAGTATCAGGGATTCCTGG
GGCTGTGTTCTGCCATAAAGGTCTTTTCCTTTCTGTATGGACAAATAGAGAAAGTTGCCAACGTGCTTTGCGGTTAACGT
TACAAGATCGAGGGATCATATGA

Upstream 100 bases:

>100_bases
AAAGTTTCTTAGAAAATAGGGCAGAAACTTTCTCTTGGAGAGATTGAGTAAAATGTAAAGAATAGTCTTTGCAATTGAGA
ATTATTTCTCTCTGGTTACA

Downstream 100 bases:

>100_bases
CAGTATTCAAACAAATTATCGATGGATTGATAGATTGTGAAAAGGTATTTGAAAACGAAAATTTCATAGCTATAAAAGAT
CGTTTTCCTCAAGCTCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MEDWLRRIVGMQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSIENKRFDHHQV
SYDGSWSSAGMILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPREEEETNSDADFSCAL
HFTIDFLCRLRKKFQYDRVCRGIVREAMETEDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRR
MEVRVPFPENWAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII

Sequences:

>Translated_300_residues
MEDWLRRIVGMQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSIENKRFDHHQV
SYDGSWSSAGMILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPREEEETNSDADFSCAL
HFTIDFLCRLRKKFQYDRVCRGIVREAMETEDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRR
MEVRVPFPENWAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII
>Mature_300_residues
MEDWLRRIVGMQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSIENKRFDHHQV
SYDGSWSSAGMILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPREEEETNSDADFSCAL
HFTIDFLCRLRKKFQYDRVCRGIVREAMETEDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRR
MEVRVPFPENWAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII

Specific function: Unknown

COG id: COG4286

COG function: function code S; Uncharacterized conserved protein related to MYG1 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0160 (MYG1) family [H]

Homologues:

Organism=Homo sapiens, GI145275185, Length=333, Percent_Identity=30.3303303303303, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25150283, Length=324, Percent_Identity=29.0123456790123, Blast_Score=114, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6321004, Length=341, Percent_Identity=26.3929618768328, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24645226, Length=77, Percent_Identity=45.4545454545455, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24645224, Length=77, Percent_Identity=45.4545454545455, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45551849, Length=77, Percent_Identity=45.4545454545455, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003226 [H]

Pfam domain/function: PF03690 UPF0160 [H]

EC number: NA

Molecular weight: Translated: 34745; Mature: 34745

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDWLRRIVGMQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEY
CHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEEHHHHH
VCDVGGVYSIENKRFDHHQVSYDGSWSSAGMILHYLKEFGYMDCEEYHFLNNTLVHGVDE
HHCCCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCC
QDNGRFFSKEGFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRLRKKFQYDRVC
CCCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHH
RGIVREAMETEDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRR
HHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHCCCCCCCCCC
MEVRVPFPENWAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII
EEEECCCCCCHHHHHHHHHHHHCCCCCHHEECCCEEEEEECCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEDWLRRIVGMQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEY
CHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEEHHHHH
VCDVGGVYSIENKRFDHHQVSYDGSWSSAGMILHYLKEFGYMDCEEYHFLNNTLVHGVDE
HHCCCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCC
QDNGRFFSKEGFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRLRKKFQYDRVC
CCCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHH
RGIVREAMETEDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRR
HHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHCCCCCCCCCC
MEVRVPFPENWAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII
EEEECCCCCCHHHHHHHHHHHHCCCCCHHEECCCEEEEEECCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]