| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 13357895
GI number: 13357895
Start: 379425
End: 381467
Strand: Direct
Name: Not Available
Synonym: UU335
Alternate gene names: NA
Gene position: 379425-381467 (Clockwise)
Preceding gene: 13357894
Following gene: 13357896
Centisome position: 50.47
GC content: 24.03
Gene sequence:
>2043_bases ATGTTTTATATTAATTTAAGGGTGAAAACAATGATGGAAAAATTAAAAAACAACAAGACTTTGTTTTTGAATGTAGAACA AGCTCAAAAACTAGGGATTAATAACCCTTTAACACAAGAGATTTTTTTAGATGATCAAAAGTTAAAAGTTCATTTAATTA ATAGTATAAAAGATGAGTTTTACTTAAAAAAAAGTATTAGTAAAGGTTATGCTTATTTTAATAGTTTAGAACAATTTAAG ACTATGGAGCTTGATGTTTTAGATAACTATCAATTTGCAAAAATAGCAGCTACTAATTTAGATGAGTATGATCAATTAGT TTACACAAAAACTCGTCAATATTTAATTAATAAAGAATTTTGAACTAATGATGGTTTAGATGCATTTATTGGTGATGATT TTAAAAGAAAACAATTAACGAGCAAAGAAATCGTTAATCTAAAAACAAAATATGATTTATGAATACAAGAATTACATTTT AATAATGCACGAATTAGTAAACAAATTCATAATTTAAGTATTCATGGTCAAAATAAATTAGATTATGAGAAATTTTATGA TAAAAAAGCAACCCTTGAATCAAATTTAGATATTCTTCAAATTTTAATTTATTTAAGATCTTCATTACTTGAGTTAGATT TTGACGATCTTTTTAAAGATGATCAAAATAAAATAAGTATTCGTCAATTATTAGTTAATGATTTAGAATACTTGCCGTTT TCATTTCAACGTTATGATTATGAATCAAGACGTAATTTCATTAGAAACTCACGTCAATTAGTTGATACCTCAATTGATTT TGACGATCTTGAATATGATTTTTTGCACAATAAGAAACCAAAACAAGAACTAGAAAAAAATAATGAATCAATTAAAATAG CTGAATTAAAAAAATTTGAAAATTCACAATTAAGTGATGAACAACAATCTAATTTAGAAAAAGAGTTCTATAGTATTGGA AGAATTAACTGTTTTGACGAAGTTAGCGAAAATAAACAAGAATTAAACAAAGAACAATTAGTAATCGATAAAAAAAATGG GTATTTGAAGCCACGTAGTTACTTACGTCATCATGAAACTCCATTTATGGTTGACATTGAGAACCGGGTAGACTTTTTAA TGGCAGGATATGAAATTATTAAAAATGATGATCCATATGCAATTAAACAAGAAATATTAAAAAATACCATTTTAGAACAA CAAAAGCTTGTCGAACAAGATGATCATGATTTTAAAGTTAAAAATGATGATCAAGAAGCAAATGAAGAATTATTGGACAA TACTGATAAATTAGAAAATCAAGATTCTACAAGTGCTGTTGAATTTAATGATTCATCTGAAGTTACTCAAGTAGTAAAAA CGGATGAAAATGTTGATAATTTAATTAAAACTAAGCAAATAACTAGTTTTAACGATCTTAAACAAGAGCAATCATCTCAA GAAAATATTATTAAAAATGATCTTTCATCAATTCAAATTCGTTTAGATGAAATTATTAATGTACATGAAAAAGATACTAA ATTACAAACCGAACTAAATTCAATTATGATAGATAGTAATGAAAAAAATATTGATGATAGTTTAAATAATTTAAATGAAC AAATACGAATTCAAGATCAAGAATTAGAATCATCAGATAATCAAAATGTAATTATTGAAGAAGAAATTAATACCAAAAAT TTAAATAATAAAGCTGATGTTGGTGTTATGAGTGTTGAAAAAAAATATGAACCTGAAGAGGAAATGGTTAATTTTGAATT TGAAATACCTGAAAACCAAAAAGAATCAGTTAACCAAGATGTTTTAAATAGTAATAGTATTGATAATTTTAAAGAAGAAA AAGCTAAAGAAAATACTTTCTTAACACCAAAAGAAATAGAAAATAATGATTTATCATCACAAATTGAATTAACACCTGCT GATTTTGAACTTAAGACACAAGAAATTAATGACGAAACTGAACGTTTATTGGATGAATTAAATAATAATAAACCTAAAGA AAAGAAGAAATTTTGGACATGATTTAACTCAAAAAAAAGATAA
Upstream 100 bases:
>100_bases ATTAAATTAAGTTAGTAACAACTTCATGAGTTGTTATTTTTTTATTTTTTTTAGATATAATTTAATTTAGACGTATGCTA TTAATGTATAATTTTAAATA
Downstream 100 bases:
>100_bases ATAAAAAAAAGGAATTATTAATTATGAATAAAACTAATCAAATTGTGGATTTATTAACCAATAAACAAAATAATTCAATT CAAAGACGCGATAATCTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 680; Mature: 680
Protein sequence:
>680_residues MFYINLRVKTMMEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEFYLKKSISKGYAYFNSLEQFK TMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEFWTNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDLWIQELHF NNARISKQIHNLSIHGQNKLDYEKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPF SFQRYDYESRRNFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENSQLSDEQQSNLEKEFYSIG RINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPFMVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQ QKLVEQDDHDFKVKNDDQEANEELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQ ENIIKNDLSSIQIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQELESSDNQNVIIEEEINTKN LNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVLNSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPA DFELKTQEINDETERLLDELNNNKPKEKKKFWTWFNSKKR
Sequences:
>Translated_680_residues MFYINLRVKTMMEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEFYLKKSISKGYAYFNSLEQFK TMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEF*TNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDL*IQELHF NNARISKQIHNLSIHGQNKLDYEKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPF SFQRYDYESRRNFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENSQLSDEQQSNLEKEFYSIG RINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPFMVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQ QKLVEQDDHDFKVKNDDQEANEELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQ ENIIKNDLSSIQIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQELESSDNQNVIIEEEINTKN LNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVLNSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPA DFELKTQEINDETERLLDELNNNKPKEKKKFWT*FNSKKR >Mature_680_residues MFYINLRVKTMMEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEFYLKKSISKGYAYFNSLEQFK TMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEF*TNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDL*IQELHF NNARISKQIHNLSIHGQNKLDYEKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPF SFQRYDYESRRNFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENSQLSDEQQSNLEKEFYSIG RINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPFMVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQ QKLVEQDDHDFKVKNDDQEANEELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQ ENIIKNDLSSIQIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQELESSDNQNVIIEEEINTKN LNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVLNSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPA DFELKTQEINDETERLLDELNNNKPKEKKKFWT*FNSKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79990; Mature: 79990
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYINLRVKTMMEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEF CEEEEEEHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCHHHEECCCHHHHHHHHHHHHHH YLKKSISKGYAYFNSLEQFKTMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEF HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCC TNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDLIQELHFNNARISKQIHNLSIHGQNKLDY CCCCCHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEECCCCCCCH EKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPFSF HHHHCHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHH QRYDYESRRNFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENS HHCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCCCCHHHHHCCCCCEEEHHHHHHCCC QLSDEQQSNLEKEFYSIGRINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPF CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHCCCCE MVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQQKLVEQDDHDFKVKNDDQEANE EEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHH ELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQEN HHHCCHHHHCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH IIKNDLSSIQIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQEL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCHHHHHHCCCHHEEEEHHHH ESSDNQNVIIEEEINTKNLNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVL CCCCCCCEEEEECCCCCCCCCCCCCCEEEHHHCCCCHHHHEEEEEECCCCHHHHHHHHHH NSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPADFELKTQEINDETERLLDELNN CCCCCCHHHHHHHCCCCCCCCHHCCCCCCCCEEEECCCCCEEEHHHCCCHHHHHHHHHCC NKPKEKKKFWTFNSKKR CCCCHHHHEECCCCCCC >Mature Secondary Structure MFYINLRVKTMMEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEF CEEEEEEHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCHHHEECCCHHHHHHHHHHHHHH YLKKSISKGYAYFNSLEQFKTMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEF HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCC TNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDLIQELHFNNARISKQIHNLSIHGQNKLDY CCCCCHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEECCCCCCCH EKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPFSF HHHHCHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHH QRYDYESRRNFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENS HHCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCCCCHHHHHCCCCCEEEHHHHHHCCC QLSDEQQSNLEKEFYSIGRINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPF CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHCCCCE MVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQQKLVEQDDHDFKVKNDDQEANE EEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHH ELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQEN HHHCCHHHHCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH IIKNDLSSIQIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQEL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCHHHHHHCCCHHEEEEHHHH ESSDNQNVIIEEEINTKNLNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVL CCCCCCCEEEEECCCCCCCCCCCCCCEEEHHHCCCCHHHHEEEEEECCCCHHHHHHHHHH NSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPADFELKTQEINDETERLLDELNN CCCCCCHHHHHHHCCCCCCCCHHCCCCCCCCEEEECCCCCEEEHHHCCCHHHHHHHHHCC NKPKEKKKFWTFNSKKR CCCCHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA