| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357896
GI number: 13357896
Start: 381491
End: 382798
Strand: Direct
Name: Not Available
Synonym: UU336
Alternate gene names: NA
Gene position: 381491-382798 (Clockwise)
Preceding gene: 13357895
Following gene: 13357897
Centisome position: 50.75
GC content: 21.71
Gene sequence:
>1308_bases ATGAATAAAACTAATCAAATTGTGGATTTATTAACCAATAAACAAAATAATTCAATTCAAAGACGCGATAATCTAGTTTT TGTTAAAAATGAACAAGAATTCAAAGATATTTTAGATTCTACTATTAGCTTAAGTAATGTTTATGATCCTTTGTTAGGTA ATGGTTGTGAACAAGAAAAAATAAAAGAATTAACTATTTTAAATAATAGTGTTGATATTAGCAAAATTGAAGAGTATACT AAAACATTAGAAAGTAAAGTAGATGATTTATACAATAATGTTTCTAACCAACTAATTCAAGATTATCAAAAAAATGAGAA TACAAGTGCGAATAATATAATTATGAAAAATGAAGAATTATTAAATTCTCATTTAAAAGAAGTCGAAAAAATTTGTGAAC AGCTAATTGATGAATGAAAAATTGAAATTTTAGGGGAAGTTAATTTTAAATTTCAACAACAATTAATAGAAATCGATCAA AAACAAGAACATAAATTGAAAGTAAAATCATTAATCAATGAAGATAGTTTTTTAACAAAAAGACAAGTTAAAAACAAAAA TAAAATTCTTACTGAATTTGAAAAACATCGTTCACAAATTACACAAAATTATTTAAATAAACGTAGTGATATTCTCAAGA AAGAATATGATGAATTATTAAAAGATGATAAATTATTTGAGTTAAGCTCAGGCGATAATTGAAACAATTTTAAAAAAATA ACTTTATTTATTTCTAACGAGATCGGAATCATTAATGATTTAGAAGATCTATTAAACCATCAAGAATTAATTCGGACTCG AAATTATACAAAACGTGCTATTTTAAATCAACATCATATTAATGGTCACTTTAAAGATGAAAAAAAATATTTGAAATCTT TGTATGATTTACGTGTTAAATTTATGTATGGTTTAGGTTCAGAAATTGTTATTTTAAAATTTTTAATTGAGCATTATAAA AAATTAAATAGTTTACGTTTAAGATTAGAAACATTAAACCACCCTCTTTCAAATTATGCTGTTTATTTTGATATTTTAAA CCGAATTGAAAAACAAACACAATTGTTAGCAAAAATTGAAACTTTAAAATATGATAATTATGATTTTAATGCTGATGTTA TTTTAGATGATTTAGAAAGTAATATCACAAAAATAAATGAGATTAAACATAATTCTAATGTTTTAAATAAAACAAAAGTT ATTAAAACGATTATTGAGCCAAAATATGAATTAGAATTAATTTCAAAAGATGATAAAGTTGATGGTGTTAAGGTTTACGT TAACGATCAAGAAATTCTTTCTAAATAA
Upstream 100 bases:
>100_bases TATTGGATGAATTAAATAATAATAAACCTAAAGAAAAGAAGAAATTTTGGACATGATTTAACTCAAAAAAAAGATAAATA AAAAAAAGGAATTATTAATT
Downstream 100 bases:
>100_bases TTATTTTAAAGGAAACACAAAAAAGGCTTTTAATAATAAAAGCCTTTTTATTTCAAAATGAAACTAAAAATTGATTTTTT ATACGAAAAAGTCTTAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MNKTNQIVDLLTNKQNNSIQRRDNLVFVKNEQEFKDILDSTISLSNVYDPLLGNGCEQEKIKELTILNNSVDISKIEEYT KTLESKVDDLYNNVSNQLIQDYQKNENTSANNIIMKNEELLNSHLKEVEKICEQLIDEWKIEILGEVNFKFQQQLIEIDQ KQEHKLKVKSLINEDSFLTKRQVKNKNKILTEFEKHRSQITQNYLNKRSDILKKEYDELLKDDKLFELSSGDNWNNFKKI TLFISNEIGIINDLEDLLNHQELIRTRNYTKRAILNQHHINGHFKDEKKYLKSLYDLRVKFMYGLGSEIVILKFLIEHYK KLNSLRLRLETLNHPLSNYAVYFDILNRIEKQTQLLAKIETLKYDNYDFNADVILDDLESNITKINEIKHNSNVLNKTKV IKTIIEPKYELELISKDDKVDGVKVYVNDQEILSK
Sequences:
>Translated_435_residues MNKTNQIVDLLTNKQNNSIQRRDNLVFVKNEQEFKDILDSTISLSNVYDPLLGNGCEQEKIKELTILNNSVDISKIEEYT KTLESKVDDLYNNVSNQLIQDYQKNENTSANNIIMKNEELLNSHLKEVEKICEQLIDE*KIEILGEVNFKFQQQLIEIDQ KQEHKLKVKSLINEDSFLTKRQVKNKNKILTEFEKHRSQITQNYLNKRSDILKKEYDELLKDDKLFELSSGDN*NNFKKI TLFISNEIGIINDLEDLLNHQELIRTRNYTKRAILNQHHINGHFKDEKKYLKSLYDLRVKFMYGLGSEIVILKFLIEHYK KLNSLRLRLETLNHPLSNYAVYFDILNRIEKQTQLLAKIETLKYDNYDFNADVILDDLESNITKINEIKHNSNVLNKTKV IKTIIEPKYELELISKDDKVDGVKVYVNDQEILSK >Mature_435_residues MNKTNQIVDLLTNKQNNSIQRRDNLVFVKNEQEFKDILDSTISLSNVYDPLLGNGCEQEKIKELTILNNSVDISKIEEYT KTLESKVDDLYNNVSNQLIQDYQKNENTSANNIIMKNEELLNSHLKEVEKICEQLIDE*KIEILGEVNFKFQQQLIEIDQ KQEHKLKVKSLINEDSFLTKRQVKNKNKILTEFEKHRSQITQNYLNKRSDILKKEYDELLKDDKLFELSSGDN*NNFKKI TLFISNEIGIINDLEDLLNHQELIRTRNYTKRAILNQHHINGHFKDEKKYLKSLYDLRVKFMYGLGSEIVILKFLIEHYK KLNSLRLRLETLNHPLSNYAVYFDILNRIEKQTQLLAKIETLKYDNYDFNADVILDDLESNITKINEIKHNSNVLNKTKV IKTIIEPKYELELISKDDKVDGVKVYVNDQEILSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51026; Mature: 51026
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTNQIVDLLTNKQNNSIQRRDNLVFVKNEQEFKDILDSTISLSNVYDPLLGNGCEQEK CCCHHHHHHHHHCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IKELTILNNSVDISKIEEYTKTLESKVDDLYNNVSNQLIQDYQKNENTSANNIIMKNEEL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHH LNSHLKEVEKICEQLIDEKIEILGEVNFKFQQQLIEIDQKQEHKLKVKSLINEDSFLTKR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH QVKNKNKILTEFEKHRSQITQNYLNKRSDILKKEYDELLKDDKLFELSSGDNNNFKKITL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE FISNEIGIINDLEDLLNHQELIRTRNYTKRAILNQHHINGHFKDEKKYLKSLYDLRVKFM EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH YGLGSEIVILKFLIEHYKKLNSLRLRLETLNHPLSNYAVYFDILNRIEKQTQLLAKIETL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KYDNYDFNADVILDDLESNITKINEIKHNSNVLNKTKVIKTIIEPKYELELISKDDKVDG CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC VKVYVNDQEILSK EEEEECCHHHHCC >Mature Secondary Structure MNKTNQIVDLLTNKQNNSIQRRDNLVFVKNEQEFKDILDSTISLSNVYDPLLGNGCEQEK CCCHHHHHHHHHCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IKELTILNNSVDISKIEEYTKTLESKVDDLYNNVSNQLIQDYQKNENTSANNIIMKNEEL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHH LNSHLKEVEKICEQLIDEKIEILGEVNFKFQQQLIEIDQKQEHKLKVKSLINEDSFLTKR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH QVKNKNKILTEFEKHRSQITQNYLNKRSDILKKEYDELLKDDKLFELSSGDNNNFKKITL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE FISNEIGIINDLEDLLNHQELIRTRNYTKRAILNQHHINGHFKDEKKYLKSLYDLRVKFM EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH YGLGSEIVILKFLIEHYKKLNSLRLRLETLNHPLSNYAVYFDILNRIEKQTQLLAKIETL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KYDNYDFNADVILDDLESNITKINEIKHNSNVLNKTKVIKTIIEPKYELELISKDDKVDG CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC VKVYVNDQEILSK EEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA