Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 13357896

GI number: 13357896

Start: 381491

End: 382798

Strand: Direct

Name: Not Available

Synonym: UU336

Alternate gene names: NA

Gene position: 381491-382798 (Clockwise)

Preceding gene: 13357895

Following gene: 13357897

Centisome position: 50.75

GC content: 21.71

Gene sequence:

>1308_bases
ATGAATAAAACTAATCAAATTGTGGATTTATTAACCAATAAACAAAATAATTCAATTCAAAGACGCGATAATCTAGTTTT
TGTTAAAAATGAACAAGAATTCAAAGATATTTTAGATTCTACTATTAGCTTAAGTAATGTTTATGATCCTTTGTTAGGTA
ATGGTTGTGAACAAGAAAAAATAAAAGAATTAACTATTTTAAATAATAGTGTTGATATTAGCAAAATTGAAGAGTATACT
AAAACATTAGAAAGTAAAGTAGATGATTTATACAATAATGTTTCTAACCAACTAATTCAAGATTATCAAAAAAATGAGAA
TACAAGTGCGAATAATATAATTATGAAAAATGAAGAATTATTAAATTCTCATTTAAAAGAAGTCGAAAAAATTTGTGAAC
AGCTAATTGATGAATGAAAAATTGAAATTTTAGGGGAAGTTAATTTTAAATTTCAACAACAATTAATAGAAATCGATCAA
AAACAAGAACATAAATTGAAAGTAAAATCATTAATCAATGAAGATAGTTTTTTAACAAAAAGACAAGTTAAAAACAAAAA
TAAAATTCTTACTGAATTTGAAAAACATCGTTCACAAATTACACAAAATTATTTAAATAAACGTAGTGATATTCTCAAGA
AAGAATATGATGAATTATTAAAAGATGATAAATTATTTGAGTTAAGCTCAGGCGATAATTGAAACAATTTTAAAAAAATA
ACTTTATTTATTTCTAACGAGATCGGAATCATTAATGATTTAGAAGATCTATTAAACCATCAAGAATTAATTCGGACTCG
AAATTATACAAAACGTGCTATTTTAAATCAACATCATATTAATGGTCACTTTAAAGATGAAAAAAAATATTTGAAATCTT
TGTATGATTTACGTGTTAAATTTATGTATGGTTTAGGTTCAGAAATTGTTATTTTAAAATTTTTAATTGAGCATTATAAA
AAATTAAATAGTTTACGTTTAAGATTAGAAACATTAAACCACCCTCTTTCAAATTATGCTGTTTATTTTGATATTTTAAA
CCGAATTGAAAAACAAACACAATTGTTAGCAAAAATTGAAACTTTAAAATATGATAATTATGATTTTAATGCTGATGTTA
TTTTAGATGATTTAGAAAGTAATATCACAAAAATAAATGAGATTAAACATAATTCTAATGTTTTAAATAAAACAAAAGTT
ATTAAAACGATTATTGAGCCAAAATATGAATTAGAATTAATTTCAAAAGATGATAAAGTTGATGGTGTTAAGGTTTACGT
TAACGATCAAGAAATTCTTTCTAAATAA

Upstream 100 bases:

>100_bases
TATTGGATGAATTAAATAATAATAAACCTAAAGAAAAGAAGAAATTTTGGACATGATTTAACTCAAAAAAAAGATAAATA
AAAAAAAGGAATTATTAATT

Downstream 100 bases:

>100_bases
TTATTTTAAAGGAAACACAAAAAAGGCTTTTAATAATAAAAGCCTTTTTATTTCAAAATGAAACTAAAAATTGATTTTTT
ATACGAAAAAGTCTTAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MNKTNQIVDLLTNKQNNSIQRRDNLVFVKNEQEFKDILDSTISLSNVYDPLLGNGCEQEKIKELTILNNSVDISKIEEYT
KTLESKVDDLYNNVSNQLIQDYQKNENTSANNIIMKNEELLNSHLKEVEKICEQLIDEWKIEILGEVNFKFQQQLIEIDQ
KQEHKLKVKSLINEDSFLTKRQVKNKNKILTEFEKHRSQITQNYLNKRSDILKKEYDELLKDDKLFELSSGDNWNNFKKI
TLFISNEIGIINDLEDLLNHQELIRTRNYTKRAILNQHHINGHFKDEKKYLKSLYDLRVKFMYGLGSEIVILKFLIEHYK
KLNSLRLRLETLNHPLSNYAVYFDILNRIEKQTQLLAKIETLKYDNYDFNADVILDDLESNITKINEIKHNSNVLNKTKV
IKTIIEPKYELELISKDDKVDGVKVYVNDQEILSK

Sequences:

>Translated_435_residues
MNKTNQIVDLLTNKQNNSIQRRDNLVFVKNEQEFKDILDSTISLSNVYDPLLGNGCEQEKIKELTILNNSVDISKIEEYT
KTLESKVDDLYNNVSNQLIQDYQKNENTSANNIIMKNEELLNSHLKEVEKICEQLIDE*KIEILGEVNFKFQQQLIEIDQ
KQEHKLKVKSLINEDSFLTKRQVKNKNKILTEFEKHRSQITQNYLNKRSDILKKEYDELLKDDKLFELSSGDN*NNFKKI
TLFISNEIGIINDLEDLLNHQELIRTRNYTKRAILNQHHINGHFKDEKKYLKSLYDLRVKFMYGLGSEIVILKFLIEHYK
KLNSLRLRLETLNHPLSNYAVYFDILNRIEKQTQLLAKIETLKYDNYDFNADVILDDLESNITKINEIKHNSNVLNKTKV
IKTIIEPKYELELISKDDKVDGVKVYVNDQEILSK
>Mature_435_residues
MNKTNQIVDLLTNKQNNSIQRRDNLVFVKNEQEFKDILDSTISLSNVYDPLLGNGCEQEKIKELTILNNSVDISKIEEYT
KTLESKVDDLYNNVSNQLIQDYQKNENTSANNIIMKNEELLNSHLKEVEKICEQLIDE*KIEILGEVNFKFQQQLIEIDQ
KQEHKLKVKSLINEDSFLTKRQVKNKNKILTEFEKHRSQITQNYLNKRSDILKKEYDELLKDDKLFELSSGDN*NNFKKI
TLFISNEIGIINDLEDLLNHQELIRTRNYTKRAILNQHHINGHFKDEKKYLKSLYDLRVKFMYGLGSEIVILKFLIEHYK
KLNSLRLRLETLNHPLSNYAVYFDILNRIEKQTQLLAKIETLKYDNYDFNADVILDDLESNITKINEIKHNSNVLNKTKV
IKTIIEPKYELELISKDDKVDGVKVYVNDQEILSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51026; Mature: 51026

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTNQIVDLLTNKQNNSIQRRDNLVFVKNEQEFKDILDSTISLSNVYDPLLGNGCEQEK
CCCHHHHHHHHHCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IKELTILNNSVDISKIEEYTKTLESKVDDLYNNVSNQLIQDYQKNENTSANNIIMKNEEL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHH
LNSHLKEVEKICEQLIDEKIEILGEVNFKFQQQLIEIDQKQEHKLKVKSLINEDSFLTKR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
QVKNKNKILTEFEKHRSQITQNYLNKRSDILKKEYDELLKDDKLFELSSGDNNNFKKITL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE
FISNEIGIINDLEDLLNHQELIRTRNYTKRAILNQHHINGHFKDEKKYLKSLYDLRVKFM
EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
YGLGSEIVILKFLIEHYKKLNSLRLRLETLNHPLSNYAVYFDILNRIEKQTQLLAKIETL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYDNYDFNADVILDDLESNITKINEIKHNSNVLNKTKVIKTIIEPKYELELISKDDKVDG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC
VKVYVNDQEILSK
EEEEECCHHHHCC
>Mature Secondary Structure
MNKTNQIVDLLTNKQNNSIQRRDNLVFVKNEQEFKDILDSTISLSNVYDPLLGNGCEQEK
CCCHHHHHHHHHCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IKELTILNNSVDISKIEEYTKTLESKVDDLYNNVSNQLIQDYQKNENTSANNIIMKNEEL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHH
LNSHLKEVEKICEQLIDEKIEILGEVNFKFQQQLIEIDQKQEHKLKVKSLINEDSFLTKR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
QVKNKNKILTEFEKHRSQITQNYLNKRSDILKKEYDELLKDDKLFELSSGDNNNFKKITL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE
FISNEIGIINDLEDLLNHQELIRTRNYTKRAILNQHHINGHFKDEKKYLKSLYDLRVKFM
EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
YGLGSEIVILKFLIEHYKKLNSLRLRLETLNHPLSNYAVYFDILNRIEKQTQLLAKIETL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYDNYDFNADVILDDLESNITKINEIKHNSNVLNKTKVIKTIIEPKYELELISKDDKVDG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC
VKVYVNDQEILSK
EEEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA