| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357889
GI number: 13357889
Start: 374779
End: 376047
Strand: Direct
Name: Not Available
Synonym: UU329
Alternate gene names: NA
Gene position: 374779-376047 (Clockwise)
Preceding gene: 13357888
Following gene: 13357890
Centisome position: 49.86
GC content: 23.64
Gene sequence:
>1269_bases ATGCTAAATGCAGAATTGTCAAGTGCACAAAAAGATTTATATAAATCAATTAAATTATATTTAAACACAATTTTTTTGAA TCAAAAACTAAATTATGCTATTAAAAATGATAATGATTATCGAAATCAATTAAATAAAGTAATGAATATTTTTGAATATT ATGAAGATAATTATGAAATAGCAAATAAAAATTTTCATAGTTATTGACAGGCTTTTAAGTCATATGTTCATTATGAAAAA ATAGTTAATGATTATAACGATTTTGATGAATTAAAAGATATTGTAAATGGTTTAAAAATTTATGTTTTAAATACATTTCA AATAGATTTAGATCAAGAATCACAAAGAATTGCAGATATTGATTTTAAGTATGATGAAAAGACGCAAGCATCAATGGGTT TTTATACTCCAAGAAATCAAGAAAATAATACTAGTACAGAATATGAAAAGGTAAGTGCTGAATCTATTAGTGATGAAGAT AGTATGAATCATACTTATCAACCAACTTCTGATTTTACAACAGCAAATATCGATAATTTAACAAATATGGTATTTAGTGC TCGGGTTATGAATGGTGAAATTTATTTATATGAAACGAAACCAAAAGTTATTCCTTTCTTAAAATATGTTTTTTTTGCTG TTAGTTTAGCTTTGGTTTTTTTTACAACATTAACGTATGCTTTTCTAATGGATTTTGGCACACATATGTCAAGTGTTATT AATGTTAATGGTATTACTCATATTGTTCGTTTAGTTTCGCCAACATTTCCAACCCAGTTAGTGATATCAATATTCATTAT GATTTATGCTGGAATAAATGCTTTTAAAAGAAAAATTAGTGAAAATGAGAAGTTTCATTTTAAAAATTTTATTTGAATTA TTTTGTTTGGAGCATTATTAGTAGTTGCATTAGCAAATATTTTTACTGGAAATTTAAGATTTTCAAGTAGTTCATTTGAT GAAATGTTTCGTCAAGCACAAATTAATGATGTATTAGCTAACTTAGCAAGAAATAATAGTTTTAGTTTTGATTATTCGTA TTTACAAAGTATTTTTTATGGCTATAGTATCGCCCAAATTTTAGTATTTGTAGTTATTATTTTAGGAACAATTTTAATTA TTAGTACTTTTATTTTAAATCCTAAACGTGATATTCAAAGAATAAAATTATTATTACAAGAAATTCATGATGATATTTTA ACAGGTAAAATTGATCCTAATACATATTTAAGAACAAAAAATCCCTTTAGAGACTTGTTTGGTTTTTAG
Upstream 100 bases:
>100_bases ATTTATATTTGTTAAAATTAATAGACCAAATTAAATAAAATACTTTTGTTTTAATGTCAGTTCAGTTTATTTTATTTTAG ATTAATGAGGTGGTTATTAG
Downstream 100 bases:
>100_bases ATGAATTCAAGATTTAAATTTAACTATGATATAAATAATAAATTAGCATTATCCTTTACAAAGGATTTAATTGCTAATAA AAAGCAAAAAAATAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLNAELSSAQKDLYKSIKLYLNTIFLNQKLNYAIKNDNDYRNQLNKVMNIFEYYEDNYEIANKNFHSYWQAFKSYVHYEK IVNDYNDFDELKDIVNGLKIYVLNTFQIDLDQESQRIADIDFKYDEKTQASMGFYTPRNQENNTSTEYEKVSAESISDED SMNHTYQPTSDFTTANIDNLTNMVFSARVMNGEIYLYETKPKVIPFLKYVFFAVSLALVFFTTLTYAFLMDFGTHMSSVI NVNGITHIVRLVSPTFPTQLVISIFIMIYAGINAFKRKISENEKFHFKNFIWIILFGALLVVALANIFTGNLRFSSSSFD EMFRQAQINDVLANLARNNSFSFDYSYLQSIFYGYSIAQILVFVVIILGTILIISTFILNPKRDIQRIKLLLQEIHDDIL TGKIDPNTYLRTKNPFRDLFGF
Sequences:
>Translated_422_residues MLNAELSSAQKDLYKSIKLYLNTIFLNQKLNYAIKNDNDYRNQLNKVMNIFEYYEDNYEIANKNFHSY*QAFKSYVHYEK IVNDYNDFDELKDIVNGLKIYVLNTFQIDLDQESQRIADIDFKYDEKTQASMGFYTPRNQENNTSTEYEKVSAESISDED SMNHTYQPTSDFTTANIDNLTNMVFSARVMNGEIYLYETKPKVIPFLKYVFFAVSLALVFFTTLTYAFLMDFGTHMSSVI NVNGITHIVRLVSPTFPTQLVISIFIMIYAGINAFKRKISENEKFHFKNFI*IILFGALLVVALANIFTGNLRFSSSSFD EMFRQAQINDVLANLARNNSFSFDYSYLQSIFYGYSIAQILVFVVIILGTILIISTFILNPKRDIQRIKLLLQEIHDDIL TGKIDPNTYLRTKNPFRDLFGF >Mature_422_residues MLNAELSSAQKDLYKSIKLYLNTIFLNQKLNYAIKNDNDYRNQLNKVMNIFEYYEDNYEIANKNFHSY*QAFKSYVHYEK IVNDYNDFDELKDIVNGLKIYVLNTFQIDLDQESQRIADIDFKYDEKTQASMGFYTPRNQENNTSTEYEKVSAESISDED SMNHTYQPTSDFTTANIDNLTNMVFSARVMNGEIYLYETKPKVIPFLKYVFFAVSLALVFFTTLTYAFLMDFGTHMSSVI NVNGITHIVRLVSPTFPTQLVISIFIMIYAGINAFKRKISENEKFHFKNFI*IILFGALLVVALANIFTGNLRFSSSSFD EMFRQAQINDVLANLARNNSFSFDYSYLQSIFYGYSIAQILVFVVIILGTILIISTFILNPKRDIQRIKLLLQEIHDDIL TGKIDPNTYLRTKNPFRDLFGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48811; Mature: 48811
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNAELSSAQKDLYKSIKLYLNTIFLNQKLNYAIKNDNDYRNQLNKVMNIFEYYEDNYEI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCC ANKNFHSYQAFKSYVHYEKIVNDYNDFDELKDIVNGLKIYVLNTFQIDLDQESQRIADID CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHCCC FKYDEKTQASMGFYTPRNQENNTSTEYEKVSAESISDEDSMNHTYQPTSDFTTANIDNLT CCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH NMVFSARVMNGEIYLYETKPKVIPFLKYVFFAVSLALVFFTTLTYAFLMDFGTHMSSVIN HHHHHHEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNGITHIVRLVSPTFPTQLVISIFIMIYAGINAFKRKISENEKFHFKNFIIILFGALLVV CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ALANIFTGNLRFSSSSFDEMFRQAQINDVLANLARNNSFSFDYSYLQSIFYGYSIAQILV HHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH FVVIILGTILIISTFILNPKRDIQRIKLLLQEIHDDILTGKIDPNTYLRTKNPFRDLFGF HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCC >Mature Secondary Structure MLNAELSSAQKDLYKSIKLYLNTIFLNQKLNYAIKNDNDYRNQLNKVMNIFEYYEDNYEI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCC ANKNFHSYQAFKSYVHYEKIVNDYNDFDELKDIVNGLKIYVLNTFQIDLDQESQRIADID CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHCCC FKYDEKTQASMGFYTPRNQENNTSTEYEKVSAESISDEDSMNHTYQPTSDFTTANIDNLT CCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH NMVFSARVMNGEIYLYETKPKVIPFLKYVFFAVSLALVFFTTLTYAFLMDFGTHMSSVIN HHHHHHEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNGITHIVRLVSPTFPTQLVISIFIMIYAGINAFKRKISENEKFHFKNFIIILFGALLVV CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ALANIFTGNLRFSSSSFDEMFRQAQINDVLANLARNNSFSFDYSYLQSIFYGYSIAQILV HHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH FVVIILGTILIISTFILNPKRDIQRIKLLLQEIHDDILTGKIDPNTYLRTKNPFRDLFGF HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA