Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357865

GI number: 13357865

Start: 350065

End: 350832

Strand: Direct

Name: Not Available

Synonym: UU305

Alternate gene names: 13357865

Gene position: 350065-350832 (Clockwise)

Preceding gene: 13357864

Following gene: 13357866

Centisome position: 46.57

GC content: 24.22

Gene sequence:

>768_bases
ATGCAAAAAAAATACATTAAAAATACTTTAGGCTTTGATACAAATTTATTTATATATCAAGATAAAAAAATGTTCAATTA
TTCAATTGATACTATTCTGTTAGCAAATTTTATAAGCTTATCTTCTAAGACGAAAAAAATTTTAGAAATAGGAACAAATA
ATGCTGCATTGAGTATTTTTTTAGCTTTGCGCAAAGAGGATATAAAAATTGATGCGATTGAAATTCAAATAGAAGCAATT
AACCTTGCATTATTAAATGTTAGTCAAAATCATTTTGAAAAACAAATTAATATTATACATGCTGATTTTAATCAATATTG
GAAAGATTTTGATAAAAGCGAAAATAATAAATATGATGCAATAATCTGTAACCCCCCTTTTTATAAACAAGATAAAATTA
TTCCATCAACTAAAAATCCATTAAAAACTTTAGCTTTATATGAAATCACGCTTAATTTTGAACAAATTATGCAAGGGTGT
GCTAAGATAATTAAACAAAAAGGAAATTTAGCAATGGTTATTCCTACAACGCGTTTAGTTGATCTTTTAGAAATTATGCG
TAAATATCAATTTGAACCAAAACGAATTAAAATGATTTATCCACGAATCTATGAACAATCAAATTTAGTTTTAATAGAAG
CGCGTTACAAAAGTGGTTGAGGTACACACTTTGAACCAAATCTTTATTTACATTATGAAGATAAACAAAATCATCAATAT
ACTGAAGAAGTTTTAAATTGATATAAACCAATTAAGTTTAAAAAATAA

Upstream 100 bases:

>100_bases
AGCTATTAGTGTGGGTTCGATTCCCATCACCCGCTCCATTAATAATATTTAACTAAACTCCACCCTATTAGTGGAGTTTT
TCTTTAATTAAGAACTACTT

Downstream 100 bases:

>100_bases
TTGTAAGTAAATTAATTAAATTTCTATTTTAAGGATGATGAAAATGAATAATATGGATAAATATAATTTAATTATAGGTA
GTCATGTAAGTTTAAAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MQKKYIKNTLGFDTNLFIYQDKKMFNYSIDTILLANFISLSSKTKKILEIGTNNAALSIFLALRKEDIKIDAIEIQIEAI
NLALLNVSQNHFEKQINIIHADFNQYWKDFDKSENNKYDAIICNPPFYKQDKIIPSTKNPLKTLALYEITLNFEQIMQGC
AKIIKQKGNLAMVIPTTRLVDLLEIMRKYQFEPKRIKMIYPRIYEQSNLVLIEARYKSGWGTHFEPNLYLHYEDKQNHQY
TEEVLNWYKPIKFKK

Sequences:

>Translated_255_residues
MQKKYIKNTLGFDTNLFIYQDKKMFNYSIDTILLANFISLSSKTKKILEIGTNNAALSIFLALRKEDIKIDAIEIQIEAI
NLALLNVSQNHFEKQINIIHADFNQYWKDFDKSENNKYDAIICNPPFYKQDKIIPSTKNPLKTLALYEITLNFEQIMQGC
AKIIKQKGNLAMVIPTTRLVDLLEIMRKYQFEPKRIKMIYPRIYEQSNLVLIEARYKSG*GTHFEPNLYLHYEDKQNHQY
TEEVLN*YKPIKFKK
>Mature_255_residues
MQKKYIKNTLGFDTNLFIYQDKKMFNYSIDTILLANFISLSSKTKKILEIGTNNAALSIFLALRKEDIKIDAIEIQIEAI
NLALLNVSQNHFEKQINIIHADFNQYWKDFDKSENNKYDAIICNPPFYKQDKIIPSTKNPLKTLALYEITLNFEQIMQGC
AKIIKQKGNLAMVIPTTRLVDLLEIMRKYQFEPKRIKMIYPRIYEQSNLVLIEARYKSG*GTHFEPNLYLHYEDKQNHQY
TEEVLN*YKPIKFKK

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082131, Length=161, Percent_Identity=29.1925465838509, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 29798; Mature: 29798

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKYIKNTLGFDTNLFIYQDKKMFNYSIDTILLANFISLSSKTKKILEIGTNNAALSIF
CCCHHHHHHCCCCCEEEEEECCEEECCCHHHHHHHHHHHHCHHHHEEEEECCCCCEEEEE
LALRKEDIKIDAIEIQIEAINLALLNVSQNHFEKQINIIHADFNQYWKDFDKSENNKYDA
EEEECCCCEEEEEEEEEEEEEEEEEECCHHHHHHEEEEEEECHHHHHHHHCCCCCCCEEE
IICNPPFYKQDKIIPSTKNPLKTLALYEITLNFEQIMQGCAKIIKQKGNLAMVIPTTRLV
EEECCCCCCCCCCCCCCCCCHHEEEEEEEEECHHHHHHHHHHHHHCCCCEEEEECHHHHH
DLLEIMRKYQFEPKRIKMIYPRIYEQSNLVLIEARYKSGGTHFEPNLYLHYEDKQNHQYT
HHHHHHHHHCCCCCCEEEEEHHEECCCCEEEEEEEECCCCCEECCEEEEEEECCCCCHHH
EEVLNYKPIKFKK
HHHHCCCCCEECC
>Mature Secondary Structure
MQKKYIKNTLGFDTNLFIYQDKKMFNYSIDTILLANFISLSSKTKKILEIGTNNAALSIF
CCCHHHHHHCCCCCEEEEEECCEEECCCHHHHHHHHHHHHCHHHHEEEEECCCCCEEEEE
LALRKEDIKIDAIEIQIEAINLALLNVSQNHFEKQINIIHADFNQYWKDFDKSENNKYDA
EEEECCCCEEEEEEEEEEEEEEEEEECCHHHHHHEEEEEEECHHHHHHHHCCCCCCCEEE
IICNPPFYKQDKIIPSTKNPLKTLALYEITLNFEQIMQGCAKIIKQKGNLAMVIPTTRLV
EEECCCCCCCCCCCCCCCCCHHEEEEEEEEECHHHHHHHHHHHHHCCCCEEEEECHHHHH
DLLEIMRKYQFEPKRIKMIYPRIYEQSNLVLIEARYKSGGTHFEPNLYLHYEDKQNHQYT
HHHHHHHHHCCCCCCEEEEEHHEECCCCEEEEEEEECCCCCEECCEEEEEEECCCCCHHH
EEVLNYKPIKFKK
HHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]