| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is celM
Identifier: 13357840
GI number: 13357840
Start: 315422
End: 316513
Strand: Direct
Name: celM
Synonym: UU280
Alternate gene names: 13357840
Gene position: 315422-316513 (Clockwise)
Preceding gene: 13357839
Following gene: 13357841
Centisome position: 41.96
GC content: 31.59
Gene sequence:
>1092_bases ATGAGTAAATTTAACGAAAAAGAAATTAGAAATAAAGCAATTGAATATATGGAAATATATGGTATGTCACGTCATGAAGA ACGTGTTGCTTCCAAACTAAAAGCATCATTAAAAGATGCGGGAGTTGATTATGAACGTGATAATTTAGGTTCAATTATTT TTAAAAAAACAAATTCAAATAAAGGACCTAAAATCTTAATTGCTACACACATGGATGAAGTTGGTTTTGTAGTTCAACAA ATTCTTGATAATGGTCAATTACTATTATCAATGGTAGGTGGTGTATGGCCTAATATTGCTATTGGATCAGTAGCAAAAGT GTATGTTGATGAACAACGTCAATATACTGGTGTATTTGGCCATACTTCAATTCATATCTTAGAACCTGAAGCACGCAGTA AAGCAGTTCCAGTTAAAGAATTATTTGTTGATTGCGGTTTTAATTCAAAACAACAAGCTATTGATTTAGGAATTGAAATA GGTACGGAAGTTTATATGGAAGGACCAACTTTAAATTTTTATGATGAAAATTATATTGTTGGTAAAGCTGTTGATAATCG TGTAAGTGTTGCGGTTTTAGATTTATTAATACATAGTTTAAAGGACAAAGTAATTCCCAACCAAACTTATTTTGCTGCAA CAGTGCAAGAAGAAGTTGGATTACGTGGCGCAAAAACAGTTGTTTCAAAAGTAAAACCTGATATTGGGATTGTTATTGAT ACAACAACATCACACGATACATACAAGTGTCCAGAGGGTGATACAAAATTAAATGATGGTGTATGTATTAGAATTAAAGA TGGTGGAACTTTAGTTAATCCTAAATTAGTAAAATATTTTGAAGAATTAGCTATTAAACACAACATTCCTTTATATAAAT ATGTTGCACGAGGAGGCGGGACTGATGCTGAAGAATTGCAATATGGGCCTAATGGTGGAGTATTAACAATTGGTTTGTCT ATCCCACAACGTTATTTACATGCTCCAATTGGCGTAGCAACGGTTAAAGATATAAAAGCAGCCTTTGACTTAGTACGTGA GTTTTTAGAAGTATTTGATGAAAACGAATTTGAAAAAGTAAAATTTAAATAA
Upstream 100 bases:
>100_bases TGGTGGGGGCGCTAGCTTATCATATATTGAAGAAGGAGTTCTTGATGGTCTTGAAACCATTGATAATGTTCCTTTAAATG TTTTAAAGAAGGAGTAATTT
Downstream 100 bases:
>100_bases TTTTTATATCAAATAAAAACCTTTTAATATAAAATTAAATATCGTAATAAATTTATTTTTAGGAGAATAAAATATGACTG CACATAATCAAGCTAAATTA
Product: endo-1,4-beta-glucanase
Products: D-glucose; GDP
Alternate protein names: TET; TET aminopeptidase; Leucyl aminopeptidase; PhTET2 [H]
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSKFNEKEIRNKAIEYMEIYGMSRHEERVASKLKASLKDAGVDYERDNLGSIIFKKTNSNKGPKILIATHMDEVGFVVQQ ILDNGQLLLSMVGGVWPNIAIGSVAKVYVDEQRQYTGVFGHTSIHILEPEARSKAVPVKELFVDCGFNSKQQAIDLGIEI GTEVYMEGPTLNFYDENYIVGKAVDNRVSVAVLDLLIHSLKDKVIPNQTYFAATVQEEVGLRGAKTVVSKVKPDIGIVID TTTSHDTYKCPEGDTKLNDGVCIRIKDGGTLVNPKLVKYFEELAIKHNIPLYKYVARGGGTDAEELQYGPNGGVLTIGLS IPQRYLHAPIGVATVKDIKAAFDLVREFLEVFDENEFEKVKFK
Sequences:
>Translated_363_residues MSKFNEKEIRNKAIEYMEIYGMSRHEERVASKLKASLKDAGVDYERDNLGSIIFKKTNSNKGPKILIATHMDEVGFVVQQ ILDNGQLLLSMVGGVWPNIAIGSVAKVYVDEQRQYTGVFGHTSIHILEPEARSKAVPVKELFVDCGFNSKQQAIDLGIEI GTEVYMEGPTLNFYDENYIVGKAVDNRVSVAVLDLLIHSLKDKVIPNQTYFAATVQEEVGLRGAKTVVSKVKPDIGIVID TTTSHDTYKCPEGDTKLNDGVCIRIKDGGTLVNPKLVKYFEELAIKHNIPLYKYVARGGGTDAEELQYGPNGGVLTIGLS IPQRYLHAPIGVATVKDIKAAFDLVREFLEVFDENEFEKVKFK >Mature_362_residues SKFNEKEIRNKAIEYMEIYGMSRHEERVASKLKASLKDAGVDYERDNLGSIIFKKTNSNKGPKILIATHMDEVGFVVQQI LDNGQLLLSMVGGVWPNIAIGSVAKVYVDEQRQYTGVFGHTSIHILEPEARSKAVPVKELFVDCGFNSKQQAIDLGIEIG TEVYMEGPTLNFYDENYIVGKAVDNRVSVAVLDLLIHSLKDKVIPNQTYFAATVQEEVGLRGAKTVVSKVKPDIGIVIDT TTSHDTYKCPEGDTKLNDGVCIRIKDGGTLVNPKLVKYFEELAIKHNIPLYKYVARGGGTDAEELQYGPNGGVLTIGLSI PQRYLHAPIGVATVKDIKAAFDLVREFLEVFDENEFEKVKFK
Specific function: Functions as an aminopeptidase, with a clear preference for leucine as the N-terminal amino acid. However, can also cleave moderately long polypeptide substrates of various compositions in a fairly unspecific manner. Has neither carboxypeptidase nor endop
COG id: COG1363
COG function: function code G; Cellulase M and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M42 family [H]
Homologues:
Organism=Escherichia coli, GI1790332, Length=342, Percent_Identity=32.1637426900585, Blast_Score=166, Evalue=3e-42, Organism=Escherichia coli, GI87082417, Length=352, Percent_Identity=30.1136363636364, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1788727, Length=305, Percent_Identity=26.8852459016393, Blast_Score=119, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008007 [H]
Pfam domain/function: PF05343 Peptidase_M42 [H]
EC number: 3.2.1.4
Molecular weight: Translated: 40305; Mature: 40174
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFNEKEIRNKAIEYMEIYGMSRHEERVASKLKASLKDAGVDYERDNLGSIIFKKTNSN CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC KGPKILIATHMDEVGFVVQQILDNGQLLLSMVGGVWPNIAIGSVAKVYVDEQRQYTGVFG CCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHCCCCEEEEECCCCEEEEEC HTSIHILEPEARSKAVPVKELFVDCGFNSKQQAIDLGIEIGTEVYMEGPTLNFYDENYIV CCEEEEECCCCCCCCCCHHHHHEECCCCCCHHHHEECEEECCEEEEECCEEEEECCCEEE GKAVDNRVSVAVLDLLIHSLKDKVIPNQTYFAATVQEEVGLRGAKTVVSKVKPDIGIVID EECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHHHCCCCCEEEEE TTTSHDTYKCPEGDTKLNDGVCIRIKDGGTLVNPKLVKYFEELAIKHNIPLYKYVARGGG CCCCCCCEECCCCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHCCCCHHHHHHCCCC TDAEELQYGPNGGVLTIGLSIPQRYLHAPIGVATVKDIKAAFDLVREFLEVFDENEFEKV CCHHHCEECCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE KFK CCC >Mature Secondary Structure SKFNEKEIRNKAIEYMEIYGMSRHEERVASKLKASLKDAGVDYERDNLGSIIFKKTNSN CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC KGPKILIATHMDEVGFVVQQILDNGQLLLSMVGGVWPNIAIGSVAKVYVDEQRQYTGVFG CCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHCCCCEEEEECCCCEEEEEC HTSIHILEPEARSKAVPVKELFVDCGFNSKQQAIDLGIEIGTEVYMEGPTLNFYDENYIV CCEEEEECCCCCCCCCCHHHHHEECCCCCCHHHHEECEEECCEEEEECCEEEEECCCEEE GKAVDNRVSVAVLDLLIHSLKDKVIPNQTYFAATVQEEVGLRGAKTVVSKVKPDIGIVID EECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHHHCCCCCEEEEE TTTSHDTYKCPEGDTKLNDGVCIRIKDGGTLVNPKLVKYFEELAIKHNIPLYKYVARGGG CCCCCCCEECCCCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHCCCCHHHHHHCCCC TDAEELQYGPNGGVLTIGLSIPQRYLHAPIGVATVKDIKAAFDLVREFLEVFDENEFEKV CCHHHCEECCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE KFK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GDPglucose; H2O
Specific reaction: GDP-glucose + H2O = D-glucose + GDP
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]