| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is pgk
Identifier: 13357839
GI number: 13357839
Start: 314150
End: 315418
Strand: Direct
Name: pgk
Synonym: UU279
Alternate gene names: 13357839
Gene position: 314150-315418 (Clockwise)
Preceding gene: 13357838
Following gene: 13357840
Centisome position: 41.79
GC content: 28.61
Gene sequence:
>1269_bases ATGAATAGTTTAAATAAAAAAAGTATAAAAGATCTTGATGTAAATGGTAAAACAATAGTTTTACATTTAGATTTAAATGT TGTTGTTGATTATGAAAATAAACGCATATTAAATGATCGTAAATTACGAGCATCACTACCAACTATTAATTATTTAATTA ATCATAACGCTAAAATTGTTATTTTAAGTCATTTAGGTCGAATTAAAACCTTAGCAGATAAACAAAGTGGTAAATATAGT TTAGAAATTATTGTTGATGAACTCCGTAATCGTGTATCCAAGAATGTTAATCGTGTTGTATTTTCACCTTTAAATTATGG AGAAACGGTCGTACAAATGGTTAATGATTTAGAAGAAAGAGACATTTTAATTTTAGAAAATACGCGTTATTGTGATATTA GTGATGAAGGTGAATATGTTGGGCTTGAATGAGATGGTTCAGAGATTTTAGGACAGTTTTGGGGAATGCTAGGGGATATT TTTATTGATGATGCATATGGAGTTGCTCATCGACAATTATCATCAAATTATCAAACAGCTAAATTTGCTAAAAAAAGTGC ATTAGGTTTTTTAATTGTTAATGAAATTAACCATCTAGATATTGCTTTAGAAGTTCCTAAAAGTCCGTATTTAGCTTTAA TAGGTGGTAACCGTGTTGCTGATAAAATTGCAGCAATTGAAGTATTATGTGAACGGGCTGATCAAGTTATTATTGGGGGA GGATTAGTCTATACATTTTTATATGCTCAAGGGTATAACGTTGGTTTAAATTTAGTAGAACGCAATATGATTGATGATTG CAATAATATATTAGAAAAATACGGTAAAAAAATTTTAATTTGTTTTGATTTTTTATGTAACAATGATTTTAGTGATACAA GACCGATTTATCGTAAAATAGATGAAGGTCTTGAAGGGTTATATGGTTTAGATATTGGTAAAAGAAGTTTAAAATTTATT AAACATGAAATTTATCGTTCTAAAACTATTTTACTAAATGGTCCCTTTGGTGTTATTGAAAATATTAAGAATTATGCACA AGGTACTACTGAAATATGTAAATCAATGGCAAAACAAACAACACGTGGCGCTTATACAATTATATGTGATATCGATACTT CGAGTCATGCTGAATACCTAGGATTAGATAAATATATTAATTTTATATCTACTGGTGGGGGCGCTAGCTTATCATATATT GAAGAAGGAGTTCTTGATGGTCTTGAAACCATTGATAATGTTCCTTTAAATGTTTTAAAGAAGGAGTAA
Upstream 100 bases:
>100_bases TATCAGCACAACGTTATACATTAGTATGATGTGTTAAACAGGTTTTAGCTAATGGTTTGGCAATTATGAAAATAACTCCA TATGATCAGATGTATTAAAA
Downstream 100 bases:
>100_bases TTTATGAGTAAATTTAACGAAAAAGAAATTAGAAATAAAGCAATTGAATATATGGAAATATATGGTATGTCACGTCATGA AGAACGTGTTGCTTCCAAAC
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MNSLNKKSIKDLDVNGKTIVLHLDLNVVVDYENKRILNDRKLRASLPTINYLINHNAKIVILSHLGRIKTLADKQSGKYS LEIIVDELRNRVSKNVNRVVFSPLNYGETVVQMVNDLEERDILILENTRYCDISDEGEYVGLEWDGSEILGQFWGMLGDI FIDDAYGVAHRQLSSNYQTAKFAKKSALGFLIVNEINHLDIALEVPKSPYLALIGGNRVADKIAAIEVLCERADQVIIGG GLVYTFLYAQGYNVGLNLVERNMIDDCNNILEKYGKKILICFDFLCNNDFSDTRPIYRKIDEGLEGLYGLDIGKRSLKFI KHEIYRSKTILLNGPFGVIENIKNYAQGTTEICKSMAKQTTRGAYTIICDIDTSSHAEYLGLDKYINFISTGGGASLSYI EEGVLDGLETIDNVPLNVLKKE
Sequences:
>Translated_422_residues MNSLNKKSIKDLDVNGKTIVLHLDLNVVVDYENKRILNDRKLRASLPTINYLINHNAKIVILSHLGRIKTLADKQSGKYS LEIIVDELRNRVSKNVNRVVFSPLNYGETVVQMVNDLEERDILILENTRYCDISDEGEYVGLE*DGSEILGQFWGMLGDI FIDDAYGVAHRQLSSNYQTAKFAKKSALGFLIVNEINHLDIALEVPKSPYLALIGGNRVADKIAAIEVLCERADQVIIGG GLVYTFLYAQGYNVGLNLVERNMIDDCNNILEKYGKKILICFDFLCNNDFSDTRPIYRKIDEGLEGLYGLDIGKRSLKFI KHEIYRSKTILLNGPFGVIENIKNYAQGTTEICKSMAKQTTRGAYTIICDIDTSSHAEYLGLDKYINFISTGGGASLSYI EEGVLDGLETIDNVPLNVLKKE >Mature_422_residues MNSLNKKSIKDLDVNGKTIVLHLDLNVVVDYENKRILNDRKLRASLPTINYLINHNAKIVILSHLGRIKTLADKQSGKYS LEIIVDELRNRVSKNVNRVVFSPLNYGETVVQMVNDLEERDILILENTRYCDISDEGEYVGLE*DGSEILGQFWGMLGDI FIDDAYGVAHRQLSSNYQTAKFAKKSALGFLIVNEINHLDIALEVPKSPYLALIGGNRVADKIAAIEVLCERADQVIIGG GLVYTFLYAQGYNVGLNLVERNMIDDCNNILEKYGKKILICFDFLCNNDFSDTRPIYRKIDEGLEGLYGLDIGKRSLKFI KHEIYRSKTILLNGPFGVIENIKNYAQGTTEICKSMAKQTTRGAYTIICDIDTSSHAEYLGLDKYINFISTGGGASLSYI EEGVLDGLETIDNVPLNVLKKE
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=428, Percent_Identity=32.7102803738318, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI31543397, Length=427, Percent_Identity=31.3817330210773, Blast_Score=196, Evalue=5e-50, Organism=Escherichia coli, GI1789294, Length=409, Percent_Identity=32.7628361858191, Blast_Score=206, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17508823, Length=425, Percent_Identity=34.8235294117647, Blast_Score=220, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6319857, Length=423, Percent_Identity=32.8605200945626, Blast_Score=191, Evalue=2e-49, Organism=Drosophila melanogaster, GI17136394, Length=426, Percent_Identity=30.2816901408451, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI24581203, Length=425, Percent_Identity=30.8235294117647, Blast_Score=179, Evalue=2e-45,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 47180; Mature: 47180
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLNKKSIKDLDVNGKTIVLHLDLNVVVDYENKRILNDRKLRASLPTINYLINHNAKIV CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCEECCCCHHHHCCCEEEEEECCCCEEE ILSHLGRIKTLADKQSGKYSLEIIVDELRNRVSKNVNRVVFSPLNYGETVVQMVNDLEER EEECCCHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHC DILILENTRYCDISDEGEYVGLEDGSEILGQFWGMLGDIFIDDAYGVAHRQLSSNYQTAK CEEEEECCEEECCCCCCCEECCCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCHHHH FAKKSALGFLIVNEINHLDIALEVPKSPYLALIGGNRVADKIAAIEVLCERADQVIIGGG HHHHHCCEEEEEECCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEECCH LVYTFLYAQGYNVGLNLVERNMIDDCNNILEKYGKKILICFDFLCNNDFSDTRPIYRKID HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHCCCCCCCHHHHHHHH EGLEGLYGLDIGKRSLKFIKHEIYRSKTILLNGPFGVIENIKNYAQGTTEICKSMAKQTT HHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHCC RGAYTIICDIDTSSHAEYLGLDKYINFISTGGGASLSYIEEGVLDGLETIDNVPLNVLKK CCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCC E C >Mature Secondary Structure MNSLNKKSIKDLDVNGKTIVLHLDLNVVVDYENKRILNDRKLRASLPTINYLINHNAKIV CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCEECCCCHHHHCCCEEEEEECCCCEEE ILSHLGRIKTLADKQSGKYSLEIIVDELRNRVSKNVNRVVFSPLNYGETVVQMVNDLEER EEECCCHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHC DILILENTRYCDISDEGEYVGLEDGSEILGQFWGMLGDIFIDDAYGVAHRQLSSNYQTAK CEEEEECCEEECCCCCCCEECCCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCHHHH FAKKSALGFLIVNEINHLDIALEVPKSPYLALIGGNRVADKIAAIEVLCERADQVIIGGG HHHHHCCEEEEEECCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEECCH LVYTFLYAQGYNVGLNLVERNMIDDCNNILEKYGKKILICFDFLCNNDFSDTRPIYRKID HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHCCCCCCCHHHHHHHH EGLEGLYGLDIGKRSLKFIKHEIYRSKTILLNGPFGVIENIKNYAQGTTEICKSMAKQTT HHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHCC RGAYTIICDIDTSSHAEYLGLDKYINFISTGGGASLSYIEEGVLDGLETIDNVPLNVLKK CCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]