| Definition | Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence. |
|---|---|
| Accession | NC_001988 |
| Length | 192,000 |
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Identifier: 15004733
GI number: 15004733
Start: 30112
End: 31311
Strand: Direct
Name: Not Available
Synonym: CA_P0029
Alternate gene names: 15004733
Gene position: 30112-31311 (Clockwise)
Preceding gene: 15004731
Following gene: 15004734
Centisome position: 15.68
GC content: 34.5
Gene sequence:
>1200_bases ATGAAAATGTGGAAAAAAAATTTGATAGTTTGTTGGTTTGGAATGTTTATAACCAGTATAGGAATGAGTCAAATTGCCCC AGTACTACCTCTTTACATAAGACATCTTGGGGTTAATAGCTCATCCTTAGTTGAAGAGTTTTCAGGTATTGCTTTTGGGA TTACCTTTATAGTATCAGCTATTTTTTCTCCTATTTGGGGGCAAGCTGCTGATAAATTTGGTAGGAAGCCTATGCTTCTT AGAGCAAGTTTTGGTATGGGAATAATTATATTTAGTATGGGTTTTGTATCAAATGTATATGTGCTTATAGTATTGAGATT GCTTCAGGGTGTTATAACTGGTTACAGCACAGCTTGCACTACGCTAATTGCAACACAAACGGATAAAGAACATGCTGGAT GGGCACTCGGCACACTTTCAACTGCTGGTATTGCAGGATCACTTCTTGGACCAACTATTGGTGGTTTTGTAGAAGAAGCC TTTGGTACACAAAATGTATTTTTCATAACAGGTGCACTGCTTATAATTGTATTTATTGCTACAATGCTGTTTGTGAAGGA AGATTTTGTACGTGAAAATAAAAAGGTTGATAGTATGAAGAAAGTATGGAATAGCGTTCCTGAAAAAAGTCTTACTATAA CTATTCTTGTAACGTTTTTTATATTAACCTTAGCATTATACTCAATAGAACCAATTATGACAGAGTATGTTTCTAAGCTA TCAAGGAATACTAGTCATGTTGCTTTTATAGCAGGGTTGGTTTTTTCAGCTTCGGGACTTGCTAACATAGTTGCAGCACC AAGGCTTGGAAAAATTTCTGATAAAATTGGACCTCATAAGATTATGCTTGGTGCCCTCATAGTTGCAGGTATAGTATTTA TACCGCAAGCTTTTGTTAAAAATCCATGGCAGTTAATGTTTTTTAGATTTTTATTAGGACTTGCATCAGGAGGATTAACT CCATCAGTTAATATATTAGTAAAGAAAATCACACCTACGGCTATTACAGGAAGAATTTTTGGACTTAGTATGTCAGCAGG ATACCTTGGTGTATTTGGAGGTTCAGTTTTAGGAGGGCAGGTTTCAGCTTATTTAGGAATTAGATATGTATTTTTTATTA CCAGTTCACTGCTGCTTATAAATGCAGTGTGGGTTTATTTTAAAGTGTATAAAAAACTTAATTTAAAAGAAATAGTTTAA
Upstream 100 bases:
>100_bases ATCTTAACATGTTAAGAGTTTTTTTACAAACTATATTTTATAGTTTACAAACTACATTGTATAGTTTATACTATAGCTTA TAGAAAGAAGGACTGAATTT
Downstream 100 bases:
>100_bases TATAAAGGAGATAACAATATGGAAAATTTAGAAATAGAAAAAACGGCCCTTGTGGTTATAGATTTGCAAAAAGGCATTGT AGCTGGAGAGCATGCGCCTT
Product: permease MDR-related
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKMWKKNLIVCWFGMFITSIGMSQIAPVLPLYIRHLGVNSSSLVEEFSGIAFGITFIVSAIFSPIWGQAADKFGRKPMLL RASFGMGIIIFSMGFVSNVYVLIVLRLLQGVITGYSTACTTLIATQTDKEHAGWALGTLSTAGIAGSLLGPTIGGFVEEA FGTQNVFFITGALLIIVFIATMLFVKEDFVRENKKVDSMKKVWNSVPEKSLTITILVTFFILTLALYSIEPIMTEYVSKL SRNTSHVAFIAGLVFSASGLANIVAAPRLGKISDKIGPHKIMLGALIVAGIVFIPQAFVKNPWQLMFFRFLLGLASGGLT PSVNILVKKITPTAITGRIFGLSMSAGYLGVFGGSVLGGQVSAYLGIRYVFFITSSLLLINAVWVYFKVYKKLNLKEIV
Sequences:
>Translated_399_residues MKMWKKNLIVCWFGMFITSIGMSQIAPVLPLYIRHLGVNSSSLVEEFSGIAFGITFIVSAIFSPIWGQAADKFGRKPMLL RASFGMGIIIFSMGFVSNVYVLIVLRLLQGVITGYSTACTTLIATQTDKEHAGWALGTLSTAGIAGSLLGPTIGGFVEEA FGTQNVFFITGALLIIVFIATMLFVKEDFVRENKKVDSMKKVWNSVPEKSLTITILVTFFILTLALYSIEPIMTEYVSKL SRNTSHVAFIAGLVFSASGLANIVAAPRLGKISDKIGPHKIMLGALIVAGIVFIPQAFVKNPWQLMFFRFLLGLASGGLT PSVNILVKKITPTAITGRIFGLSMSAGYLGVFGGSVLGGQVSAYLGIRYVFFITSSLLLINAVWVYFKVYKKLNLKEIV >Mature_399_residues MKMWKKNLIVCWFGMFITSIGMSQIAPVLPLYIRHLGVNSSSLVEEFSGIAFGITFIVSAIFSPIWGQAADKFGRKPMLL RASFGMGIIIFSMGFVSNVYVLIVLRLLQGVITGYSTACTTLIATQTDKEHAGWALGTLSTAGIAGSLLGPTIGGFVEEA FGTQNVFFITGALLIIVFIATMLFVKEDFVRENKKVDSMKKVWNSVPEKSLTITILVTFFILTLALYSIEPIMTEYVSKL SRNTSHVAFIAGLVFSASGLANIVAAPRLGKISDKIGPHKIMLGALIVAGIVFIPQAFVKNPWQLMFFRFLLGLASGGLT PSVNILVKKITPTAITGRIFGLSMSAGYLGVFGGSVLGGQVSAYLGIRYVFFITSSLLLINAVWVYFKVYKKLNLKEIV
Specific function: Confers resistance to fosfomycin and deoxycholate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. MdtG (TC 2.A.1.2.20) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787291, Length=390, Percent_Identity=43.3333333333333, Blast_Score=312, Evalue=2e-86, Organism=Escherichia coli, GI87082404, Length=378, Percent_Identity=24.0740740740741, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43337; Mature: 43337
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMWKKNLIVCWFGMFITSIGMSQIAPVLPLYIRHLGVNSSSLVEEFSGIAFGITFIVSA CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH IFSPIWGQAADKFGRKPMLLRASFGMGIIIFSMGFVSNVYVLIVLRLLQGVITGYSTACT HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH TLIATQTDKEHAGWALGTLSTAGIAGSLLGPTIGGFVEEAFGTQNVFFITGALLIIVFIA HHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH TMLFVKEDFVRENKKVDSMKKVWNSVPEKSLTITILVTFFILTLALYSIEPIMTEYVSKL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRNTSHVAFIAGLVFSASGLANIVAAPRLGKISDKIGPHKIMLGALIVAGIVFIPQAFVK HCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHC NPWQLMFFRFLLGLASGGLTPSVNILVKKITPTAITGRIFGLSMSAGYLGVFGGSVLGGQ CCHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCHHHHEEEEEEECCCCHHHCCCCHHHHH VSAYLGIRYVFFITSSLLLINAVWVYFKVYKKLNLKEIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure MKMWKKNLIVCWFGMFITSIGMSQIAPVLPLYIRHLGVNSSSLVEEFSGIAFGITFIVSA CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH IFSPIWGQAADKFGRKPMLLRASFGMGIIIFSMGFVSNVYVLIVLRLLQGVITGYSTACT HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH TLIATQTDKEHAGWALGTLSTAGIAGSLLGPTIGGFVEEAFGTQNVFFITGALLIIVFIA HHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH TMLFVKEDFVRENKKVDSMKKVWNSVPEKSLTITILVTFFILTLALYSIEPIMTEYVSKL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRNTSHVAFIAGLVFSASGLANIVAAPRLGKISDKIGPHKIMLGALIVAGIVFIPQAFVK HCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHC NPWQLMFFRFLLGLASGGLTPSVNILVKKITPTAITGRIFGLSMSAGYLGVFGGSVLGGQ CCHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCHHHHEEEEEEECCCCHHHCCCCHHHHH VSAYLGIRYVFFITSSLLLINAVWVYFKVYKKLNLKEIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA