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Identifier: 15004719

GI number: 15004719

Start: 15822

End: 16667

Strand: Direct

Name: Not Available

Synonym: CA_P0015

Alternate gene names: 15004719

Gene position: 15822-16667 (Clockwise)

Preceding gene: 15004716

Following gene: 15004729

Centisome position: 8.24

GC content: 27.3

Gene sequence:

>846_bases
ATGAAAAGGGCAAATTATAAAATATTATATGCAGTTATGGTGGTATTAATTTTTGGACTACTATTTAGTGGCAGTAATAA
TATAAAGGCAGATACTATAACTGGAAAAAACAACAATAATATAACGGTTATTGCACATCGAGGTATATATTTTAATGAAC
CAGAAAATTCCCTTGAGGCAATTGAAGATTCAATAAAACACAAGGTAGATTATGCCGAAATTGACGTTCAAGAAACAAAC
GATGGTGTTGTAGTTTTAATGCATGATAAAAATTTAAGAAGACTAGCAGGAGTAAATAAAACTGTTGATGAGTTAAGTTA
TAATGATATTGAAAAGTTAAATATATCAAGAGGGATTTTTAATAAAAAGAAGATAACTAGAATTCCAACACTTAATAGTG
TAATTAGAAAGTGTGATAATAGAGTTAAGCTAATAATAGAAATTAAGCCATATGGAAATACCGTAGATTTAACTAATAAG
GTTGTTGATATTATCAAAAAAAATAATTTTGAGAAAAAATGTTTGGTTCACTCTATGAGTTATAGAATATTAGTTCAAGT
GAAATCTTTGGATTCTGAAATAAAGACTGGATATATAGTATGTAGGCCAGTAAGAAATTTATCTGCATTTAATGTTGATT
TTTTTAGTGTAAGAAATATTTGCGCCACTAAAAAAGTAGTTTCTATAATTCATTCAAAGCATAAAAAAATATTTGTATGG
ACAGTAGATAATCCATATGCTATGCAGCATGTTGTTAGTTTAAAAGCAGATGGAATAATAACAGATCGACCTAGTATCTT
AATGGGTAAAAGAGTTAATAAAGTAACTAAGGCAAAGAAGTTTTAA

Upstream 100 bases:

>100_bases
TTTTTAGTGGATACATTAGCTATAATCCAGTATTATATGTATTAATTATAAGTGGAATTCGTGAGATAATATTAGTTAAT
AGATGAGGAGGGAATAGTCT

Downstream 100 bases:

>100_bases
TTAATATGGTGCTTTATTAATCTGTATTCAATTAAGGTTAATATTACTATTGCGAGATCAAAGATACTTAAAACATTGAG
CCATATTGAATATTTAATAG

Product: GLPQ related phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKRANYKILYAVMVVLIFGLLFSGSNNIKADTITGKNNNNITVIAHRGIYFNEPENSLEAIEDSIKHKVDYAEIDVQETN
DGVVVLMHDKNLRRLAGVNKTVDELSYNDIEKLNISRGIFNKKKITRIPTLNSVIRKCDNRVKLIIEIKPYGNTVDLTNK
VVDIIKKNNFEKKCLVHSMSYRILVQVKSLDSEIKTGYIVCRPVRNLSAFNVDFFSVRNICATKKVVSIIHSKHKKIFVW
TVDNPYAMQHVVSLKADGIITDRPSILMGKRVNKVTKAKKF

Sequences:

>Translated_281_residues
MKRANYKILYAVMVVLIFGLLFSGSNNIKADTITGKNNNNITVIAHRGIYFNEPENSLEAIEDSIKHKVDYAEIDVQETN
DGVVVLMHDKNLRRLAGVNKTVDELSYNDIEKLNISRGIFNKKKITRIPTLNSVIRKCDNRVKLIIEIKPYGNTVDLTNK
VVDIIKKNNFEKKCLVHSMSYRILVQVKSLDSEIKTGYIVCRPVRNLSAFNVDFFSVRNICATKKVVSIIHSKHKKIFVW
TVDNPYAMQHVVSLKADGIITDRPSILMGKRVNKVTKAKKF
>Mature_281_residues
MKRANYKILYAVMVVLIFGLLFSGSNNIKADTITGKNNNNITVIAHRGIYFNEPENSLEAIEDSIKHKVDYAEIDVQETN
DGVVVLMHDKNLRRLAGVNKTVDELSYNDIEKLNISRGIFNKKKITRIPTLNSVIRKCDNRVKLIIEIKPYGNTVDLTNK
VVDIIKKNNFEKKCLVHSMSYRILVQVKSLDSEIKTGYIVCRPVRNLSAFNVDFFSVRNICATKKVVSIIHSKHKKIFVW
TVDNPYAMQHVVSLKADGIITDRPSILMGKRVNKVTKAKKF

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Homo sapiens, GI146198640, Length=269, Percent_Identity=23.4200743494424, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI7706617, Length=170, Percent_Identity=28.2352941176471, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI260763876, Length=267, Percent_Identity=24.7191011235955, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI260763880, Length=217, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1789858, Length=238, Percent_Identity=26.0504201680672, Blast_Score=72, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17561436, Length=181, Percent_Identity=28.7292817679558, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17556807, Length=162, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6325050, Length=247, Percent_Identity=22.2672064777328, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 32024; Mature: 32024

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRANYKILYAVMVVLIFGLLFSGSNNIKADTITGKNNNNITVIAHRGIYFNEPENSLEA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCEEECCCCHHHHH
IEDSIKHKVDYAEIDVQETNDGVVVLMHDKNLRRLAGVNKTVDELSYNDIEKLNISRGIF
HHHHHHHCCCEEEEEEEECCCCEEEEEECCCCHHHHCCCHHHHHCCCCCHHHHHHHCCCC
NKKKITRIPTLNSVIRKCDNRVKLIIEIKPYGNTVDLTNKVVDIIKKNNFEKKCLVHSMS
CCCCEEECCCHHHHHHHCCCCEEEEEEEECCCCEEHHHHHHHHHHHCCCCHHHHHHHHCC
YRILVQVKSLDSEIKTGYIVCRPVRNLSAFNVDFFSVRNICATKKVVSIIHSKHKKIFVW
EEEEEEEECCCCHHCCCEEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
TVDNPYAMQHVVSLKADGIITDRPSILMGKRVNKVTKAKKF
ECCCCHHHHHHHHHCCCCEEECCCCEECCCHHHHHHHHCCC
>Mature Secondary Structure
MKRANYKILYAVMVVLIFGLLFSGSNNIKADTITGKNNNNITVIAHRGIYFNEPENSLEA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCEEECCCCHHHHH
IEDSIKHKVDYAEIDVQETNDGVVVLMHDKNLRRLAGVNKTVDELSYNDIEKLNISRGIF
HHHHHHHCCCEEEEEEEECCCCEEEEEECCCCHHHHCCCHHHHHCCCCCHHHHHHHCCCC
NKKKITRIPTLNSVIRKCDNRVKLIIEIKPYGNTVDLTNKVVDIIKKNNFEKKCLVHSMS
CCCCEEECCCHHHHHHHCCCCEEEEEEEECCCCEEHHHHHHHHHHHCCCCHHHHHHHHCC
YRILVQVKSLDSEIKTGYIVCRPVRNLSAFNVDFFSVRNICATKKVVSIIHSKHKKIFVW
EEEEEEEECCCCHHCCCEEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
TVDNPYAMQHVVSLKADGIITDRPSILMGKRVNKVTKAKKF
ECCCCHHHHHHHHHCCCCEEECCCCEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]