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The map label for this gene is pedb

Identifier: 15004716

GI number: 15004716

Start: 13016

End: 13348

Strand: Direct

Name: pedb

Synonym: CA_P0012

Alternate gene names: 15004716

Gene position: 13016-13348 (Clockwise)

Preceding gene: 15004715

Following gene: 15004719

Centisome position: 6.78

GC content: 31.53

Gene sequence:

>333_bases
ATGAAAAAGAAAAAAGATGAAGAAACAGCAATTAGCCTATTTAATACTTTTAAAAGTTTGATTTTGGAAAAGAGTTCACA
AAATAATGGATATTCTAAAGTTATAGACATTTTAAATCGTGCGATTGAACGCGTTGCAAAGGGAAGTCAAACACCACAAA
TGGAGGCACGATCAGTATTTCAAAACACTTGCACAATGTGTCTTGTAGAAAAAGTAAAATTAAATGAAGAAGAAGCTGCT
GCTTTAAAGGAAATAGACCATTTCTCACATTCGAAAGGCATTTGGGGAGAAATGAATAATTTGAATATTTCAAATATGTG
GCCCAGTAATTAA

Upstream 100 bases:

>100_bases
ACCTTTGGTAGATATTGAGCTATACTTTCCAGTAAAGGAAATGTCAATAGTGGAAAACTTTGTACTGTAAAGTTAATTTT
TATAAGGGGGAAAATAGCAA

Downstream 100 bases:

>100_bases
TTTTTAACAAAATCATAAAGATTAAGTTCTAAGAAGAATGATTTGGAGATCTTCGGATGTTACGACGTTATAGTATTAAG
TTTATGACTTTTTATAATTA

Product: pediocin immunity protein, PedB

Products: NA

Alternate protein names: Pediocin ACH immunity protein [H]

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKKKKDEETAISLFNTFKSLILEKSSQNNGYSKVIDILNRAIERVAKGSQTPQMEARSVFQNTCTMCLVEKVKLNEEEAA
ALKEIDHFSHSKGIWGEMNNLNISNMWPSN

Sequences:

>Translated_110_residues
MKKKKDEETAISLFNTFKSLILEKSSQNNGYSKVIDILNRAIERVAKGSQTPQMEARSVFQNTCTMCLVEKVKLNEEEAA
ALKEIDHFSHSKGIWGEMNNLNISNMWPSN
>Mature_110_residues
MKKKKDEETAISLFNTFKSLILEKSSQNNGYSKVIDILNRAIERVAKGSQTPQMEARSVFQNTCTMCLVEKVKLNEEEAA
ALKEIDHFSHSKGIWGEMNNLNISNMWPSN

Specific function: Imparts immunity to pediocin PA-1/ACH to naturally sensitive host strains [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015046 [H]

Pfam domain/function: PF08951 EntA_Immun [H]

EC number: NA

Molecular weight: Translated: 12508; Mature: 12508

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKKDEETAISLFNTFKSLILEKSSQNNGYSKVIDILNRAIERVAKGSQTPQMEARSVF
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QNTCTMCLVEKVKLNEEEAAALKEIDHFSHSKGIWGEMNNLNISNMWPSN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKKKDEETAISLFNTFKSLILEKSSQNNGYSKVIDILNRAIERVAKGSQTPQMEARSVF
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QNTCTMCLVEKVKLNEEEAAALKEIDHFSHSKGIWGEMNNLNISNMWPSN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1514784; 7764941 [H]