| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
Click here to switch to the map view.
The map label for this gene is yejE [H]
Identifier: 15595091
GI number: 15595091
Start: 789947
End: 790807
Strand: Reverse
Name: yejE [H]
Synonym: BB0746
Alternate gene names: 15595091
Gene position: 790807-789947 (Counterclockwise)
Preceding gene: 15595092
Following gene: 15595086
Centisome position: 86.83
GC content: 26.95
Gene sequence:
>861_bases ATGAAAACAGATACAATAATAAAAAAAATTTATATCGTACTCTTTAATATATTTATTGTGTTGCTAATTATTACTCCGTC ATTGGTTAATGAAAATTCAAAAATTGCAATCTATAAAAAAGATCCAAATAAAGTCTATTTAAAATCTATTAAAAATGTAC CTATGCCACCCACAAAAGACAACCCATTAGGAATCGACAAAATGGGAAGAGATATTATGGCAAGATTAATAATTGCAACC AGAAACTCTATTTTACTTTCACTAAGCTACGCAACAATTTCTGCAATAATTGGAATCTTTATTGGAACAATCATTGGCAT GTTTAGTTTTGAAATTTGCATGCTGATTTCAAAACCAATTGAAACATTGCAAACATTACCTTTTTTTTACGTTGTGTCTT TAGTTTTTTATTACTTTTTAAAACAAAAAACTTACAATATGCTTCAAACAGCAACACTATTAGCATTGATTCATGGATGG ATTAGATTTGCTTTTATTGCAAGAAACAATACATTAATAATAAAAAATTTAGATTATATTAAAGCCAGCGAAGCTATGGG AGCAAGCAAAATTAGAATAATATTGTATCATATTTTTCCAGAAGTATTCTCATCAATATCATCTATAATCCCATTACAAA TGGGAAGAAGTCTTACTACTTTTGAAGTAGTAAGTTTTTTACAAAAACAAGATAAAAATCTATATCCCAGTCTTGGAGAA CTGCTCAACTATATGCAAATGGGCAATAAATATCTATGGATATGGATCAATCCCTTACTCATATTAATAGGCATAAACAT AATACTAGCAATTATAAATTTTAAGCTAAGAAAAAAAATGAAACATTTAATATCATCTTAA
Upstream 100 bases:
>100_bases AAGATTTGATTTTTATTGGCGTTTTCATTATGCTTATTCCAAATATAATAACAGATATACTAATTTACAAAATTAACCCA TATAAGGACACTCTAAACTA
Downstream 100 bases:
>100_bases ATAAAAAATTAACAAACTCTTGGAGCAAATTTTTCTAAAAAACAATTATCACAATTTACATTTCTAGAAGTACAAATTTC TCTTGCATGCTTATTAATAG
Product: peptide ABC transporter permease
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKTDTIIKKIYIVLFNIFIVLLIITPSLVNENSKIAIYKKDPNKVYLKSIKNVPMPPTKDNPLGIDKMGRDIMARLIIAT RNSILLSLSYATISAIIGIFIGTIIGMFSFEICMLISKPIETLQTLPFFYVVSLVFYYFLKQKTYNMLQTATLLALIHGW IRFAFIARNNTLIIKNLDYIKASEAMGASKIRIILYHIFPEVFSSISSIIPLQMGRSLTTFEVVSFLQKQDKNLYPSLGE LLNYMQMGNKYLWIWINPLLILIGINIILAIINFKLRKKMKHLISS
Sequences:
>Translated_286_residues MKTDTIIKKIYIVLFNIFIVLLIITPSLVNENSKIAIYKKDPNKVYLKSIKNVPMPPTKDNPLGIDKMGRDIMARLIIAT RNSILLSLSYATISAIIGIFIGTIIGMFSFEICMLISKPIETLQTLPFFYVVSLVFYYFLKQKTYNMLQTATLLALIHGW IRFAFIARNNTLIIKNLDYIKASEAMGASKIRIILYHIFPEVFSSISSIIPLQMGRSLTTFEVVSFLQKQDKNLYPSLGE LLNYMQMGNKYLWIWINPLLILIGINIILAIINFKLRKKMKHLISS >Mature_286_residues MKTDTIIKKIYIVLFNIFIVLLIITPSLVNENSKIAIYKKDPNKVYLKSIKNVPMPPTKDNPLGIDKMGRDIMARLIIAT RNSILLSLSYATISAIIGIFIGTIIGMFSFEICMLISKPIETLQTLPFFYVVSLVFYYFLKQKTYNMLQTATLLALIHGW IRFAFIARNNTLIIKNLDYIKASEAMGASKIRIILYHIFPEVFSSISSIIPLQMGRSLTTFEVVSFLQKQDKNLYPSLGE LLNYMQMGNKYLWIWINPLLILIGINIILAIINFKLRKKMKHLISS
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4239
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788505, Length=192, Percent_Identity=30.7291666666667, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1787054, Length=187, Percent_Identity=25.668449197861, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787760, Length=199, Percent_Identity=24.6231155778894, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32785; Mature: 32785
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDTIIKKIYIVLFNIFIVLLIITPSLVNENSKIAIYKKDPNKVYLKSIKNVPMPPTKD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCCCC NPLGIDKMGRDIMARLIIATRNSILLSLSYATISAIIGIFIGTIIGMFSFEICMLISKPI CCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLQTLPFFYVVSLVFYYFLKQKTYNMLQTATLLALIHGWIRFAFIARNNTLIIKNLDYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCHH KASEAMGASKIRIILYHIFPEVFSSISSIIPLQMGRSLTTFEVVSFLQKQDKNLYPSLGE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH LLNYMQMGNKYLWIWINPLLILIGINIILAIINFKLRKKMKHLISS HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTDTIIKKIYIVLFNIFIVLLIITPSLVNENSKIAIYKKDPNKVYLKSIKNVPMPPTKD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCCCC NPLGIDKMGRDIMARLIIATRNSILLSLSYATISAIIGIFIGTIIGMFSFEICMLISKPI CCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLQTLPFFYVVSLVFYYFLKQKTYNMLQTATLLALIHGWIRFAFIARNNTLIIKNLDYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCHH KASEAMGASKIRIILYHIFPEVFSSISSIIPLQMGRSLTTFEVVSFLQKQDKNLYPSLGE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH LLNYMQMGNKYLWIWINPLLILIGINIILAIINFKLRKKMKHLISS HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]