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The map label for this gene is oppB [H]

Identifier: 15595092

GI number: 15595092

Start: 790807

End: 791787

Strand: Reverse

Name: oppB [H]

Synonym: BB0747

Alternate gene names: 15595092

Gene position: 791787-790807 (Counterclockwise)

Preceding gene: 15595093

Following gene: 15595091

Centisome position: 86.94

GC content: 25.38

Gene sequence:

>981_bases
TTGAAAATATTTATTTTTAAAAATACAATATATTTATTAATTAATTTAATTTGTGCATCATTTTTTTGCGTATCGTTAGT
AAATCTTTTTTCAAATGAACAACAGTATACTCCTTTTGTTAAAACAAATGTCATAAAAAATTACTTACAATACATTGGAG
TATATAAAAGTATAGAAAGATATGCCCTGATACATGACTTTAACCCTAAATCAAAATTAGAAAAAGATTGCTTTTTGAAG
CATATAGCTGGCAATTCATATATAATATACAAAACAAAAAATGAAGGAATGCTGTGGGGCGATCATCGATACTCTCTGCT
GAGCAAAGGAAAGCCAACTACTAAAATAATTTTTCAAAAAATATTTAATACTTTAAAAATCTCAATTCCAGGCGCCCTAC
TCTCTTATATTGCGGCAATAATCCTTATTATAATTTGGAAAATTTACATAAAAAATAATCTAATAAATAATATTCTAGAA
TATTTAATGCTATTGCTCCACTCCATGCCAAGAAACTTAACAGTATTTTTAATACTGTCTTTAATATATTACCTTAATTT
AAATCCAAAAAATTTAATAATGGGTGGATTTGCATGGTTTTTTTCATTCTTCATATTTAATTCTGTAATTTTTAAACAAT
CTCTTGACAAAACTTTATCAGAATTTTACATAAAAGCTGCAAAATCAAGAGGAATAAATAAATTGCAAATAATCTTAAAA
CATGCATTAATTCCATCAATAACACCATTACTCACAAACATGAGACCTATTATTACAACAGCTTTTTTTGGAGCATCAAT
GATTGAATCAATGTTTGAAATTGATGGAATTGGGGCCTTATATTTAAATGCTTTGAAATTTAACGATTATGCTATTTCTA
AAGATTTGATTTTTATTGGCGTTTTCATTATGCTTATTCCAAATATAATAACAGATATACTAATTTACAAAATTAACCCA
TATAAGGACACTCTAAACTAA

Upstream 100 bases:

>100_bases
AGGTTTAATTTATTATTTTTTATCAAGCTGCATTATCCAAACCAAGAAAATTACAAAAATCAATAAACTTGCTTCCAACA
ACTCTAAGGATTAGTCTTTA

Downstream 100 bases:

>100_bases
TGAAAACAGATACAATAATAAAAAAAATTTATATCGTACTCTTTAATATATTTATTGTGTTGCTAATTATTACTCCGTCA
TTGGTTAATGAAAATTCAAA

Product: peptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKIFIFKNTIYLLINLICASFFCVSLVNLFSNEQQYTPFVKTNVIKNYLQYIGVYKSIERYALIHDFNPKSKLEKDCFLK
HIAGNSYIIYKTKNEGMLWGDHRYSLLSKGKPTTKIIFQKIFNTLKISIPGALLSYIAAIILIIIWKIYIKNNLINNILE
YLMLLLHSMPRNLTVFLILSLIYYLNLNPKNLIMGGFAWFFSFFIFNSVIFKQSLDKTLSEFYIKAAKSRGINKLQIILK
HALIPSITPLLTNMRPIITTAFFGASMIESMFEIDGIGALYLNALKFNDYAISKDLIFIGVFIMLIPNIITDILIYKINP
YKDTLN

Sequences:

>Translated_326_residues
MKIFIFKNTIYLLINLICASFFCVSLVNLFSNEQQYTPFVKTNVIKNYLQYIGVYKSIERYALIHDFNPKSKLEKDCFLK
HIAGNSYIIYKTKNEGMLWGDHRYSLLSKGKPTTKIIFQKIFNTLKISIPGALLSYIAAIILIIIWKIYIKNNLINNILE
YLMLLLHSMPRNLTVFLILSLIYYLNLNPKNLIMGGFAWFFSFFIFNSVIFKQSLDKTLSEFYIKAAKSRGINKLQIILK
HALIPSITPLLTNMRPIITTAFFGASMIESMFEIDGIGALYLNALKFNDYAISKDLIFIGVFIMLIPNIITDILIYKINP
YKDTLN
>Mature_326_residues
MKIFIFKNTIYLLINLICASFFCVSLVNLFSNEQQYTPFVKTNVIKNYLQYIGVYKSIERYALIHDFNPKSKLEKDCFLK
HIAGNSYIIYKTKNEGMLWGDHRYSLLSKGKPTTKIIFQKIFNTLKISIPGALLSYIAAIILIIIWKIYIKNNLINNILE
YLMLLLHSMPRNLTVFLILSLIYYLNLNPKNLIMGGFAWFFSFFIFNSVIFKQSLDKTLSEFYIKAAKSRGINKLQIILK
HALIPSITPLLTNMRPIITTAFFGASMIESMFEIDGIGALYLNALKFNDYAISKDLIFIGVFIMLIPNIITDILIYKINP
YKDTLN

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=112, Percent_Identity=33.0357142857143, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1789965, Length=109, Percent_Identity=26.605504587156, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37713; Mature: 37713

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFIFKNTIYLLINLICASFFCVSLVNLFSNEQQYTPFVKTNVIKNYLQYIGVYKSIER
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YALIHDFNPKSKLEKDCFLKHIAGNSYIIYKTKNEGMLWGDHRYSLLSKGKPTTKIIFQK
HHHEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCHHHHHHHCCCCHHHHHHHH
IFNTLKISIPGALLSYIAAIILIIIWKIYIKNNLINNILEYLMLLLHSMPRNLTVFLILS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LIYYLNLNPKNLIMGGFAWFFSFFIFNSVIFKQSLDKTLSEFYIKAAKSRGINKLQIILK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HALIPSITPLLTNMRPIITTAFFGASMIESMFEIDGIGALYLNALKFNDYAISKDLIFIG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH
VFIMLIPNIITDILIYKINPYKDTLN
HHHHHHHHHHHHHHEEEECCCCCCCC
>Mature Secondary Structure
MKIFIFKNTIYLLINLICASFFCVSLVNLFSNEQQYTPFVKTNVIKNYLQYIGVYKSIER
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YALIHDFNPKSKLEKDCFLKHIAGNSYIIYKTKNEGMLWGDHRYSLLSKGKPTTKIIFQK
HHHEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCHHHHHHHCCCCHHHHHHHH
IFNTLKISIPGALLSYIAAIILIIIWKIYIKNNLINNILEYLMLLLHSMPRNLTVFLILS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LIYYLNLNPKNLIMGGFAWFFSFFIFNSVIFKQSLDKTLSEFYIKAAKSRGINKLQIILK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HALIPSITPLLTNMRPIITTAFFGASMIESMFEIDGIGALYLNALKFNDYAISKDLIFIG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH
VFIMLIPNIITDILIYKINPYKDTLN
HHHHHHHHHHHHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]