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The map label for this gene is ybhL [C]

Identifier: 15594884

GI number: 15594884

Start: 548920

End: 549618

Strand: Reverse

Name: ybhL [C]

Synonym: BB0539

Alternate gene names: 15594884

Gene position: 549618-548920 (Counterclockwise)

Preceding gene: 15594885

Following gene: 15594883

Centisome position: 60.35

GC content: 30.62

Gene sequence:

>699_bases
ATGATCGATTTAACACAAGAAAAACAAGAAATACTAATAAAAAACAAGTTTTTAGCCAAAGTTTTCGGGCTTATGTCAAT
TGGACTTTTAATCTCAGCAGTATTTGCATATGCAACCTCAGAAAATCAAACAATCAAAGCAATAATATTCTCAAATTCAA
TGTCATTTATGGCTATGATACTTATACAATTTGGACTTGTATATGCAATAAGTGGTGCTCTTAATAAAATATCAAGCAAT
ACTGCAACAGCTCTTTTCTTGCTCTACTCAGCACTAACAGGAGTAACATTATCTTCTATATTTATGATTTACACACAAGG
ATCAATAGTATTCACATTCGGAATTACTGCTGGAACATTTCTTGGAATGTCTGTTTATGGATACACTACAACAACAGATC
TAACAAAAATGGGAAGCTATTTAATAATGGGCTTATGGGGAATCATTATTGCATCTCTTGTTAATATGTTTTTTAGAAGC
TCAGGTCTTAATTTCCTTATATCTATTTTGGGCGTAGTTATATTTACAGGCTTAACAGCTTATGATGTTCAAAATATTTC
TAAAATGGACAAAATGCTACAAGACGACACTGAAATAAAAAACAGAATGGCGGTTGTAGCCTCACTTAAACTTTATTTAG
ATTTTATAAATTTATTCTTATATCTTCTAAGATTTTTGGGCCAAAGAAGAAACGATTAA

Upstream 100 bases:

>100_bases
TCTTAAGGTATGGAAAAGTTCCAAGCACTATATTTGATGAACTTCGCAAAAAATTTAACGATCAAAACAAATCTTAATAA
AATAATAAGGAGGCTTTATT

Downstream 100 bases:

>100_bases
AATAATAAAAAAATCATAAAAAATTCAATCAAAAATGAATGCTTTAACTTTAAAGCATTCATTTTTAGAGGTTTCAATGA
GTATAGATAGCTTAGAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIDLTQEKQEILIKNKFLAKVFGLMSIGLLISAVFAYATSENQTIKAIIFSNSMSFMAMILIQFGLVYAISGALNKISSN
TATALFLLYSALTGVTLSSIFMIYTQGSIVFTFGITAGTFLGMSVYGYTTTTDLTKMGSYLIMGLWGIIIASLVNMFFRS
SGLNFLISILGVVIFTGLTAYDVQNISKMDKMLQDDTEIKNRMAVVASLKLYLDFINLFLYLLRFLGQRRND

Sequences:

>Translated_232_residues
MIDLTQEKQEILIKNKFLAKVFGLMSIGLLISAVFAYATSENQTIKAIIFSNSMSFMAMILIQFGLVYAISGALNKISSN
TATALFLLYSALTGVTLSSIFMIYTQGSIVFTFGITAGTFLGMSVYGYTTTTDLTKMGSYLIMGLWGIIIASLVNMFFRS
SGLNFLISILGVVIFTGLTAYDVQNISKMDKMLQDDTEIKNRMAVVASLKLYLDFINLFLYLLRFLGQRRND
>Mature_232_residues
MIDLTQEKQEILIKNKFLAKVFGLMSIGLLISAVFAYATSENQTIKAIIFSNSMSFMAMILIQFGLVYAISGALNKISSN
TATALFLLYSALTGVTLSSIFMIYTQGSIVFTFGITAGTFLGMSVYGYTTTTDLTKMGSYLIMGLWGIIIASLVNMFFRS
SGLNFLISILGVVIFTGLTAYDVQNISKMDKMLQDDTEIKNRMAVVASLKLYLDFINLFLYLLRFLGQRRND

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family

Homologues:

Organism=Homo sapiens, GI116812579, Length=216, Percent_Identity=27.3148148148148, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1787004, Length=217, Percent_Identity=44.2396313364055, Blast_Score=185, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y539_BORBU (O51489)

Other databases:

- EMBL:   AE000783
- PIR:   B70167
- RefSeq:   NP_212673.1
- EnsemblBacteria:   EBBORT00000008886
- GeneID:   1195386
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0539
- NMPDR:   fig|224326.1.peg.923
- TIGR:   BB_0539
- GeneTree:   EBGT00050000007576
- HOGENOM:   HBG595196
- OMA:   WGSFLFM
- PhylomeDB:   O51489
- ProtClustDB:   CLSK507647
- BioCyc:   BBUR224326:BB_0539-MONOMER
- InterPro:   IPR006214
- PANTHER:   PTHR23291

Pfam domain/function: PF01027 UPF0005

EC number: NA

Molecular weight: Translated: 25709; Mature: 25709

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb0e7a64)-; HASH(0xca681f8)-; HASH(0xbdac7d4)-; HASH(0xcd65938)-; HASH(0xc97f4c0)-; HASH(0xcd845ac)-; HASH(0xbea32bc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLTQEKQEILIKNKFLAKVFGLMSIGLLISAVFAYATSENQTIKAIIFSNSMSFMAMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHH
LIQFGLVYAISGALNKISSNTATALFLLYSALTGVTLSSIFMIYTQGSIVFTFGITAGTF
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCHHHHH
LGMSVYGYTTTTDLTKMGSYLIMGLWGIIIASLVNMFFRSSGLNFLISILGVVIFTGLTA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
YDVQNISKMDKMLQDDTEIKNRMAVVASLKLYLDFINLFLYLLRFLGQRRND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MIDLTQEKQEILIKNKFLAKVFGLMSIGLLISAVFAYATSENQTIKAIIFSNSMSFMAMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHH
LIQFGLVYAISGALNKISSNTATALFLLYSALTGVTLSSIFMIYTQGSIVFTFGITAGTF
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCHHHHH
LGMSVYGYTTTTDLTKMGSYLIMGLWGIIIASLVNMFFRSSGLNFLISILGVVIFTGLTA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
YDVQNISKMDKMLQDDTEIKNRMAVVASLKLYLDFINLFLYLLRFLGQRRND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685