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The map label for this gene is ctpA [H]

Identifier: 15594704

GI number: 15594704

Start: 366964

End: 368391

Strand: Reverse

Name: ctpA [H]

Synonym: BB0359

Alternate gene names: 15594704

Gene position: 368391-366964 (Counterclockwise)

Preceding gene: 15594710

Following gene: 15594703

Centisome position: 40.45

GC content: 29.22

Gene sequence:

>1428_bases
ATGAAAAATAAATTTTTAATATGTGTATATTTTTTATTGACTCTGGGTATAAGCTCTTTAGTAATTGTTGAATCTATTTT
TGCTTTTGATGAATCTAATAATAAGTTATCAAGATCAAATTATGAGCAGATGATGATTCAAGCTTTTGAATTTGTAAAAG
AAAATTATGTTGATCCTGTAAGTGATGAAGTAATTTTTGAAGGTGCTTTAAAAGGAATATTTCAATCCCTAGGCGATCCT
TATTCTCAATATTTGACAAAAAAAGATTTAGAAGAAATTTCAAAAACAACAGTAGGAGATTATGTTGGCATTGGAATTTC
TATAATAAAAAAAATGCATTCCCAAGATAAGCAAGACAAGGCAAAAGATTTTGATCCTAATAGTGCTTGTGTTTCTATTG
TTACGCCTTTTGAAGGAGGTCCGGCTTATAAGGCTGGAATTAAATCTGGAGATTGTATTACCGCTGTTGATGGCAAGAGT
GTTTATTCTATGGAAGTAGATCAAGTTGTTGATCTTTTAAAAGGTAAAGAAGGCACAAAAGTTAAAGTATCTATTCTTAG
GGGAAAAAATTTAACATTGGATTTTGAACTTACAAGAGAGAAGATAGAAATACAAACRATCAAGTATGACGTTATTAATT
CAGATATTGGCTATATAAGAATAGTAAGCTTTAATCCACACACCTCTGTAGATTTTAGAAAAGCTTTAGATAATCTTAAG
AATAAAAATATTAAATCTTTAATTTTAGATTTAAGGCTTAATACCGGAGGATATTTTCAGGCAGCTATAAAAATGGCGGA
TGATATTTTATCTAAAGGAATTATTGTTTCCACAAAATCAAGAAATTCTAGCAAGCCTATTGATTATAAGGCAAGCTCAA
AACAAGTTTTGCCTTCAAATATAAAAATTGTTGCTTTAATAGACAGATCATCAGCCTCAGCATCAGAGGTTTTTGTAGGA
GCCTTAAAAGACAATAAGAGAGCATACATTATAGGGGAAAAGTCTTATGGCAAGGGGCTTATTCAGCATGTAGTTCCTTT
TTATACTGGTGGATTTAAAATTACAAGCTCAAAGTATTATACTCCATCTGGAAAGAGTATTCATAAGGTTGGAATTGAGC
CTGATTTGGAAATAAAATCTCCAGATTTTTCTGAGGAGGAGGCATTAATATATAAAGAAATTTTTGATAAAAAGCTGATA
GAAGGTTTTTTGAAGGGTAAAAAATTCATTACCGAACAAGAGATTGATTTTTTTGTTGAGAATCTTGTAAAAGAAAATCC
AAAATATAAAATTGATAAAGAATTTTTAGGCAAGTATGTGTTTTTTAATTACTATCAGGACAATAATAAAGAATTGCCAA
TTTATAATCTACATTATGACAAAGTTTTAAAAACAGCTTGTGAGTATTTGTCTAAATTAGGTAATTAA

Upstream 100 bases:

>100_bases
AAGGCTTTGTGTTTTTTTAGGATGTGAGTTTAACATAGTTTTAAAATATTATATTATGGAAATAAAATCAAGTTTTAATT
TTTGCATTAGGAATGAATAA

Downstream 100 bases:

>100_bases
ATTGTGAAGCAAATTGTTTTGGATGAGAATTGTTTAGCAGGTAATTTTATTATTGTTAAAGATGCAAAAATATATCACCA
TCTTGTTAATGTAAGACGAC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MKNKFLICVYFLLTLGISSLVIVESIFAFDESNNKLSRSNYEQMMIQAFEFVKENYVDPVSDEVIFEGALKGIFQSLGDP
YSQYLTKKDLEEISKTTVGDYVGIGISIIKKMHSQDKQDKAKDFDPNSACVSIVTPFEGGPAYKAGIKSGDCITAVDGKS
VYSMEVDQVVDLLKGKEGTKVKVSILRGKNLTLDFELTREKIEIQTIKYDVINSDIGYIRIVSFNPHTSVDFRKALDNLK
NKNIKSLILDLRLNTGGYFQAAIKMADDILSKGIIVSTKSRNSSKPIDYKASSKQVLPSNIKIVALIDRSSASASEVFVG
ALKDNKRAYIIGEKSYGKGLIQHVVPFYTGGFKITSSKYYTPSGKSIHKVGIEPDLEIKSPDFSEEEALIYKEIFDKKLI
EGFLKGKKFITEQEIDFFVENLVKENPKYKIDKEFLGKYVFFNYYQDNNKELPIYNLHYDKVLKTACEYLSKLGN

Sequences:

>Translated_475_residues
MKNKFLICVYFLLTLGISSLVIVESIFAFDESNNKLSRSNYEQMMIQAFEFVKENYVDPVSDEVIFEGALKGIFQSLGDP
YSQYLTKKDLEEISKTTVGDYVGIGISIIKKMHSQDKQDKAKDFDPNSACVSIVTPFEGGPAYKAGIKSGDCITAVDGKS
VYSMEVDQVVDLLKGKEGTKVKVSILRGKNLTLDFELTREKIEIQTIKYDVINSDIGYIRIVSFNPHTSVDFRKALDNLK
NKNIKSLILDLRLNTGGYFQAAIKMADDILSKGIIVSTKSRNSSKPIDYKASSKQVLPSNIKIVALIDRSSASASEVFVG
ALKDNKRAYIIGEKSYGKGLIQHVVPFYTGGFKITSSKYYTPSGKSIHKVGIEPDLEIKSPDFSEEEALIYKEIFDKKLI
EGFLKGKKFITEQEIDFFVENLVKENPKYKIDKEFLGKYVFFNYYQDNNKELPIYNLHYDKVLKTACEYLSKLGN
>Mature_475_residues
MKNKFLICVYFLLTLGISSLVIVESIFAFDESNNKLSRSNYEQMMIQAFEFVKENYVDPVSDEVIFEGALKGIFQSLGDP
YSQYLTKKDLEEISKTTVGDYVGIGISIIKKMHSQDKQDKAKDFDPNSACVSIVTPFEGGPAYKAGIKSGDCITAVDGKS
VYSMEVDQVVDLLKGKEGTKVKVSILRGKNLTLDFELTREKIEIQTIKYDVINSDIGYIRIVSFNPHTSVDFRKALDNLK
NKNIKSLILDLRLNTGGYFQAAIKMADDILSKGIIVSTKSRNSSKPIDYKASSKQVLPSNIKIVALIDRSSASASEVFVG
ALKDNKRAYIIGEKSYGKGLIQHVVPFYTGGFKITSSKYYTPSGKSIHKVGIEPDLEIKSPDFSEEEALIYKEIFDKKLI
EGFLKGKKFITEQEIDFFVENLVKENPKYKIDKEFLGKYVFFNYYQDNNKELPIYNLHYDKVLKTACEYLSKLGN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=445, Percent_Identity=27.8651685393258, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 53542; Mature: 53542

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKFLICVYFLLTLGISSLVIVESIFAFDESNNKLSRSNYEQMMIQAFEFVKENYVDPV
CCCCEEEHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SDEVIFEGALKGIFQSLGDPYSQYLTKKDLEEISKTTVGDYVGIGISIIKKMHSQDKQDK
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
AKDFDPNSACVSIVTPFEGGPAYKAGIKSGDCITAVDGKSVYSMEVDQVVDLLKGKEGTK
HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHCCCCCCE
VKVSILRGKNLTLDFELTREKIEIQTIKYDVINSDIGYIRIVSFNPHTSVDFRKALDNLK
EEEEEEECCCEEEEEEECCCEEEEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHC
NKNIKSLILDLRLNTGGYFQAAIKMADDILSKGIIVSTKSRNSSKPIDYKASSKQVLPSN
CCCHHEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCC
IKIVALIDRSSASASEVFVGALKDNKRAYIIGEKSYGKGLIQHVVPFYTGGFKITSSKYY
CEEEEEEECCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCEEEECCEEE
TPSGKSIHKVGIEPDLEIKSPDFSEEEALIYKEIFDKKLIEGFLKGKKFITEQEIDFFVE
CCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHH
NLVKENPKYKIDKEFLGKYVFFNYYQDNNKELPIYNLHYDKVLKTACEYLSKLGN
HHHHCCCCCEECHHHCCCEEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNKFLICVYFLLTLGISSLVIVESIFAFDESNNKLSRSNYEQMMIQAFEFVKENYVDPV
CCCCEEEHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SDEVIFEGALKGIFQSLGDPYSQYLTKKDLEEISKTTVGDYVGIGISIIKKMHSQDKQDK
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
AKDFDPNSACVSIVTPFEGGPAYKAGIKSGDCITAVDGKSVYSMEVDQVVDLLKGKEGTK
HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHCCCCCCE
VKVSILRGKNLTLDFELTREKIEIQTIKYDVINSDIGYIRIVSFNPHTSVDFRKALDNLK
EEEEEEECCCEEEEEEECCCEEEEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHC
NKNIKSLILDLRLNTGGYFQAAIKMADDILSKGIIVSTKSRNSSKPIDYKASSKQVLPSN
CCCHHEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCC
IKIVALIDRSSASASEVFVGALKDNKRAYIIGEKSYGKGLIQHVVPFYTGGFKITSSKYY
CEEEEEEECCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCEEEECCEEE
TPSGKSIHKVGIEPDLEIKSPDFSEEEALIYKEIFDKKLIEGFLKGKKFITEQEIDFFVE
CCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHH
NLVKENPKYKIDKEFLGKYVFFNYYQDNNKELPIYNLHYDKVLKTACEYLSKLGN
HHHHCCCCCEECHHHCCCEEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]