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The map label for this gene is hbb [H]

Identifier: 15594577

GI number: 15594577

Start: 237630

End: 237956

Strand: Reverse

Name: hbb [H]

Synonym: BB0232

Alternate gene names: 15594577

Gene position: 237956-237630 (Counterclockwise)

Preceding gene: 161511081

Following gene: 15594576

Centisome position: 26.13

GC content: 31.8

Gene sequence:

>327_bases
ATGTCTTTTTCAAGAAGACCAAAGGTTACTAAGTCAGACATTGTTGATCAAATATCTTTGAATATTAAAAATAATAATCT
GAAATTAGAAAAAAAATACATAAGACTTGTAATAGATGCTTTTTTTGAAGAGCTTAAAAGTAATCTTTGTTCGAATAATG
TTATTGAGTTTAGATCTTTTGGTACATTTGAAGTTAGAAAAAGAAAGGGACGCTTAAATGCTCGCAATCCTCAAACAGGG
GAGTATGTTAAGGTCCTAGATCATCACGTTGCGTATTTTCGTCCAGGCAAAGATTTGAAAGAGAGAGTGTGGGGTATCAA
AGGTTAA

Upstream 100 bases:

>100_bases
ACTAGACACTGCTGCTAGAAAGCGAATAATTCATAAAAATAAGGCTGCTAGAAAAAAATCTCGTTTAAATGTTTTGCTGT
TAAAGTAAGGAAATTAGTTT

Downstream 100 bases:

>100_bases
ATGCCGGTTAATATCGTAGATTCTTATAAATGGGATTGTAAGCTAGACTCCAGTTTAACTTTTAGAGGAAAATTAAAATT
TGAAGGAACTTTGTATCTTG

Product: hbbU protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSFSRRPKVTKSDIVDQISLNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTG
EYVKVLDHHVAYFRPGKDLKERVWGIKG

Sequences:

>Translated_108_residues
MSFSRRPKVTKSDIVDQISLNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTG
EYVKVLDHHVAYFRPGKDLKERVWGIKG
>Mature_107_residues
SFSRRPKVTKSDIVDQISLNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGE
YVKVLDHHVAYFRPGKDLKERVWGIKG

Specific function: Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions [H]

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000119
- InterPro:   IPR020816
- InterPro:   IPR010992 [H]

Pfam domain/function: PF00216 Bac_DNA_binding [H]

EC number: NA

Molecular weight: Translated: 12686; Mature: 12555

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS00045 HISTONE_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSRRPKVTKSDIVDQISLNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSF
CCCCCCCCCCHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
GTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIKG
CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
SFSRRPKVTKSDIVDQISLNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSF
CCCCCCCCCHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
GTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIKG
CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8995795 [H]