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The map label for this gene is rpsT

Identifier: 161511081

GI number: 161511081

Start: 237969

End: 238226

Strand: Reverse

Name: rpsT

Synonym: BB0233

Alternate gene names: 161511081

Gene position: 238226-237969 (Counterclockwise)

Preceding gene: 15594579

Following gene: 15594577

Centisome position: 26.16

GC content: 29.07

Gene sequence:

>258_bases
TTGAGAAAAAATGCATCTGCATTGAAGCGCTCTCGTCAAAATTTAAAAAGAAAGATTAGAAATGTAAGTGTAAAAAGTGA
ATTAAAAACAATAGAAAAACGCTGTATCAACATGATAAAAGCGGGTAAGAAAGACGAAGCTATTGAATTTTTTAAATTTG
TTGCAAAAAAACTAGACACTGCTGCTAGAAAGCGAATAATTCATAAAAATAAGGCTGCTAGAAAAAAATCTCGTTTAAAT
GTTTTGCTGTTAAAGTAA

Upstream 100 bases:

>100_bases
AAAACTATTGTACTAAATTAACTTAAATCTTTGATTGACTATATTTGAATTAGTTGATATATTAAAGCTATTGTTTAATA
ATATTATTAAGGAGTATAAC

Downstream 100 bases:

>100_bases
GGAAATTAGTTTATGTCTTTTTCAAGAAGACCAAAGGTTACTAAGTCAGACATTGTTGATCAAATATCTTTGAATATTAA
AAATAATAATCTGAAATTAG

Product: 30S ribosomal protein S20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MRKNASALKRSRQNLKRKIRNVSVKSELKTIEKRCINMIKAGKKDEAIEFFKFVAKKLDTAARKRIIHKNKAARKKSRLN
VLLLK

Sequences:

>Translated_85_residues
MRKNASALKRSRQNLKRKIRNVSVKSELKTIEKRCINMIKAGKKDEAIEFFKFVAKKLDTAARKRIIHKNKAARKKSRLN
VLLLK
>Mature_85_residues
MRKNASALKRSRQNLKRKIRNVSVKSELKTIEKRCINMIKAGKKDEAIEFFKFVAKKLDTAARKRIIHKNKAARKKSRLN
VLLLK

Specific function: Binds directly to 16S ribosomal RNA

COG id: COG0268

COG function: function code J; Ribosomal protein S20

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S20P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS20_BORAP (Q0SNS8)

Other databases:

- EMBL:   CP000395
- RefSeq:   YP_709676.1
- ProteinModelPortal:   Q0SNS8
- SMR:   Q0SNS8
- STRING:   Q0SNS8
- EnsemblBacteria:   EBBORT00000004032
- GeneID:   4227706
- GenomeReviews:   CP000395_GR
- KEGG:   baf:BAPKO_0242
- eggNOG:   COG0268
- GeneTree:   EBGT00050000007092
- HOGENOM:   HBG734145
- OMA:   QNAHNSS
- ProtClustDB:   PRK00239
- BioCyc:   BAFZ390236:BAPKO_0242-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00500
- InterPro:   IPR002583
- Gene3D:   G3DSA:1.20.58.110
- ProDom:   PD004231
- TIGRFAMs:   TIGR00029

Pfam domain/function: PF01649 Ribosomal_S20p; SSF46992 Ribosomal_S20p

EC number: NA

Molecular weight: Translated: 9947; Mature: 9947

Theoretical pI: Translated: 12.11; Mature: 12.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNASALKRSRQNLKRKIRNVSVKSELKTIEKRCINMIKAGKKDEAIEFFKFVAKKLDT
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AARKRIIHKNKAARKKSRLNVLLLK
HHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MRKNASALKRSRQNLKRKIRNVSVKSELKTIEKRCINMIKAGKKDEAIEFFKFVAKKLDT
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AARKRIIHKNKAARKKSRLNVLLLK
HHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA