| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
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The map label for this gene is nagA [H]
Identifier: 15594496
GI number: 15594496
Start: 150974
End: 152179
Strand: Direct
Name: nagA [H]
Synonym: BB0151
Alternate gene names: 15594496
Gene position: 150974-152179 (Clockwise)
Preceding gene: 15594493
Following gene: 15594497
Centisome position: 16.58
GC content: 34.08
Gene sequence:
>1206_bases ATGCCAAATTTTTGCTTATTTAACTCAAAATCCGTTTTAACTGGAAATGATAAAATAGATAACTCAGCGGTTCTAATTAA AGATAATAAAATTTTTGATATTGTAACGTCTGACAGACTTAAAAAAATGGATCTCGAAGAATACCAAATGATTGACACAA AAGGCAATTATATAACTCCCGGACTTTACGACAATCATATTCATGGATTTCACGGTCATGGGACAGACCAGTGTTCAACA GAATCGATACTTAAAATGTCAGAACATTTAGCACAATACGGTGTAGTAGGATTTTTACCAACCCTTTACCCAAGACCAAT AGATGAAATGATTAAAACAATAAAAGCTTGCATAGCAGCAATTGGTAAAGAAAAGGGAGCTAAAATTTTGGGACTTCACC TTGAAGGACCATTTTTCTCTCCTGAAAAAAAAGGAGCTCATCCAGTTTCTTATCTTCATGAACCTAGTATTGAAGTTATG CAAAAACTAATAGATGCAGCTGGTGGAGTATTTACAGGATCAAACGGCAAAAGAAAAACACATATAAGCACAATGACTGT TGCTCCTGAGCTTAAGGGTATGAGAGAGCTTGCAATATTTTGCCTTGAAAACAACATAAACCTTCAAGCGGGACACACAA ATGCAACATATGAAAACATGATAGAAGGATTTCAAGTTGGAATACTTCATACAACCCATTTTTTCAACGCAATGTCAAAA CTTGACCACAGAAATCCAAATGCAATAGGAGCGGTGTTAATACACGGCGATGTTTCTTGCGAAATTATTGCAGATGGCCA CCATATACACCCAAAATTAATTTTAATGCTTAGAAAGCTTAAAGATATAAGTAAAATAGTCCTTGTAACTGACGGACTTA CTCCGAATTGTCAAACTTGTGGAAAACTAATTGCAAACGGAGACGAAGTTTATATTGCAGAAGATGGATTATTCCATAGC GTGAAAAGCAACACAATAGCTGGATCAACACTCACAATGATACAAGGTCTTAAAAATTTAATAGAATTTGGTTTCAGCTT AAGCGATGCTGTTCAAGCAAGCTCTTACAATCCAACAAGAATTCTCAATATTGATAAAAAGGGCTTAATATGTCATGGAT ATGATGCAAACCTCAATGTCCTAGATAAAGATTTTAATCTAAAGTTAACAATGATAGAATCTAAAATAATTTTTAACAAT CTCTAA
Upstream 100 bases:
>100_bases ATGAATTCTTAAGCATCCAAACACTTTAAAATAAAAAATATAAGCTTTAAAAAAGATTAATGCTTATAGTAAAATAAAAT AAATAAAAGGAAAATAAAAA
Downstream 100 bases:
>100_bases CTTTAATCAATTTTAAGGAGATCTCAATGAGATTAATAATCAGACCCACATACGAAGACATATCAAAATGGGCGGCTAAT CATGTAGCACAAAAAATTAA
Product: N-acetylglucosamine-6-phosphate deacetylase
Products: NA
Alternate protein names: GlcNAc 6-P deacetylase [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MPNFCLFNSKSVLTGNDKIDNSAVLIKDNKIFDIVTSDRLKKMDLEEYQMIDTKGNYITPGLYDNHIHGFHGHGTDQCST ESILKMSEHLAQYGVVGFLPTLYPRPIDEMIKTIKACIAAIGKEKGAKILGLHLEGPFFSPEKKGAHPVSYLHEPSIEVM QKLIDAAGGVFTGSNGKRKTHISTMTVAPELKGMRELAIFCLENNINLQAGHTNATYENMIEGFQVGILHTTHFFNAMSK LDHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLILMLRKLKDISKIVLVTDGLTPNCQTCGKLIANGDEVYIAEDGLFHS VKSNTIAGSTLTMIQGLKNLIEFGFSLSDAVQASSYNPTRILNIDKKGLICHGYDANLNVLDKDFNLKLTMIESKIIFNN L
Sequences:
>Translated_401_residues MPNFCLFNSKSVLTGNDKIDNSAVLIKDNKIFDIVTSDRLKKMDLEEYQMIDTKGNYITPGLYDNHIHGFHGHGTDQCST ESILKMSEHLAQYGVVGFLPTLYPRPIDEMIKTIKACIAAIGKEKGAKILGLHLEGPFFSPEKKGAHPVSYLHEPSIEVM QKLIDAAGGVFTGSNGKRKTHISTMTVAPELKGMRELAIFCLENNINLQAGHTNATYENMIEGFQVGILHTTHFFNAMSK LDHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLILMLRKLKDISKIVLVTDGLTPNCQTCGKLIANGDEVYIAEDGLFHS VKSNTIAGSTLTMIQGLKNLIEFGFSLSDAVQASSYNPTRILNIDKKGLICHGYDANLNVLDKDFNLKLTMIESKIIFNN L >Mature_400_residues PNFCLFNSKSVLTGNDKIDNSAVLIKDNKIFDIVTSDRLKKMDLEEYQMIDTKGNYITPGLYDNHIHGFHGHGTDQCSTE SILKMSEHLAQYGVVGFLPTLYPRPIDEMIKTIKACIAAIGKEKGAKILGLHLEGPFFSPEKKGAHPVSYLHEPSIEVMQ KLIDAAGGVFTGSNGKRKTHISTMTVAPELKGMRELAIFCLENNINLQAGHTNATYENMIEGFQVGILHTTHFFNAMSKL DHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLILMLRKLKDISKIVLVTDGLTPNCQTCGKLIANGDEVYIAEDGLFHSV KSNTIAGSTLTMIQGLKNLIEFGFSLSDAVQASSYNPTRILNIDKKGLICHGYDANLNVLDKDFNLKLTMIESKIIFNNL
Specific function: N-acetylglucosamine utilization. [C]
COG id: COG1820
COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nagA family [H]
Homologues:
Organism=Homo sapiens, GI21361513, Length=438, Percent_Identity=26.2557077625571, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI224922791, Length=436, Percent_Identity=26.3761467889908, Blast_Score=124, Evalue=1e-28, Organism=Escherichia coli, GI1786892, Length=387, Percent_Identity=29.1989664082687, Blast_Score=155, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17553768, Length=402, Percent_Identity=25.3731343283582, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI19920392, Length=400, Percent_Identity=28.5, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI281361140, Length=410, Percent_Identity=28.2926829268293, Blast_Score=113, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR003764 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.1.25 [H]
Molecular weight: Translated: 44204; Mature: 44072
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFCLFNSKSVLTGNDKIDNSAVLIKDNKIFDIVTSDRLKKMDLEEYQMIDTKGNYITP CCCEEEECCCEEEECCCCCCCCEEEEECCEEEEEECCCHHHHCCCHHHEEEECCCCEECC GLYDNHIHGFHGHGTDQCSTESILKMSEHLAQYGVVGFLPTLYPRPIDEMIKTIKACIAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHH IGKEKGAKILGLHLEGPFFSPEKKGAHPVSYLHEPSIEVMQKLIDAAGGVFTGSNGKRKT HCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCEEECCCCCEEE HISTMTVAPELKGMRELAIFCLENNINLQAGHTNATYENMIEGFQVGILHTTHFFNAMSK EEEEEEECHHHHCHHEEEEEEEECCCEEEECCCCCHHHHHHCHHEEEEEHHHHHHHHHHH LDHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLILMLRKLKDISKIVLVTDGLTPNCQTC HCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHH GKLIANGDEVYIAEDGLFHSVKSNTIAGSTLTMIQGLKNLIEFGFSLSDAVQASSYNPTR HHHHCCCCEEEEECCCCEEHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEE ILNIDKKGLICHGYDANLNVLDKDFNLKLTMIESKIIFNNL EEEECCCCCEEECCCCCCEEEECCCCEEEEEEEEEEHCCCC >Mature Secondary Structure PNFCLFNSKSVLTGNDKIDNSAVLIKDNKIFDIVTSDRLKKMDLEEYQMIDTKGNYITP CCEEEECCCEEEECCCCCCCCEEEEECCEEEEEECCCHHHHCCCHHHEEEECCCCEECC GLYDNHIHGFHGHGTDQCSTESILKMSEHLAQYGVVGFLPTLYPRPIDEMIKTIKACIAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHH IGKEKGAKILGLHLEGPFFSPEKKGAHPVSYLHEPSIEVMQKLIDAAGGVFTGSNGKRKT HCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCEEECCCCCEEE HISTMTVAPELKGMRELAIFCLENNINLQAGHTNATYENMIEGFQVGILHTTHFFNAMSK EEEEEEECHHHHCHHEEEEEEEECCCEEEECCCCCHHHHHHCHHEEEEEHHHHHHHHHHH LDHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLILMLRKLKDISKIVLVTDGLTPNCQTC HCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHH GKLIANGDEVYIAEDGLFHSVKSNTIAGSTLTMIQGLKNLIEFGFSLSDAVQASSYNPTR HHHHCCCCEEEEECCCCEEHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEE ILNIDKKGLICHGYDANLNVLDKDFNLKLTMIESKIIFNNL EEEECCCCCEEECCCCCCEEEECCCCEEEEEEEEEEHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA