Click here to switch to the map view.

The map label for this gene is yidD [C]

Identifier: 15594488

GI number: 15594488

Start: 144307

End: 144597

Strand: Direct

Name: yidD [C]

Synonym: BB0143

Alternate gene names: 15594488

Gene position: 144307-144597 (Clockwise)

Preceding gene: 15594481

Following gene: 15594493

Centisome position: 15.85

GC content: 21.99

Gene sequence:

>291_bases
ATGAACATTTTTAAAATTTTATTTATCTTAAATTATGCTCTTATTTTTCTAATAAAAATTTACCAAAATACTTTATCTAA
AATATTTGGACTACAATGCATATACAAACCTACCTGCTCAAAATATTCAATTGAATGTCTTAAAAAATACAATTTTTTAA
CGGCTTTAATATTAATGACACTAAGAATAATAAGATGTAACGCATTATTCAAAGGGGGAAACGATTTTACTCCTAAATAC
AAACCCATTTTAGAATCCTTAAAAGAATTTAAAAAAAGATTAATCAAATAA

Upstream 100 bases:

>100_bases
AAGCCCCCTTATAATAAAAATCAAAACTTTAAAGTTATAAAACTTAATTAATATTTTCAATTCATTTGATTAATTATTAT
AATATAATACAATTCTAAGT

Downstream 100 bases:

>100_bases
GGTCTTATATTTTTCTGGAACCCACGTCTTTACAATCTCTTTATTCTTTTCAACAAATTCAACCGCATTGCGGTATTCTT
TGCCTGGCTCTTTATCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNIFKILFILNYALIFLIKIYQNTLSKIFGLQCIYKPTCSKYSIECLKKYNFLTALILMTLRIIRCNALFKGGNDFTPKY
KPILESLKEFKKRLIK

Sequences:

>Translated_96_residues
MNIFKILFILNYALIFLIKIYQNTLSKIFGLQCIYKPTCSKYSIECLKKYNFLTALILMTLRIIRCNALFKGGNDFTPKY
KPILESLKEFKKRLIK
>Mature_96_residues
MNIFKILFILNYALIFLIKIYQNTLSKIFGLQCIYKPTCSKYSIECLKKYNFLTALILMTLRIIRCNALFKGGNDFTPKY
KPILESLKEFKKRLIK

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=66, Percent_Identity=37.8787878787879, Blast_Score=65, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y143_BORBU (O51168)

Other databases:

- EMBL:   AE000783
- PIR:   G70117
- RefSeq:   NP_212277.1
- EnsemblBacteria:   EBBORT00000008835
- GeneID:   1194978
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0143
- NMPDR:   fig|224326.1.peg.527
- TIGR:   BB_0143
- GeneTree:   EBGT00050000007348
- HOGENOM:   HBG634291
- OMA:   SKYSIEC
- ProtClustDB:   PRK14385
- BioCyc:   BBUR224326:BB_0143-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 11367; Mature: 11367

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFKILFILNYALIFLIKIYQNTLSKIFGLQCIYKPTCSKYSIECLKKYNFLTALILMT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LRIIRCNALFKGGNDFTPKYKPILESLKEFKKRLIK
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIFKILFILNYALIFLIKIYQNTLSKIFGLQCIYKPTCSKYSIECLKKYNFLTALILMT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LRIIRCNALFKGGNDFTPKYKPILESLKEFKKRLIK
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685