Click here to switch to the map view.

The map label for this gene is 15594375

Identifier: 15594375

GI number: 15594375

Start: 27434

End: 27865

Strand: Reverse

Name: 15594375

Synonym: BB0029

Alternate gene names: NA

Gene position: 27865-27434 (Counterclockwise)

Preceding gene: 15594376

Following gene: 15594372

Centisome position: 3.06

GC content: 21.76

Gene sequence:

>432_bases
TTGTTAAGTAAAATTTTTGTTGATGCTGATTCTTGTAATTTTAAGATAATAAAATTTTTACAAAAATTTATATTGCACAA
TAAATCAAAACTCATTGTAGTTTCTAATAAGTTTTTCAGTCTGGAAATAACAGAAAATGTTGCTTTGGAAGTGGTAGACA
ATGTTGATTCATTTATTTTGAATTTAGCAGATAGATATAGCCTTGTGATTACTCGAGATATTTTTTTTGCCAAGCTTCTT
TTAGATCTTGGGGTTAAGGTTATGAATGATGAAGGTCGAATTTTTGATATAAATAATATAAATTATTTATATTTTAGATC
TAAGATTAATTTCAATTTGAAAATTAAGATTAAAAAATATTATGATGAAGATTTTAATAAATCTAGATATGAAAAATTTA
TAACGAATTTTTATTCTTTATTCTTTAGTTAA

Upstream 100 bases:

>100_bases
AATGACAATTTAAGCGTTTTAAATGATTCTAGAATATTTGGACCCATTAATAAAAATGCTATTGTTTCTTTTTTGGTTCT
TAAGGTAGTGGACTATAAGA

Downstream 100 bases:

>100_bases
TTTTCTGTTTTCCAATTTCCACAAACCCTTGCCCTGAGTTAATATGTAAATCGTGTTGTTTGATACAGGAATAATATCAT
TAAGGCCTGTTTTGCTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MLSKIFVDADSCNFKIIKFLQKFILHNKSKLIVVSNKFFSLEITENVALEVVDNVDSFILNLADRYSLVITRDIFFAKLL
LDLGVKVMNDEGRIFDINNINYLYFRSKINFNLKIKIKKYYDEDFNKSRYEKFITNFYSLFFS

Sequences:

>Translated_143_residues
MLSKIFVDADSCNFKIIKFLQKFILHNKSKLIVVSNKFFSLEITENVALEVVDNVDSFILNLADRYSLVITRDIFFAKLL
LDLGVKVMNDEGRIFDINNINYLYFRSKINFNLKIKIKKYYDEDFNKSRYEKFITNFYSLFFS
>Mature_143_residues
MLSKIFVDADSCNFKIIKFLQKFILHNKSKLIVVSNKFFSLEITENVALEVVDNVDSFILNLADRYSLVITRDIFFAKLL
LDLGVKVMNDEGRIFDINNINYLYFRSKINFNLKIKIKKYYDEDFNKSRYEKFITNFYSLFFS

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y029_BORBU (O51060)

Other databases:

- EMBL:   AE000783
- PIR:   E70103
- RefSeq:   NP_212163.1
- EnsemblBacteria:   EBBORT00000008865
- GeneID:   1194865
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0029
- NMPDR:   fig|224326.1.peg.413
- TIGR:   BB_0029
- GeneTree:   EBGT00050000007372
- HOGENOM:   HBG352881
- OMA:   LNKIFVD
- ProtClustDB:   CLSK507304
- BioCyc:   BBUR224326:BB_0029-MONOMER
- HAMAP:   MF_00489
- InterPro:   IPR003791

Pfam domain/function: PF02639 DUF188

EC number: NA

Molecular weight: Translated: 17035; Mature: 17035

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKIFVDADSCNFKIIKFLQKFILHNKSKLIVVSNKFFSLEITENVALEVVDNVDSFIL
CCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCEEEEEHHHHHHHHH
NLADRYSLVITRDIFFAKLLLDLGVKVMNDEGRIFDINNINYLYFRSKINFNLKIKIKKY
HHHCCEEEEEEHHHHHHHHHHHCCEEEECCCCCEEEECCCEEEEEEEEECEEEEEEEEEE
YDEDFNKSRYEKFITNFYSLFFS
CCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSKIFVDADSCNFKIIKFLQKFILHNKSKLIVVSNKFFSLEITENVALEVVDNVDSFIL
CCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCEEEEEHHHHHHHHH
NLADRYSLVITRDIFFAKLLLDLGVKVMNDEGRIFDINNINYLYFRSKINFNLKIKIKKY
HHHCCEEEEEEHHHHHHHHHHHCCEEEECCCCCEEEECCCEEEEEEEEECEEEEEEEEEE
YDEDFNKSRYEKFITNFYSLFFS
CCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685