Click here to switch to the map view.

The map label for this gene is yvcK

Identifier: 50812297

GI number: 50812297

Start: 3570546

End: 3571499

Strand: Reverse

Name: yvcK

Synonym: BSU34760

Alternate gene names: 50812297

Gene position: 3571499-3570546 (Counterclockwise)

Preceding gene: 16080530

Following gene: 16080528

Centisome position: 84.72

GC content: 46.75

Gene sequence:

>954_bases
ATGGGACAAAAGCCGAAAATCGCAATCTTTGGCGGCGGTACAGGTCTTTCTGTATTGCTTCGGGGCCTAAAGCATAAACC
CGTTGACATCACGGCCATTGTAACAGTTGCCGATGATGGGGGGAGCTCTGGCCGTCTGCGGAATGAACTGAAAATTCCGC
CTCCCGGAGACATCAGAAATGTGCTTGCCGCTTTATCCGATGTGGAGCCGCTTGTTGAAGATCTTTTTCAGCACCGCTTC
AATAAAGGGAATGACTTAACAGGCCATTCTCTCGGGAATTTGATTTTGGCAGCGATGACAAATATAACCGGTGATTTTTT
TCACGCTGTCACAGAAATGAGCAAGGTGCTGAATGTAAGAGGAAAGGTTTTGCCGGCTGCCAATGCCAGTGTCGTTTTGC
ATGCTGAGATGGAAGATGGCCGCGTGGTCTCAGGCGAGTCAACGATCCCAGAATACGGACAGCGCATTAAGCGTGTTTTT
CTCACGCCTGAACAGATTGATCCGCTGCCGGAAACAATAGACGTAATCAGGGAAGCGGATTTGATTATTATCGGCCCGGG
AAGCCTCTATACCAGCATTCTTCCCAATTTGCTCGTCCCAAAAATCGGGGAAGAAGTGATAAAGGCGCCGGCGAAAAAAG
TATACATTTGCAACGTGATGACTCAGCCCGGCGAAACGCTCCATTACACCGCTGCTGATCATGTGAAAGCGCTCAATCAG
CATATGGGCTGTGGTTTTATTGATACGATATTAGTGAACAGTGAAGACATTCCCGACGAAATAAAACGTAAGTACGAAAT
GGAATCGGCGCGTCCTGTTGATTTTGATATCGAAGAGCTGAAAGCGATGGGGCTTGAAGTCATCAGAGATCAAATTGTAA
CGTATAAAAATGACGTAATACGTCACGATACACATAAAGTGGCCTCTCTTCTTGTTGATTTACTGAAAGAATGA

Upstream 100 bases:

>100_bases
CGCTCTGTGACATTAGCCGAGAATTTAGCTGATTATTTCAAAAAGGATTACTATACTCATGTTACTCACCGGGACATTGA
AAAGAGAAGCCGGAAATAAG

Downstream 100 bases:

>100_bases
AGCCTTGAAATGAGGTGGCTATATGTCATTTGCATCAGAAACAAAAAAAGAATTAACGAATCTGGAAGTGAAGGACTGCT
GCATTAATGCCGAGCTGTCT

Product: gluconeogenesis factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MGQKPKIAIFGGGTGLSVLLRGLKHKPVDITAIVTVADDGGSSGRLRNELKIPPPGDIRNVLAALSDVEPLVEDLFQHRF
NKGNDLTGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVRGKVLPAANASVVLHAEMEDGRVVSGESTIPEYGQRIKRVF
LTPEQIDPLPETIDVIREADLIIIGPGSLYTSILPNLLVPKIGEEVIKAPAKKVYICNVMTQPGETLHYTAADHVKALNQ
HMGCGFIDTILVNSEDIPDEIKRKYEMESARPVDFDIEELKAMGLEVIRDQIVTYKNDVIRHDTHKVASLLVDLLKE

Sequences:

>Translated_317_residues
MGQKPKIAIFGGGTGLSVLLRGLKHKPVDITAIVTVADDGGSSGRLRNELKIPPPGDIRNVLAALSDVEPLVEDLFQHRF
NKGNDLTGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVRGKVLPAANASVVLHAEMEDGRVVSGESTIPEYGQRIKRVF
LTPEQIDPLPETIDVIREADLIIIGPGSLYTSILPNLLVPKIGEEVIKAPAKKVYICNVMTQPGETLHYTAADHVKALNQ
HMGCGFIDTILVNSEDIPDEIKRKYEMESARPVDFDIEELKAMGLEVIRDQIVTYKNDVIRHDTHKVASLLVDLLKE
>Mature_316_residues
GQKPKIAIFGGGTGLSVLLRGLKHKPVDITAIVTVADDGGSSGRLRNELKIPPPGDIRNVLAALSDVEPLVEDLFQHRFN
KGNDLTGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVRGKVLPAANASVVLHAEMEDGRVVSGESTIPEYGQRIKRVFL
TPEQIDPLPETIDVIREADLIIIGPGSLYTSILPNLLVPKIGEEVIKAPAKKVYICNVMTQPGETLHYTAADHVKALNQH
MGCGFIDTILVNSEDIPDEIKRKYEMESARPVDFDIEELKAMGLEVIRDQIVTYKNDVIRHDTHKVASLLVDLLKE

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family

Homologues:

Organism=Escherichia coli, GI1786997, Length=252, Percent_Identity=34.5238095238095, Blast_Score=128, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVCK_BACSU (O06974)

Other databases:

- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   A70032
- RefSeq:   NP_391356.2
- ProteinModelPortal:   O06974
- SMR:   O06974
- EnsemblBacteria:   EBBACT00000001013
- GeneID:   936527
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34760
- NMPDR:   fig|224308.1.peg.3482
- GenoList:   BSU34760
- GeneTree:   EBGT00050000002816
- HOGENOM:   HBG321904
- OMA:   AKKVYIC
- PhylomeDB:   O06974
- ProtClustDB:   CLSK2391403
- BioCyc:   BSUB:BSU34760-MONOMER
- InterPro:   IPR002882
- InterPro:   IPR010119
- TIGRFAMs:   TIGR01826

Pfam domain/function: PF01933 UPF0052

EC number: NA

Molecular weight: Translated: 34688; Mature: 34556

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQKPKIAIFGGGTGLSVLLRGLKHKPVDITAIVTVADDGGSSGRLRNELKIPPPGDIRN
CCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHH
VLAALSDVEPLVEDLFQHRFNKGNDLTGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVR
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
GKVLPAANASVVLHAEMEDGRVVSGESTIPEYGQRIKRVFLTPEQIDPLPETIDVIREAD
CCEEECCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCC
LIIIGPGSLYTSILPNLLVPKIGEEVIKAPAKKVYICNVMTQPGETLHYTAADHVKALNQ
EEEECCCHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCCCEEEECHHHHHHHHHH
HMGCGFIDTILVNSEDIPDEIKRKYEMESARPVDFDIEELKAMGLEVIRDQIVTYKNDVI
HCCCCHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RHDTHKVASLLVDLLKE
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GQKPKIAIFGGGTGLSVLLRGLKHKPVDITAIVTVADDGGSSGRLRNELKIPPPGDIRN
CCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHH
VLAALSDVEPLVEDLFQHRFNKGNDLTGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVR
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
GKVLPAANASVVLHAEMEDGRVVSGESTIPEYGQRIKRVFLTPEQIDPLPETIDVIREAD
CCEEECCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCC
LIIIGPGSLYTSILPNLLVPKIGEEVIKAPAKKVYICNVMTQPGETLHYTAADHVKALNQ
EEEECCCHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCCCEEEECHHHHHHHHHH
HMGCGFIDTILVNSEDIPDEIKRKYEMESARPVDFDIEELKAMGLEVIRDQIVTYKNDVI
HCCCCHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RHDTHKVASLLVDLLKE
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377