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The map label for this gene is whiA

Identifier: 16080528

GI number: 16080528

Start: 3569573

End: 3570523

Strand: Reverse

Name: whiA

Synonym: BSU34750

Alternate gene names: 16080528

Gene position: 3570523-3569573 (Counterclockwise)

Preceding gene: 50812297

Following gene: 16080527

Centisome position: 84.7

GC content: 42.27

Gene sequence:

>951_bases
ATGTCATTTGCATCAGAAACAAAAAAAGAATTAACGAATCTGGAAGTGAAGGACTGCTGCATTAATGCCGAGCTGTCTGC
ACTCATTCGGATGAATGGAGCTTTATCATTTACAAACCGCCATCTCGTACTCGATGTTCAAACCGAAAACGCGGCGATTG
CCCGCCGCATCTATACATTGCTGAAAAAACAATATGATGTGTCGGTCGAGCTGCTGGTCAGAAAGAAAATGCGGCTGAAA
AAGAATAACGTCTATATTGTGCGTTTTTCAGAAAATGCAAAAGCGATCTTAGAGGATTTAAAAATACTCGGGGAGAATTT
TGTGTTTGAACGAAGTATTTCGAAAGAGCTGGTCAAAAAGAGATGCTGCAAGCGTTCTTATATGAGAGGAGCATTTTTGG
CAGGAGGTTCGGTCAATAACCCGGAAACCTCCTCGTATCATTTAGAAATCTTCTCTCTTTATAAGGAGCATAACGATTCA
TTATGTGACCTGTTAAATGAGTTTCAGTTAAACAGCAAAACGCTTGAACGGAAAAAAGGCTATATTACCTATTTAAAAGA
GGCTGAAAAGATTACAGAGTTTCTGAACGTAATTGGCGCTCACAATTCGCTTCTGCGATTTGAGGATGTCAGAATCGTTC
GGGACATGAGAAATTCGGTCAACCGCCTCGTCAATTGTGAAACAGCCAACTTAAACAAAACGATCGGCGCATCGCTGAGA
CAGGTGGAAAATATTAAATACATCGATGAAAGAATCGGCCTGGAGGCGCTGCCTGAAAAACTTCGGGAAATTGCGCAGCT
GCGGATTGATTATCAGGAAGTGACGCTGAAAGAGCTAGGGGAAATGGTAGCAAGCGGGAAAATCAGCAAATCAGGGATCA
ATCACAGGCTGAGAAAACTTGACGAAATCGCAGAACAGCTGCGGACAGGGCAAACCGTCACTTTAAAATAA

Upstream 100 bases:

>100_bases
GTAACGTATAAAAATGACGTAATACGTCACGATACACATAAAGTGGCCTCTCTTCTTGTTGATTTACTGAAAGAATGAAG
CCTTGAAATGAGGTGGCTAT

Downstream 100 bases:

>100_bases
CCGTAAAGAAAAGGGGAGATCTTATGGTTCAACAGAAAGTGGAAGTTCGATTAAAGACAGGACTGCAAGCACGTCCTGCT
GCTTTGTTTGTACAAGAAGC

Product: morphogen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSFASETKKELTNLEVKDCCINAELSALIRMNGALSFTNRHLVLDVQTENAAIARRIYTLLKKQYDVSVELLVRKKMRLK
KNNVYIVRFSENAKAILEDLKILGENFVFERSISKELVKKRCCKRSYMRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDS
LCDLLNEFQLNSKTLERKKGYITYLKEAEKITEFLNVIGAHNSLLRFEDVRIVRDMRNSVNRLVNCETANLNKTIGASLR
QVENIKYIDERIGLEALPEKLREIAQLRIDYQEVTLKELGEMVASGKISKSGINHRLRKLDEIAEQLRTGQTVTLK

Sequences:

>Translated_316_residues
MSFASETKKELTNLEVKDCCINAELSALIRMNGALSFTNRHLVLDVQTENAAIARRIYTLLKKQYDVSVELLVRKKMRLK
KNNVYIVRFSENAKAILEDLKILGENFVFERSISKELVKKRCCKRSYMRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDS
LCDLLNEFQLNSKTLERKKGYITYLKEAEKITEFLNVIGAHNSLLRFEDVRIVRDMRNSVNRLVNCETANLNKTIGASLR
QVENIKYIDERIGLEALPEKLREIAQLRIDYQEVTLKELGEMVASGKISKSGINHRLRKLDEIAEQLRTGQTVTLK
>Mature_315_residues
SFASETKKELTNLEVKDCCINAELSALIRMNGALSFTNRHLVLDVQTENAAIARRIYTLLKKQYDVSVELLVRKKMRLKK
NNVYIVRFSENAKAILEDLKILGENFVFERSISKELVKKRCCKRSYMRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDSL
CDLLNEFQLNSKTLERKKGYITYLKEAEKITEFLNVIGAHNSLLRFEDVRIVRDMRNSVNRLVNCETANLNKTIGASLRQ
VENIKYIDERIGLEALPEKLREIAQLRIDYQEVTLKELGEMVASGKISKSGINHRLRKLDEIAEQLRTGQTVTLK

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 36341; Mature: 36209

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFASETKKELTNLEVKDCCINAELSALIRMNGALSFTNRHLVLDVQTENAAIARRIYTL
CCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCEEECCCEEEEEEECCCHHHHHHHHHH
LKKQYDVSVELLVRKKMRLKKNNVYIVRFSENAKAILEDLKILGENFVFERSISKELVKK
HHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RCCKRSYMRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDSLCDLLNEFQLNSKTLERKKG
HHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCC
YITYLKEAEKITEFLNVIGAHNSLLRFEDVRIVRDMRNSVNRLVNCETANLNKTIGASLR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QVENIKYIDERIGLEALPEKLREIAQLRIDYQEVTLKELGEMVASGKISKSGINHRLRKL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DEIAEQLRTGQTVTLK
HHHHHHHHCCCEEEEC
>Mature Secondary Structure 
SFASETKKELTNLEVKDCCINAELSALIRMNGALSFTNRHLVLDVQTENAAIARRIYTL
CCHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCEEECCCEEEEEEECCCHHHHHHHHHH
LKKQYDVSVELLVRKKMRLKKNNVYIVRFSENAKAILEDLKILGENFVFERSISKELVKK
HHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RCCKRSYMRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDSLCDLLNEFQLNSKTLERKKG
HHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCC
YITYLKEAEKITEFLNVIGAHNSLLRFEDVRIVRDMRNSVNRLVNCETANLNKTIGASLR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QVENIKYIDERIGLEALPEKLREIAQLRIDYQEVTLKELGEMVASGKISKSGINHRLRKL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DEIAEQLRTGQTVTLK
HHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA