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The map label for this gene is ywqB

Identifier: 255767781

GI number: 255767781

Start: 3733852

End: 3735462

Strand: Direct

Name: ywqB

Synonym: BSU36270

Alternate gene names: 255767781

Gene position: 3733852-3735462 (Clockwise)

Preceding gene: 16080669

Following gene: 16080681

Centisome position: 88.57

GC content: 45.81

Gene sequence:

>1611_bases
ATGCTTCAGAATATGATTTCCAAAGACGATGTGCTGGCATCTGCTGAACAGTTAAAAGAACTTCTTCCTTACAATGAGGA
AAATGTTCAGCTGATCAAAAAAGCCCTTATTTTATATCGGCAGGATTCAGTCTATCGTTTACAAGCAGTGAGTCCGACGG
AAGTTACGGCTTACGTGCAGGATGTTGTGCCTGTGCGGGTCACATTGAACTTGTTTGTCATAGTCAAAAGCGGCTGTTCA
TGTCCGTCCGGAAGAATCTGCCGCCATATGCTGGCTGTGTTTTTATATGTATATGCAATGTTCGAGCGAGTGGGTACTTT
TACAGAGTATTGGCTGGAGAGGGAAAAGCTTGAGGAAAGCAAAGAGCTCGTCCGCCGCCAGTTTCAGGAAAAGGTGCTGC
CTAATGAAGAATCACTTTCAAGCTGGCTTGCTTTTTTTGATTCAGAGTTTTCTCTCTGGCAGGCACGTACGCCAGAAGGC
AGCCAAAACATGCAGGGCCTCTATTACGGCTACCTGTCCGCATTAAAAAAACATGCGCCGAACAAGCCGGAGCTGAAAAG
CCTGTATCAGATTCATTCCGCGATTGCGGTTTGGCTTCGCATGTTCACATTGATTGAAGCGGGCAAGCTAAACCCCGAAC
AAGATTTTTATTCCCTCAATCCGTACGTTGAACAGCTGATGGATACAATCTACAGCTCTATTGATAAATTAAAAACGTAC
GCGCTGTCTTTTGCGCTTGATCCGTTTTTGGATAAAACACCGGATGTTATCCGGCATTTGCTGTTGAAAGAAGAAATTTT
CCAATATGAACGCATCCGCGTCTTCGGTGAAATTTGGAGTGCGCTGCTGTCGCGGCCAAAATGGGTGGCACGCGAACAGG
AGATATTGAAAAAAGAAGCAGGACGGCGTTTTTCTCCCGAATTGCAATTCGGGCGCCTGCATTTGGAATTCCTGCAAAAA
AATGATGACGTTATTTTTGAGGAAGCGGATCAATTCCCGCCGGAAGCGCTCCCTTATACATTCCAATGGCTGAGTGAAAT
GACTGCCAAGAAGGACTGGAAACGGCTTAAAACATGGTACCAGCAAATTGAACCAATTGCGATGGGTTATACGAAGCTGG
ATAAGCCGTTTAAAGAGATTCGCGATGTGATCGGCGAGCTGTTCCTTCTGTTGAATGCCTATGTGCAGCAAACCAATGAT
CAAGCGCTGTTTGAGCGCTTTGCCGCGGGCTGTCTGCCGTATACGTTCACAGAATACAGCCATCATTTATATGAAAAAAA
ACGCTATGCCGAGTGGATTGAAATTCATAGCCTTGTCGGCTTTTCCATCAATGAAATGGATAAAATGATGCTCAAGGAAA
TTGCAGCGAGCGACCCTGAGGCGCTTATACCGGCTTACCATAGAGAAGTGGCTTTTTTCATTGATCAGAAGAACCGTAGC
TCGTACAAGGAAGCCGCCCGGTATTTGAAAAAATTGCGCACCCTGTACAAAAAAGCGAAAAAGCAGAAGGTGTGGGAGCG
GTATATTCAGCTGCTGAGCTCGCATTACAAGCGCCTGCGTGCGCTTCAAGAAGAACTGCAGAAAGGAAAGTTGATTGATG
GCGAGTCTTAA

Upstream 100 bases:

>100_bases
TTATGTCCTTTTTTAGGAAAAACTTTTTAAGGCCGATGTGTTGCGATATAATAGAGAAATTGGATCTTTTTATTACGTGA
CTCGGTTAGGAGCGATAATC

Downstream 100 bases:

>100_bases
AGAAATTCTCATCCACGTCGAACAAATGGAAGATGGGTCATTTACGCTCTCAGCCTTTGATGAGAATGAGCAGCCTCTTC
CCTACAGCCATATGAAAAAG

Product: replication initiation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MLQNMISKDDVLASAEQLKELLPYNEENVQLIKKALILYRQDSVYRLQAVSPTEVTAYVQDVVPVRVTLNLFVIVKSGCS
CPSGRICRHMLAVFLYVYAMFERVGTFTEYWLEREKLEESKELVRRQFQEKVLPNEESLSSWLAFFDSEFSLWQARTPEG
SQNMQGLYYGYLSALKKHAPNKPELKSLYQIHSAIAVWLRMFTLIEAGKLNPEQDFYSLNPYVEQLMDTIYSSIDKLKTY
ALSFALDPFLDKTPDVIRHLLLKEEIFQYERIRVFGEIWSALLSRPKWVAREQEILKKEAGRRFSPELQFGRLHLEFLQK
NDDVIFEEADQFPPEALPYTFQWLSEMTAKKDWKRLKTWYQQIEPIAMGYTKLDKPFKEIRDVIGELFLLLNAYVQQTND
QALFERFAAGCLPYTFTEYSHHLYEKKRYAEWIEIHSLVGFSINEMDKMMLKEIAASDPEALIPAYHREVAFFIDQKNRS
SYKEAARYLKKLRTLYKKAKKQKVWERYIQLLSSHYKRLRALQEELQKGKLIDGES

Sequences:

>Translated_536_residues
MLQNMISKDDVLASAEQLKELLPYNEENVQLIKKALILYRQDSVYRLQAVSPTEVTAYVQDVVPVRVTLNLFVIVKSGCS
CPSGRICRHMLAVFLYVYAMFERVGTFTEYWLEREKLEESKELVRRQFQEKVLPNEESLSSWLAFFDSEFSLWQARTPEG
SQNMQGLYYGYLSALKKHAPNKPELKSLYQIHSAIAVWLRMFTLIEAGKLNPEQDFYSLNPYVEQLMDTIYSSIDKLKTY
ALSFALDPFLDKTPDVIRHLLLKEEIFQYERIRVFGEIWSALLSRPKWVAREQEILKKEAGRRFSPELQFGRLHLEFLQK
NDDVIFEEADQFPPEALPYTFQWLSEMTAKKDWKRLKTWYQQIEPIAMGYTKLDKPFKEIRDVIGELFLLLNAYVQQTND
QALFERFAAGCLPYTFTEYSHHLYEKKRYAEWIEIHSLVGFSINEMDKMMLKEIAASDPEALIPAYHREVAFFIDQKNRS
SYKEAARYLKKLRTLYKKAKKQKVWERYIQLLSSHYKRLRALQEELQKGKLIDGES
>Mature_536_residues
MLQNMISKDDVLASAEQLKELLPYNEENVQLIKKALILYRQDSVYRLQAVSPTEVTAYVQDVVPVRVTLNLFVIVKSGCS
CPSGRICRHMLAVFLYVYAMFERVGTFTEYWLEREKLEESKELVRRQFQEKVLPNEESLSSWLAFFDSEFSLWQARTPEG
SQNMQGLYYGYLSALKKHAPNKPELKSLYQIHSAIAVWLRMFTLIEAGKLNPEQDFYSLNPYVEQLMDTIYSSIDKLKTY
ALSFALDPFLDKTPDVIRHLLLKEEIFQYERIRVFGEIWSALLSRPKWVAREQEILKKEAGRRFSPELQFGRLHLEFLQK
NDDVIFEEADQFPPEALPYTFQWLSEMTAKKDWKRLKTWYQQIEPIAMGYTKLDKPFKEIRDVIGELFLLLNAYVQQTND
QALFERFAAGCLPYTFTEYSHHLYEKKRYAEWIEIHSLVGFSINEMDKMMLKEIAASDPEALIPAYHREVAFFIDQKNRS
SYKEAARYLKKLRTLYKKAKKQKVWERYIQLLSSHYKRLRALQEELQKGKLIDGES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SWIM-type zinc finger

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWQB_BACSU (P96714)

Other databases:

- EMBL:   Z92952
- EMBL:   AL009126
- PIR:   E70066
- RefSeq:   NP_391508.2
- EnsemblBacteria:   EBBACT00000000797
- GeneID:   936903
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36270
- NMPDR:   fig|224308.1.peg.3634
- GenoList:   BSU36270
- GeneTree:   EBGT00050000002377
- HOGENOM:   HBG338397
- ProtClustDB:   CLSK888015
- BioCyc:   BSUB:BSU36270-MONOMER
- InterPro:   IPR007527

Pfam domain/function: PF04434 SWIM

EC number: NA

Molecular weight: Translated: 63311; Mature: 63311

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQNMISKDDVLASAEQLKELLPYNEENVQLIKKALILYRQDSVYRLQAVSPTEVTAYVQ
CCCCHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
DVVPVRVTLNLFVIVKSGCSCPSGRICRHMLAVFLYVYAMFERVGTFTEYWLEREKLEES
HHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELVRRQFQEKVLPNEESLSSWLAFFDSEFSLWQARTPEGSQNMQGLYYGYLSALKKHAP
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC
NKPELKSLYQIHSAIAVWLRMFTLIEAGKLNPEQDFYSLNPYVEQLMDTIYSSIDKLKTY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
ALSFALDPFLDKTPDVIRHLLLKEEIFQYERIRVFGEIWSALLSRPKWVAREQEILKKEA
HHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GRRFSPELQFGRLHLEFLQKNDDVIFEEADQFPPEALPYTFQWLSEMTAKKDWKRLKTWY
CCCCCCCCHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QQIEPIAMGYTKLDKPFKEIRDVIGELFLLLNAYVQQTNDQALFERFAAGCLPYTFTEYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH
HHLYEKKRYAEWIEIHSLVGFSINEMDKMMLKEIAASDPEALIPAYHREVAFFIDQKNRS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCC
SYKEAARYLKKLRTLYKKAKKQKVWERYIQLLSSHYKRLRALQEELQKGKLIDGES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLQNMISKDDVLASAEQLKELLPYNEENVQLIKKALILYRQDSVYRLQAVSPTEVTAYVQ
CCCCHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
DVVPVRVTLNLFVIVKSGCSCPSGRICRHMLAVFLYVYAMFERVGTFTEYWLEREKLEES
HHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELVRRQFQEKVLPNEESLSSWLAFFDSEFSLWQARTPEGSQNMQGLYYGYLSALKKHAP
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC
NKPELKSLYQIHSAIAVWLRMFTLIEAGKLNPEQDFYSLNPYVEQLMDTIYSSIDKLKTY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
ALSFALDPFLDKTPDVIRHLLLKEEIFQYERIRVFGEIWSALLSRPKWVAREQEILKKEA
HHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GRRFSPELQFGRLHLEFLQKNDDVIFEEADQFPPEALPYTFQWLSEMTAKKDWKRLKTWY
CCCCCCCCHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QQIEPIAMGYTKLDKPFKEIRDVIGELFLLLNAYVQQTNDQALFERFAAGCLPYTFTEYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH
HHLYEKKRYAEWIEIHSLVGFSINEMDKMMLKEIAASDPEALIPAYHREVAFFIDQKNRS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCC
SYKEAARYLKKLRTLYKKAKKQKVWERYIQLLSSHYKRLRALQEELQKGKLIDGES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377