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The map label for this gene is yvrN

Identifier: 255767762

GI number: 255767762

Start: 3412128

End: 3413357

Strand: Reverse

Name: yvrN

Synonym: BSU33260

Alternate gene names: 255767762

Gene position: 3413357-3412128 (Counterclockwise)

Preceding gene: 50812293

Following gene: 255767760

Centisome position: 80.97

GC content: 47.24

Gene sequence:

>1230_bases
ATGCTTGAACATATTCGAATCTCCTTTCAATCCATTTTCTCTCATAAATTAAGATCGATTCTGACAATGCTTGGCGTCAT
TATCGGCATAGCGGCAATCATCGCGATTGTTTCAATGCTGAAGGGCCAAAGTGAGCAGTTAAAGCAAAGTATGATCGGCA
TGGGAAACAACGCCATCAATGTTGTCTACCAGCCGTCTGGCGGAGAAGAGGAGAGCGGCGGCCCTCAGGTGTCGTATGCG
TCCGCGCCGCCTGTAGCGGAAGAAACAGTAAAGGCGATCAAATCAGATCCGATGGTCAAAGGATTATCCTTATATTACTT
GTCAGAAGGCGCGAGCGTTTTTCATTTAACTAACGTTTCGTATCCCCAAGTGTATGGAGTGGACGATGATTACTTCGACA
TGTTTCCAATCCGAATAACCGAAGGGAGAAAGCTGACGGAAAACGATTTAAACAGCACACACCAAGTAGTGATGATCAAT
GAAGCTGTCAGAGATGAACTGTTTCCAGACGGAGAAGCTCTGCATAAAAGCATTGAGATGAATGGTGTGCCGTTTAAGGT
CGTGGGTGTTTTTAAAGAAAAAAATCAACAGGAAAGCATGTTTGAAGGCGACTATGCGAACCCGGTTTTGTACGTGCCGA
AAAAAGTGTGGCCGCTTATTGAAGGATTTGACGCGCCAACGCAGATTGCCGTGCAGGCTGATTCTTCTGAGCATATCCAA
GAAGCGGGTGTAATGGCTGCAGATCTTTTAAATCAGGGACTGTCAGAAGCTGAGCTGGAAAAAGCAGAGTACAGTGTAAT
GGATCTTCAGGAGATCGCGCAGGAAGTGGAGTCCTTTAATCAGTCATTTGCATTGCTGCTTGGCGGTATCGCCAGTATTT
CACTTTTGGTGGGCGGTATCGGCGTCATGAACATTATGCTCGTTTCCGTAACGGAGCGCACGAGGGAAATCGGAATTAAG
AAAGCGCTCGGTGCTAAGCGGCGTGTGATTTTATTTCAATTTTTAACCGAGGCTGTCGTGCTGACAAGCATTGGCGGAAT
ACTCGGTGTGCTGGCGGGCTTCGGCATCGCCAAGCTGCTGACGGTCATTTTTCCGATGCCTTTTATCGTCTCCATTCCAG
CTGTTGTCGGAGCACTCATCTTTTCAATGGCAGTCGGCATTATCTTCGGCTTGCTTCCGTCTATCAAGGCTTCGAAGCTT
CAGCCTGTAGACGCGCTTCGCTATGAATAA

Upstream 100 bases:

>100_bases
ATTATGATAACCCACGACCCGGACGTCGCCAAAAAAGCTGACAGAACCGTTTTTATCAGAGACGGAGAGTTGGTATTAGA
TGAGAGAGGGGATATCAGCC

Downstream 100 bases:

>100_bases
AAAGAACGCATCCAATTGGAATGCGTTCTTTTTTTAGCTGGGAAGAGCCGAGTTGCATTTGTCTAAAATCAAAAAAACGG
CTGCGACAATCATTTCTTCT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MLEHIRISFQSIFSHKLRSILTMLGVIIGIAAIIAIVSMLKGQSEQLKQSMIGMGNNAINVVYQPSGGEEESGGPQVSYA
SAPPVAEETVKAIKSDPMVKGLSLYYLSEGASVFHLTNVSYPQVYGVDDDYFDMFPIRITEGRKLTENDLNSTHQVVMIN
EAVRDELFPDGEALHKSIEMNGVPFKVVGVFKEKNQQESMFEGDYANPVLYVPKKVWPLIEGFDAPTQIAVQADSSEHIQ
EAGVMAADLLNQGLSEAELEKAEYSVMDLQEIAQEVESFNQSFALLLGGIASISLLVGGIGVMNIMLVSVTERTREIGIK
KALGAKRRVILFQFLTEAVVLTSIGGILGVLAGFGIAKLLTVIFPMPFIVSIPAVVGALIFSMAVGIIFGLLPSIKASKL
QPVDALRYE

Sequences:

>Translated_409_residues
MLEHIRISFQSIFSHKLRSILTMLGVIIGIAAIIAIVSMLKGQSEQLKQSMIGMGNNAINVVYQPSGGEEESGGPQVSYA
SAPPVAEETVKAIKSDPMVKGLSLYYLSEGASVFHLTNVSYPQVYGVDDDYFDMFPIRITEGRKLTENDLNSTHQVVMIN
EAVRDELFPDGEALHKSIEMNGVPFKVVGVFKEKNQQESMFEGDYANPVLYVPKKVWPLIEGFDAPTQIAVQADSSEHIQ
EAGVMAADLLNQGLSEAELEKAEYSVMDLQEIAQEVESFNQSFALLLGGIASISLLVGGIGVMNIMLVSVTERTREIGIK
KALGAKRRVILFQFLTEAVVLTSIGGILGVLAGFGIAKLLTVIFPMPFIVSIPAVVGALIFSMAVGIIFGLLPSIKASKL
QPVDALRYE
>Mature_409_residues
MLEHIRISFQSIFSHKLRSILTMLGVIIGIAAIIAIVSMLKGQSEQLKQSMIGMGNNAINVVYQPSGGEEESGGPQVSYA
SAPPVAEETVKAIKSDPMVKGLSLYYLSEGASVFHLTNVSYPQVYGVDDDYFDMFPIRITEGRKLTENDLNSTHQVVMIN
EAVRDELFPDGEALHKSIEMNGVPFKVVGVFKEKNQQESMFEGDYANPVLYVPKKVWPLIEGFDAPTQIAVQADSSEHIQ
EAGVMAADLLNQGLSEAELEKAEYSVMDLQEIAQEVESFNQSFALLLGGIASISLLVGGIGVMNIMLVSVTERTREIGIK
KALGAKRRVILFQFLTEAVVLTSIGGILGVLAGFGIAKLLTVIFPMPFIVSIPAVVGALIFSMAVGIIFGLLPSIKASKL
QPVDALRYE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family

Homologues:

Organism=Escherichia coli, GI1787105, Length=419, Percent_Identity=32.4582338902148, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVRN_BACSU (P46324)

Other databases:

- EMBL:   AJ223978
- EMBL:   AL009126
- EMBL:   M22903
- PIR:   H70047
- RefSeq:   NP_391207.3
- ProteinModelPortal:   P46324
- EnsemblBacteria:   EBBACT00000003443
- GeneID:   937213
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33260
- GenoList:   BSU33260
- GeneTree:   EBGT00050000000612
- HOGENOM:   HBG693448
- ProtClustDB:   CLSK230950
- BioCyc:   BSUB:BSU33260-MONOMER
- GO:   GO:0006810
- InterPro:   IPR003838

Pfam domain/function: PF02687 FtsX

EC number: NA

Molecular weight: Translated: 44344; Mature: 44344

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11c0d688)-; HASH(0x11fdee3c)-; HASH(0x126e97b4)-; HASH(0x12680eb8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEHIRISFQSIFSHKLRSILTMLGVIIGIAAIIAIVSMLKGQSEQLKQSMIGMGNNAIN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEE
VVYQPSGGEEESGGPQVSYASAPPVAEETVKAIKSDPMVKGLSLYYLSEGASVFHLTNVS
EEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCC
YPQVYGVDDDYFDMFPIRITEGRKLTENDLNSTHQVVMINEAVRDELFPDGEALHKSIEM
CCEEECCCCCCCCEEEEEEECCCCCCHHHCCCCCEEEEECHHHHHHCCCCHHHHHHHHHC
NGVPFKVVGVFKEKNQQESMFEGDYANPVLYVPKKVWPLIEGFDAPTQIAVQADSSEHIQ
CCCCEEEEEEHHHCCCHHHHHCCCCCCCEEECCHHHHHHHHCCCCCCEEEEECCCHHHHH
EAGVMAADLLNQGLSEAELEKAEYSVMDLQEIAQEVESFNQSFALLLGGIASISLLVGGI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVMNIMLVSVTERTREIGIKKALGAKRRVILFQFLTEAVVLTSIGGILGVLAGFGIAKLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIFPMPFIVSIPAVVGALIFSMAVGIIFGLLPSIKASKLQPVDALRYE
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCH
>Mature Secondary Structure
MLEHIRISFQSIFSHKLRSILTMLGVIIGIAAIIAIVSMLKGQSEQLKQSMIGMGNNAIN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEE
VVYQPSGGEEESGGPQVSYASAPPVAEETVKAIKSDPMVKGLSLYYLSEGASVFHLTNVS
EEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCC
YPQVYGVDDDYFDMFPIRITEGRKLTENDLNSTHQVVMINEAVRDELFPDGEALHKSIEM
CCEEECCCCCCCCEEEEEEECCCCCCHHHCCCCCEEEEECHHHHHHCCCCHHHHHHHHHC
NGVPFKVVGVFKEKNQQESMFEGDYANPVLYVPKKVWPLIEGFDAPTQIAVQADSSEHIQ
CCCCEEEEEEHHHCCCHHHHHCCCCCCCEEECCHHHHHHHHCCCCCCEEEEECCCHHHHH
EAGVMAADLLNQGLSEAELEKAEYSVMDLQEIAQEVESFNQSFALLLGGIASISLLVGGI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVMNIMLVSVTERTREIGIKKALGAKRRVILFQFLTEAVVLTSIGGILGVLAGFGIAKLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIFPMPFIVSIPAVVGALIFSMAVGIIFGLLPSIKASKLQPVDALRYE
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751; 3145906