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The map label for this gene is xsa

Identifier: 255767658

GI number: 255767658

Start: 2913661

End: 2915148

Strand: Reverse

Name: xsa

Synonym: BSU28510

Alternate gene names: 255767658

Gene position: 2915148-2913661 (Counterclockwise)

Preceding gene: 16079904

Following gene: 16079902

Centisome position: 69.15

GC content: 47.18

Gene sequence:

>1488_bases
ATGTCTGAACATCAAGCAGTGATTCAAACAGATATCGCAAAAGGAACCATTAACAAAAATATATACGGTCATTTTGCTGA
GCATTTAGGAAGAGGGATTTATGAGGGGATCTGGGTCGGAACGGACTCAGACATCCCCAATATCAACGGGATACGAAAGG
ACGTGCTGGAGGCGCTCAAACAGCTGCACATTCCTGTCCTTAGGTGGCCGGGCGGGTGTTTTGCGGACGAATACCATTGG
GCAAACGGTGTCGGTGACCGTAAGACAATGCTGAACACTCACTGGGGCGGTACAATTGAATCAAATGAATTCGGAACGCA
TGAATTTATGATGCTTTGCGAGCTGCTTGAATGCGAGCCATATATTTGCGGCAATGTCGGAAGCGGAACCGTTCAGGAAA
TGTCGGAGTGGATTGAGTATATGACATTTGAAGAAGGCACGCCGATGTCAGACTGGAGAAAGCAAAATGGAAGAGAAGAG
CCTTGGAAGCTGAAATATTTCGGCGTGGGCAATGAAAACTGGGGCTGCGGCGGCAACATGCATCCCGAATACTACGCAGA
TCTGTACCGGCGTTTTCAGACTTATGTCCGCAATTACAGCGGGAATGACATTTATAAAATTGCAGGCGGCGCAAATGTGG
ATGATTTTAATTGGACGGACGTGCTTATGAAAAAAGCCGCTGGCCTGATGGACGGGTTGAGTCTTCATTATTACACGATT
CCGGGGGATTTCTGGAAGGGCAAAGGATCAGCCACAGAATTCACGGAAGATGAATGGTTTATTACGATGAAAAAAGCCAA
ATACATCGATGAATTGATTCAAAAACACGGCACGATTATGGACCGGTACGATCCGGAGCAGCGGGTCGGGCTGATTATTG
ATGAATGGGGCACGTGGTTTGATCCCGAGCCAGGCACGAATCCCGGTTTCTTATATCAGCAAAACACCATTCGTGATGCA
CTGGTGGCGGCTTCTCATTTCCACATTTTCCATCAGCATTGCCGCCGGGTGCAAATGGCCAACATCGCCCAAACAGTAAA
TGTTCTTCAAGCGATGATTTTGACTGAGGGAGAGCGGATGCTTTTGACACCGACGTACCATGTATTCAATATGTTTAAGG
TGCACCAGGACGCTTCTCTTTTAGCCACAGAGACAATGTCTGCCGACTATGAATGGAACGGTGAAACGCTTCCGCAAATC
AGCATTTCAGCGTCGAAACAAGCTGAAGGCGATATCAATATCACAATTTGCAACATCGATCACCAAAACAAAGCAGAGGC
GGAAATCGAGCTGAGGGGCCTACACAAGGCAGCGGACCATTCCGGAGTCATTCTTACGGCAGAAAAAATGAATGCGCATA
ACACGTTTGACGATCCTCATCATGTCAAACCGGAATCCTTCAGACAATACACGCTCAGCAAAAACAAACTGAAAGTAAAA
CTCCCGCCAATGTCAGTCGTCTTACTTACGCTGCGTGCTGATTCTTAA

Upstream 100 bases:

>100_bases
TTAAAAGCGCTTACATTCATGCTGACTCCTCAGGCAAACGACAGATCACATATTTGACTGTGGTGCTTTTCATATCCGTA
TGAAAGGAATGATCAGAGGC

Downstream 100 bases:

>100_bases
TCGCGCAAGAGCGCCGGAGCTTCATGCCGGCGCTCTTTTTCAGGTTTTAAAACAGCTCCGGCAGGGCATGGTAAAGTACA
TGACAGTGAAGAGGAGATGT

Product: alpha-L-arabinofuranosidase

Products: NA

Alternate protein names: Arabinosidase 2

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MSEHQAVIQTDIAKGTINKNIYGHFAEHLGRGIYEGIWVGTDSDIPNINGIRKDVLEALKQLHIPVLRWPGGCFADEYHW
ANGVGDRKTMLNTHWGGTIESNEFGTHEFMMLCELLECEPYICGNVGSGTVQEMSEWIEYMTFEEGTPMSDWRKQNGREE
PWKLKYFGVGNENWGCGGNMHPEYYADLYRRFQTYVRNYSGNDIYKIAGGANVDDFNWTDVLMKKAAGLMDGLSLHYYTI
PGDFWKGKGSATEFTEDEWFITMKKAKYIDELIQKHGTIMDRYDPEQRVGLIIDEWGTWFDPEPGTNPGFLYQQNTIRDA
LVAASHFHIFHQHCRRVQMANIAQTVNVLQAMILTEGERMLLTPTYHVFNMFKVHQDASLLATETMSADYEWNGETLPQI
SISASKQAEGDINITICNIDHQNKAEAEIELRGLHKAADHSGVILTAEKMNAHNTFDDPHHVKPESFRQYTLSKNKLKVK
LPPMSVVLLTLRADS

Sequences:

>Translated_495_residues
MSEHQAVIQTDIAKGTINKNIYGHFAEHLGRGIYEGIWVGTDSDIPNINGIRKDVLEALKQLHIPVLRWPGGCFADEYHW
ANGVGDRKTMLNTHWGGTIESNEFGTHEFMMLCELLECEPYICGNVGSGTVQEMSEWIEYMTFEEGTPMSDWRKQNGREE
PWKLKYFGVGNENWGCGGNMHPEYYADLYRRFQTYVRNYSGNDIYKIAGGANVDDFNWTDVLMKKAAGLMDGLSLHYYTI
PGDFWKGKGSATEFTEDEWFITMKKAKYIDELIQKHGTIMDRYDPEQRVGLIIDEWGTWFDPEPGTNPGFLYQQNTIRDA
LVAASHFHIFHQHCRRVQMANIAQTVNVLQAMILTEGERMLLTPTYHVFNMFKVHQDASLLATETMSADYEWNGETLPQI
SISASKQAEGDINITICNIDHQNKAEAEIELRGLHKAADHSGVILTAEKMNAHNTFDDPHHVKPESFRQYTLSKNKLKVK
LPPMSVVLLTLRADS
>Mature_494_residues
SEHQAVIQTDIAKGTINKNIYGHFAEHLGRGIYEGIWVGTDSDIPNINGIRKDVLEALKQLHIPVLRWPGGCFADEYHWA
NGVGDRKTMLNTHWGGTIESNEFGTHEFMMLCELLECEPYICGNVGSGTVQEMSEWIEYMTFEEGTPMSDWRKQNGREEP
WKLKYFGVGNENWGCGGNMHPEYYADLYRRFQTYVRNYSGNDIYKIAGGANVDDFNWTDVLMKKAAGLMDGLSLHYYTIP
GDFWKGKGSATEFTEDEWFITMKKAKYIDELIQKHGTIMDRYDPEQRVGLIIDEWGTWFDPEPGTNPGFLYQQNTIRDAL
VAASHFHIFHQHCRRVQMANIAQTVNVLQAMILTEGERMLLTPTYHVFNMFKVHQDASLLATETMSADYEWNGETLPQIS
ISASKQAEGDINITICNIDHQNKAEAEIELRGLHKAADHSGVILTAEKMNAHNTFDDPHHVKPESFRQYTLSKNKLKVKL
PPMSVVLLTLRADS

Specific function: Unknown

COG id: COG3534

COG function: function code G; Alpha-L-arabinofuranosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 51 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ABF2_BACSU (P94552)

Other databases:

- EMBL:   Z75208
- EMBL:   AL009126
- PIR:   G69734
- RefSeq:   NP_390729.2
- ProteinModelPortal:   P94552
- SMR:   P94552
- EnsemblBacteria:   EBBACT00000003277
- GeneID:   937449
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU28510
- NMPDR:   fig|224308.1.peg.2854
- GenoList:   BSU28510
- GeneTree:   EBGT00050000002580
- HOGENOM:   HBG654651
- ProtClustDB:   CLSK2793876
- BioCyc:   BSUB:BSU28510-MONOMER
- BRENDA:   3.2.1.55
- InterPro:   IPR010720
- InterPro:   IPR017853
- InterPro:   IPR013781
- Gene3D:   G3DSA:3.20.20.80
- SMART:   SM00813

Pfam domain/function: PF06964 Alpha-L-AF_C; SSF51445 Glyco_hydro_cat

EC number: =3.2.1.55

Molecular weight: Translated: 56475; Mature: 56344

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHQAVIQTDIAKGTINKNIYGHFAEHLGRGIYEGIWVGTDSDIPNINGIRKDVLEALK
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCEEECCCCCCCCCCHHHHHHHHHHH
QLHIPVLRWPGGCFADEYHWANGVGDRKTMLNTHWGGTIESNEFGTHEFMMLCELLECEP
HHCCCEEECCCCCCCCCCCCCCCCCCCHHEEECCCCCEECCCCCCHHHHHHHHHHHHCCC
YICGNVGSGTVQEMSEWIEYMTFEEGTPMSDWRKQNGREEPWKLKYFGVGNENWGCGGNM
EEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC
HPEYYADLYRRFQTYVRNYSGNDIYKIAGGANVDDFNWTDVLMKKAAGLMDGLSLHYYTI
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
PGDFWKGKGSATEFTEDEWFITMKKAKYIDELIQKHGTIMDRYDPEQRVGLIIDEWGTWF
CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCEECCCCCCHHEEEEEECCCCCC
DPEPGTNPGFLYQQNTIRDALVAASHFHIFHQHCRRVQMANIAQTVNVLQAMILTEGERM
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LLTPTYHVFNMFKVHQDASLLATETMSADYEWNGETLPQISISASKQAEGDINITICNID
EECCHHHHHHHHHHCCCCHHEEEHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECC
HQNKAEAEIELRGLHKAADHSGVILTAEKMNAHNTFDDPHHVKPESFRQYTLSKNKLKVK
CCCCCCCEEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEE
LPPMSVVLLTLRADS
ECCCEEEEEEEECCC
>Mature Secondary Structure 
SEHQAVIQTDIAKGTINKNIYGHFAEHLGRGIYEGIWVGTDSDIPNINGIRKDVLEALK
CCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCEEECCCCCCCCCCHHHHHHHHHHH
QLHIPVLRWPGGCFADEYHWANGVGDRKTMLNTHWGGTIESNEFGTHEFMMLCELLECEP
HHCCCEEECCCCCCCCCCCCCCCCCCCHHEEECCCCCEECCCCCCHHHHHHHHHHHHCCC
YICGNVGSGTVQEMSEWIEYMTFEEGTPMSDWRKQNGREEPWKLKYFGVGNENWGCGGNM
EEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC
HPEYYADLYRRFQTYVRNYSGNDIYKIAGGANVDDFNWTDVLMKKAAGLMDGLSLHYYTI
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
PGDFWKGKGSATEFTEDEWFITMKKAKYIDELIQKHGTIMDRYDPEQRVGLIIDEWGTWF
CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCEECCCCCCHHEEEEEECCCCCC
DPEPGTNPGFLYQQNTIRDALVAASHFHIFHQHCRRVQMANIAQTVNVLQAMILTEGERM
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LLTPTYHVFNMFKVHQDASLLATETMSADYEWNGETLPQISISASKQAEGDINITICNID
EECCHHHHHHHHHHCCCCHHEEEHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECC
HQNKAEAEIELRGLHKAADHSGVILTAEKMNAHNTFDDPHHVKPESFRQYTLSKNKLKVK
CCCCCCCEEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEE
LPPMSVVLLTLRADS
ECCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377