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The map label for this gene is ysoA

Identifier: 255767649

GI number: 255767649

Start: 2887817

End: 2888821

Strand: Reverse

Name: ysoA

Synonym: BSU28240

Alternate gene names: 255767649

Gene position: 2888821-2887817 (Counterclockwise)

Preceding gene: 16079877

Following gene: 16079875

Centisome position: 68.53

GC content: 43.18

Gene sequence:

>1005_bases
ATGACGCATGACAAGAAAAACGCAAAAATTATTCCTTTTCCTCATCTGAAAGACCGCCTTGTGGAAAAAGGGATGTCATC
ACTCAAGGAAAAAAAGTATCAAGAAGCGCTTGAACTGTTTTCAGAAGCGATGAAATATGATGATACTGAATCCGATCTTC
ACTTAGGGATGGCCATCTGCTTTTTAGAGCTGGGCGAGCTGGAAGAGGCAGAAAGCGTGTGCGAGAAGATGCTCAAAGAA
GGTTATGGCCATTATTTTACGGTTTTGCAGGTGTACATGACCATCTTAATTCAGCTCAAAAAGTACGAAGAAGTCAAAAG
CACCATTGAAGCCGTTTTGGAAGAAAATCAGCTGCCGGCAGAAAGTGCCGAGCAATTTTATAAGCTGCTGGATTTCAGCC
GGAAAATGACCGATCCGGATCGTGAGGACGAGGCTTGGGCCGAAGAATATGAGGATACAATTGACACCGAGAAAGTGCTG
GCAAGCCCTGAGGAGCAAATGAATCTCATTCATTCCTTAAAAGACCGTAACGTAGCAAAGTATACAGGATTGCTCAAAAC
AATCCTCCAAGACCCCTCAGCCCATCCGATTATCAAAACGATGATTGTCATGCTGTTGGCTGAGCATGAGTACAGTAAAC
CTGTACACATTAGTAAATTTGGCGAGTCGTTGACAATTGAACCGTCAGAGATTGTTCCGCCTGATGCCGCGCCGATTCTT
CACCGTGTTCTCAGGGTGCTAGATGAGACACTTGGAAATGAAAATCCAACCTTATATGCAGCAGTAGAAGAATTGTGGAG
AAGACATTTGTACGTTTTATATCCGTTCCAGCCGAAATTGCTGTCGGCTGACCTTTGGGCGGCTGCCCTTCATAAAGTCG
GTTACGAGATGCACGGGATTGAAATTGAAAGCGAAGAACTTCATATGATGTATGAATTTACAGACAGAGAACTCGATGAA
GCTTGCACAATGTTAAAAGATATTGAAGAAATTTCTTATTTGTAA

Upstream 100 bases:

>100_bases
TCCGGCGGCTTTTTTTGCCTGGTGAAACCTTTCATTTCTTGTTTTTGTTCACAGGTGTTGATACACTTGAACAAAATAAA
TGCCTGAAAGGAATATAGGT

Downstream 100 bases:

>100_bases
ATCGCGCCATATAGTTGAAAGCGCTATGTGTTATGTTATAATATAGTGGTTGTATTTGTGTATAACGGGTTATAAGAAAT
ACGGTTGGACAGGCTTTGCA

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MTHDKKNAKIIPFPHLKDRLVEKGMSSLKEKKYQEALELFSEAMKYDDTESDLHLGMAICFLELGELEEAESVCEKMLKE
GYGHYFTVLQVYMTILIQLKKYEEVKSTIEAVLEENQLPAESAEQFYKLLDFSRKMTDPDREDEAWAEEYEDTIDTEKVL
ASPEEQMNLIHSLKDRNVAKYTGLLKTILQDPSAHPIIKTMIVMLLAEHEYSKPVHISKFGESLTIEPSEIVPPDAAPIL
HRVLRVLDETLGNENPTLYAAVEELWRRHLYVLYPFQPKLLSADLWAAALHKVGYEMHGIEIESEELHMMYEFTDRELDE
ACTMLKDIEEISYL

Sequences:

>Translated_334_residues
MTHDKKNAKIIPFPHLKDRLVEKGMSSLKEKKYQEALELFSEAMKYDDTESDLHLGMAICFLELGELEEAESVCEKMLKE
GYGHYFTVLQVYMTILIQLKKYEEVKSTIEAVLEENQLPAESAEQFYKLLDFSRKMTDPDREDEAWAEEYEDTIDTEKVL
ASPEEQMNLIHSLKDRNVAKYTGLLKTILQDPSAHPIIKTMIVMLLAEHEYSKPVHISKFGESLTIEPSEIVPPDAAPIL
HRVLRVLDETLGNENPTLYAAVEELWRRHLYVLYPFQPKLLSADLWAAALHKVGYEMHGIEIESEELHMMYEFTDRELDE
ACTMLKDIEEISYL
>Mature_333_residues
THDKKNAKIIPFPHLKDRLVEKGMSSLKEKKYQEALELFSEAMKYDDTESDLHLGMAICFLELGELEEAESVCEKMLKEG
YGHYFTVLQVYMTILIQLKKYEEVKSTIEAVLEENQLPAESAEQFYKLLDFSRKMTDPDREDEAWAEEYEDTIDTEKVLA
SPEEQMNLIHSLKDRNVAKYTGLLKTILQDPSAHPIIKTMIVMLLAEHEYSKPVHISKFGESLTIEPSEIVPPDAAPILH
RVLRVLDETLGNENPTLYAAVEELWRRHLYVLYPFQPKLLSADLWAAALHKVGYEMHGIEIESEELHMMYEFTDRELDEA
CTMLKDIEEISYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YSOA_BACSU (P94569)

Other databases:

- EMBL:   Z75208
- EMBL:   AL009126
- PIR:   H69986
- RefSeq:   NP_390702.2
- ProteinModelPortal:   P94569
- SMR:   P94569
- EnsemblBacteria:   EBBACT00000001869
- GeneID:   937479
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU28240
- NMPDR:   fig|224308.1.peg.2827
- GenoList:   BSU28240
- GeneTree:   EBGT00050000001188
- HOGENOM:   HBG338211
- ProtClustDB:   CLSK2391280
- BioCyc:   BSUB:BSU28240-MONOMER
- InterPro:   IPR006822
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: PF04733 Coatomer_E

EC number: NA

Molecular weight: Translated: 38707; Mature: 38576

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS50005 TPR; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDKKNAKIIPFPHLKDRLVEKGMSSLKEKKYQEALELFSEAMKYDDTESDLHLGMAIC
CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FLELGELEEAESVCEKMLKEGYGHYFTVLQVYMTILIQLKKYEEVKSTIEAVLEENQLPA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ESAEQFYKLLDFSRKMTDPDREDEAWAEEYEDTIDTEKVLASPEEQMNLIHSLKDRNVAK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
YTGLLKTILQDPSAHPIIKTMIVMLLAEHEYSKPVHISKFGESLTIEPSEIVPPDAAPIL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCHHCCCCCHHHHH
HRVLRVLDETLGNENPTLYAAVEELWRRHLYVLYPFQPKLLSADLWAAALHKVGYEMHGI
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCHHCCC
EIESEELHMMYEFTDRELDEACTMLKDIEEISYL
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
THDKKNAKIIPFPHLKDRLVEKGMSSLKEKKYQEALELFSEAMKYDDTESDLHLGMAIC
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FLELGELEEAESVCEKMLKEGYGHYFTVLQVYMTILIQLKKYEEVKSTIEAVLEENQLPA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ESAEQFYKLLDFSRKMTDPDREDEAWAEEYEDTIDTEKVLASPEEQMNLIHSLKDRNVAK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
YTGLLKTILQDPSAHPIIKTMIVMLLAEHEYSKPVHISKFGESLTIEPSEIVPPDAAPIL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCHHCCCCCHHHHH
HRVLRVLDETLGNENPTLYAAVEELWRRHLYVLYPFQPKLLSADLWAAALHKVGYEMHGI
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCHHCCC
EIESEELHMMYEFTDRELDEACTMLKDIEEISYL
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377