Click here to switch to the map view.

The map label for this gene is yrvM

Identifier: 255767630

GI number: 255767630

Start: 2813643

End: 2814407

Strand: Reverse

Name: yrvM

Synonym: BSU27540

Alternate gene names: 255767630

Gene position: 2814407-2813643 (Counterclockwise)

Preceding gene: 16079809

Following gene: 255767629

Centisome position: 66.76

GC content: 44.58

Gene sequence:

>765_bases
TTGTTACACCAGTTTTCACGCAATGAATTAGCTATCGGAAAAGAAGGCCTTGAAACGCTGAAAAACAGCACAGTTGCTGT
GCTTGGAGTCGGGGGAGTCGGGTCGTTCGCGGCGGAAGCTCTCGCGCGGTCAGGCGTCGGCCGCATTCTGCTTGTCGACA
AAGATGATGTCGACATTACAAATGTAAATCGTCAGCTTCACGCGCTGCTTTCAACTGTCGGACAGCCGAAAGTTGATTTA
ATGAAGGCGCGGATCGCAGACATTAACCCGGAGTGTGAAGTGATCGCGTTAAAAATGTTCTATACGGAGGAAACGTATGA
GCAGTTTTTTGACTATGGTCTTGACTATGTCATTGATGCGTCAGACACCATTTGTTATAAAATTCATTTAATGAAAGAAT
GTCTAAAACGGGATATTCCGCTCATCTCCAGCATGGGTGCTGCAAATAAAACGGATCCGACACGCTTCCAAATCGCTGAT
ATCTCAAAAACGCACACTGATCCAATTGCGAAGGTCGTTCGTACGAAATTACGCAAGGAGGGTATCAAAAAAGGCGTTCA
AGTGATTTTCTCTGATGAAAGCCCGATTGTTATTCGGGAAGATGTCAGAAAAGAAGTGGGGAATGACGAAGCGAAAATAC
GTAAAGCAAAAATGCCGCCTTCCTCTAATGCTTTTGTGCCGTCAGTTGCAGGTTTGATTATGGGCGGACATGTTGTCATG
GATCTTTTGAAAGACATTGAAATCAAACGTGTGAAGGATAAATAA

Upstream 100 bases:

>100_bases
GGCACTATTGGGACTTTATTTTTTGTGCGCAGAAAAAACGGCTGCTCATGGATCAGCCATTTTATAGATGAAACCAGAAT
ACGAATGTGGAGTGAGGTTC

Downstream 100 bases:

>100_bases
TGCATAAAAACAGCCTTGATGATCAAGGCTGTTTTTTTGTTTTATTTTCTTTTCATTAATTTATCGTACACCTGCTTTAA
GGCAGATTCGAACTTTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLHQFSRNELAIGKEGLETLKNSTVAVLGVGGVGSFAAEALARSGVGRILLVDKDDVDITNVNRQLHALLSTVGQPKVDL
MKARIADINPECEVIALKMFYTEETYEQFFDYGLDYVIDASDTICYKIHLMKECLKRDIPLISSMGAANKTDPTRFQIAD
ISKTHTDPIAKVVRTKLRKEGIKKGVQVIFSDESPIVIREDVRKEVGNDEAKIRKAKMPPSSNAFVPSVAGLIMGGHVVM
DLLKDIEIKRVKDK

Sequences:

>Translated_254_residues
MLHQFSRNELAIGKEGLETLKNSTVAVLGVGGVGSFAAEALARSGVGRILLVDKDDVDITNVNRQLHALLSTVGQPKVDL
MKARIADINPECEVIALKMFYTEETYEQFFDYGLDYVIDASDTICYKIHLMKECLKRDIPLISSMGAANKTDPTRFQIAD
ISKTHTDPIAKVVRTKLRKEGIKKGVQVIFSDESPIVIREDVRKEVGNDEAKIRKAKMPPSSNAFVPSVAGLIMGGHVVM
DLLKDIEIKRVKDK
>Mature_254_residues
MLHQFSRNELAIGKEGLETLKNSTVAVLGVGGVGSFAAEALARSGVGRILLVDKDDVDITNVNRQLHALLSTVGQPKVDL
MKARIADINPECEVIALKMFYTEETYEQFFDYGLDYVIDASDTICYKIHLMKECLKRDIPLISSMGAANKTDPTRFQIAD
ISKTHTDPIAKVVRTKLRKEGIKKGVQVIFSDESPIVIREDVRKEVGNDEAKIRKAKMPPSSNAFVPSVAGLIMGGHVVM
DLLKDIEIKRVKDK

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family

Homologues:

Organism=Escherichia coli, GI1789177, Length=206, Percent_Identity=40.2912621359223, Blast_Score=164, Evalue=4e-42,
Organism=Escherichia coli, GI87082356, Length=143, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787048, Length=134, Percent_Identity=33.5820895522388, Blast_Score=76, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321790, Length=202, Percent_Identity=37.1287128712871, Blast_Score=142, Evalue=7e-35,
Organism=Saccharomyces cerevisiae, GI6322825, Length=200, Percent_Identity=38, Blast_Score=123, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6321903, Length=153, Percent_Identity=28.1045751633987, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24582879, Length=142, Percent_Identity=33.0985915492958, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24660640, Length=131, Percent_Identity=32.0610687022901, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRVM_BACSU (O32037)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_390632.3
- ProteinModelPortal:   O32037
- SMR:   O32037
- EnsemblBacteria:   EBBACT00000000819
- GeneID:   938590
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27540
- GenoList:   BSU27540
- GeneTree:   EBGT00070000032023
- HOGENOM:   HBG321303
- ProtClustDB:   CLSK2765305
- BioCyc:   BSUB:BSU27540-MONOMER
- GO:   GO:0005488
- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594
- Gene3D:   G3DSA:3.40.50.720

Pfam domain/function: PF00899 ThiF; SSF69572 MoeB

EC number: NA

Molecular weight: Translated: 28084; Mature: 28084

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHQFSRNELAIGKEGLETLKNSTVAVLGVGGVGSFAAEALARSGVGRILLVDKDDVDIT
CCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCHH
NVNRQLHALLSTVGQPKVDLMKARIADINPECEVIALKMFYTEETYEQFFDYGLDYVIDA
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHCCCCEEEEC
SDTICYKIHLMKECLKRDIPLISSMGAANKTDPTRFQIADISKTHTDPIAKVVRTKLRKE
CCCEEHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
GIKKGVQVIFSDESPIVIREDVRKEVGNDEAKIRKAKMPPSSNAFVPSVAGLIMGGHVVM
HHHHHHEEEECCCCCEEEHHHHHHHHCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHH
DLLKDIEIKRVKDK
HHHHCCHHHHCCCC
>Mature Secondary Structure
MLHQFSRNELAIGKEGLETLKNSTVAVLGVGGVGSFAAEALARSGVGRILLVDKDDVDIT
CCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCHH
NVNRQLHALLSTVGQPKVDLMKARIADINPECEVIALKMFYTEETYEQFFDYGLDYVIDA
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHCCCCEEEEC
SDTICYKIHLMKECLKRDIPLISSMGAANKTDPTRFQIADISKTHTDPIAKVVRTKLRKE
CCCEEHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
GIKKGVQVIFSDESPIVIREDVRKEVGNDEAKIRKAKMPPSSNAFVPSVAGLIMGGHVVM
HHHHHHEEEECCCCCEEEHHHHHHHHCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHH
DLLKDIEIKRVKDK
HHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377