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The map label for this gene is yrkK

Identifier: 255767612

GI number: 255767612

Start: 2708943

End: 2709419

Strand: Reverse

Name: yrkK

Synonym: BSU26480

Alternate gene names: 255767612

Gene position: 2709419-2708943 (Counterclockwise)

Preceding gene: 16079702

Following gene: 255767611

Centisome position: 64.27

GC content: 30.4

Gene sequence:

>477_bases
GTGGTTTATTTCGTAGCATTTTTTTGTTTTGCTATTACACTTCATAATATTGAGGAAGCTATTTGGTTACCTGAGTGGTC
ACAACAATCTTCAAAGTTTCAAAAGCCAGTAACTTCAAATGAATTTCATTTTGCTGTCATTGTTATAACTATGTTGGCTT
ATTTATCTGCATTTGGTTTTTTATATATGCCAGAATCAGATATTGCAAAATGGATTTTCATTGGCTTTCTAGGTTCTATG
GTTATCAACGCTATTTTTCCACATCTTATCGCAACTGTTGTAATGAAAAAGTATGCACCTGGACTTCTTACGGGCTTATT
GCTTAACATTCCAGTAAACTCATTAGTTATTTATCAAATGTTTTTAAAGAATTTGATTGTATGGAAGGAGTTAATAATAT
CTACGTTGGTTGTAGGAATTATTTTATTAGCACTTATTCCATTATTATTTAAAGTTGGTGATAAAGTATCTCCTTAA

Upstream 100 bases:

>100_bases
GGCAGATTCTTCTCTCTTTTAACACCATATCCAATCAGCCTCAAATGTAATATAATGTTGCCAAACCATATTGGTTGTGG
CACCGAGGAGGAAATGATAG

Downstream 100 bases:

>100_bases
TGAGTTTAAATTGGTAAGGATTGAGGGAAAAGGTAGAAATTTTCTAAATAATGGATTATTCTGTATATCGGATTTCTACA
AAACAATGTCTTAAGTCATC

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MVYFVAFFCFAITLHNIEEAIWLPEWSQQSSKFQKPVTSNEFHFAVIVITMLAYLSAFGFLYMPESDIAKWIFIGFLGSM
VINAIFPHLIATVVMKKYAPGLLTGLLLNIPVNSLVIYQMFLKNLIVWKELIISTLVVGIILLALIPLLFKVGDKVSP

Sequences:

>Translated_158_residues
MVYFVAFFCFAITLHNIEEAIWLPEWSQQSSKFQKPVTSNEFHFAVIVITMLAYLSAFGFLYMPESDIAKWIFIGFLGSM
VINAIFPHLIATVVMKKYAPGLLTGLLLNIPVNSLVIYQMFLKNLIVWKELIISTLVVGIILLALIPLLFKVGDKVSP
>Mature_158_residues
MVYFVAFFCFAITLHNIEEAIWLPEWSQQSSKFQKPVTSNEFHFAVIVITMLAYLSAFGFLYMPESDIAKWIFIGFLGSM
VINAIFPHLIATVVMKKYAPGLLTGLLLNIPVNSLVIYQMFLKNLIVWKELIISTLVVGIILLALIPLLFKVGDKVSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRKK_BACSU (P54438)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   A69977
- RefSeq:   NP_390525.2
- EnsemblBacteria:   EBBACT00000001859
- GeneID:   937659
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26480
- NMPDR:   fig|224308.1.peg.2650
- GenoList:   BSU26480
- HOGENOM:   HBG349005
- ProtClustDB:   CLSK2460942
- BioCyc:   BSUB:BSU26480-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17859; Mature: 17859

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10529578)-; HASH(0x109e6898)-; HASH(0x11243d48)-; HASH(0xfe6c10c)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYFVAFFCFAITLHNIEEAIWLPEWSQQSSKFQKPVTSNEFHFAVIVITMLAYLSAFGF
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
LYMPESDIAKWIFIGFLGSMVINAIFPHLIATVVMKKYAPGLLTGLLLNIPVNSLVIYQM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHH
FLKNLIVWKELIISTLVVGIILLALIPLLFKVGDKVSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure
MVYFVAFFCFAITLHNIEEAIWLPEWSQQSSKFQKPVTSNEFHFAVIVITMLAYLSAFGF
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
LYMPESDIAKWIFIGFLGSMVINAIFPHLIATVVMKKYAPGLLTGLLLNIPVNSLVIYQM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHH
FLKNLIVWKELIISTLVVGIILLALIPLLFKVGDKVSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377