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The map label for this gene is yrkL

Identifier: 255767611

GI number: 255767611

Start: 2708175

End: 2708699

Strand: Reverse

Name: yrkL

Synonym: BSU26470

Alternate gene names: 255767611

Gene position: 2708699-2708175 (Counterclockwise)

Preceding gene: 255767612

Following gene: 16079696

Centisome position: 64.25

GC content: 39.81

Gene sequence:

>525_bases
ATGAAAACATTAGTTATCGTTATACATCCTAATTTGGAAACGTCTGTTGTCAACAAAACCTGGATGAATCGTTTAAAGCA
AGAGAAAGACATTACGGTTCATGACCTGTACGGTGAATACCCTAATTTTATCATTGATGTAGAAAAAGAGCAGCAGCTCC
TGTTAGATCATGAGCGTATCGTTTTTCAGTTCCCAATGTATTGGTACAGCAGTCCCGCGTTACTCAAACAATGGGAAGAT
GATGTGTTAACACATGGCTGGGCTTATGGAACTGGAGGAACTAAATTGCATGGAAAAGAACTACTCTTAGCTATCTCCTT
AGGCGCACAGGAATCTGATTATCAAGCAGGCGGAGAATATAATATCACGATCAGCGAGCTTATCAGACCGTTTCAAGTCA
CTGCTAACTATATAGGAATGCGTTTTCTTCCTGCGTTTACACAATATGGGACACTTCATCTTTCAAAAGAAGATGTTAAG
AACAGTGCGGAGAGATTGGTTGACTATCTTAAAGCCGAGCATTAA

Upstream 100 bases:

>100_bases
GGATAAAATAGGTGTAAATAAAGTTGCTATTTTAAAATTAGAATCAATTCATTATCGTAAAAAATAATAACTAATTGGCA
AAGAAAGGATAATCAGTCTA

Downstream 100 bases:

>100_bases
TCCGGTATTCGCGAGGGAAGCTGAAACAAATGATGTGTTATGAAATAAGGGTTTGTGACAGATTTTCATAAACTTAATTT
CAAAGTTACATCAAATACTT

Product: NAD(P)H oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKTLVIVIHPNLETSVVNKTWMNRLKQEKDITVHDLYGEYPNFIIDVEKEQQLLLDHERIVFQFPMYWYSSPALLKQWED
DVLTHGWAYGTGGTKLHGKELLLAISLGAQESDYQAGGEYNITISELIRPFQVTANYIGMRFLPAFTQYGTLHLSKEDVK
NSAERLVDYLKAEH

Sequences:

>Translated_174_residues
MKTLVIVIHPNLETSVVNKTWMNRLKQEKDITVHDLYGEYPNFIIDVEKEQQLLLDHERIVFQFPMYWYSSPALLKQWED
DVLTHGWAYGTGGTKLHGKELLLAISLGAQESDYQAGGEYNITISELIRPFQVTANYIGMRFLPAFTQYGTLHLSKEDVK
NSAERLVDYLKAEH
>Mature_174_residues
MKTLVIVIHPNLETSVVNKTWMNRLKQEKDITVHDLYGEYPNFIIDVEKEQQLLLDHERIVFQFPMYWYSSPALLKQWED
DVLTHGWAYGTGGTKLHGKELLLAISLGAQESDYQAGGEYNITISELIRPFQVTANYIGMRFLPAFTQYGTLHLSKEDVK
NSAERLVDYLKAEH

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family

Homologues:

Organism=Escherichia coli, GI1789750, Length=169, Percent_Identity=39.6449704142012, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI1786231, Length=175, Percent_Identity=39.4285714285714, Blast_Score=130, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRKL_BACSU (P54439)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   B69977
- RefSeq:   NP_390524.2
- ProteinModelPortal:   P54439
- SMR:   P54439
- EnsemblBacteria:   EBBACT00000004097
- GeneID:   937658
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26470
- NMPDR:   fig|224308.1.peg.2649
- GenoList:   BSU26470
- GeneTree:   EBGT00050000000774
- HOGENOM:   HBG532247
- PhylomeDB:   P54439
- ProtClustDB:   CLSK887625
- BioCyc:   BSUB:BSU26470-MONOMER
- InterPro:   IPR003680

Pfam domain/function: PF02525 Flavodoxin_2

EC number: 1.6.99.- [C]

Molecular weight: Translated: 20119; Mature: 20119

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLVIVIHPNLETSVVNKTWMNRLKQEKDITVHDLYGEYPNFIIDVEKEQQLLLDHERI
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCHHHHHHCCCEE
VFQFPMYWYSSPALLKQWEDDVLTHGWAYGTGGTKLHGKELLLAISLGAQESDYQAGGEY
EEEECHHHHCCHHHHHHHHHHHHHCCEEECCCCCEECCCEEEEEEECCCCCCCCCCCCEE
NITISELIRPFQVTANYIGMRFLPAFTQYGTLHLSKEDVKNSAERLVDYLKAEH
EEEHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTLVIVIHPNLETSVVNKTWMNRLKQEKDITVHDLYGEYPNFIIDVEKEQQLLLDHERI
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCHHHHHHCCCEE
VFQFPMYWYSSPALLKQWEDDVLTHGWAYGTGGTKLHGKELLLAISLGAQESDYQAGGEY
EEEECHHHHCCHHHHHHHHHHHHHCCEEECCCCCEECCCEEEEEEECCCCCCCCCCCCEE
NITISELIRPFQVTANYIGMRFLPAFTQYGTLHLSKEDVKNSAERLVDYLKAEH
EEEHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377