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The map label for this gene is drm

Identifier: 255767508

GI number: 255767508

Start: 2447246

End: 2448430

Strand: Reverse

Name: drm

Synonym: BSU23500

Alternate gene names: 255767508

Gene position: 2448430-2447246 (Counterclockwise)

Preceding gene: 255767509

Following gene: 16079406

Centisome position: 58.08

GC content: 46.5

Gene sequence:

>1185_bases
ATGCCTGCATACAAATATAATCGTGTGTTTTTAATTGTGATGGACTCAGTCGGAATCGGCGAAGCGCCGGATGCCGCTGA
CTTTAATGACGAAGGCGCTCATACGCTCGGTCATATTGCCGAGCATATGAACGGATTACATATGCCGAATATGGCAAAGC
TCGGCCTTGGTCTTATCGAAGATATCAAAGGTGTAGAAAAAACAGAACATCCGCTTGCCTATTATGGAAAAATGCAAGAA
GCGTCAAACGGCAAAGATACGATGACCGGCCATTGGGAGATTATGGGTTTATACATTGATAAACCGTTTAAAGTGTTCCC
GGAAGGCTTTCCTGATGAATTGCTTCAAGAGCTGGAAAAGAGATCTGGCCGCAAAATTATTGGAAACAAGCCGGCTTCCG
GCACAGCGATTTTGGATGAGCTTGGCCAGGAGCACATGGAGACAGGGGCTTTAATTGTTTACACGTCTGCTGACTCTGTT
CTGCAAATTGCCGCTCACGAAGAGGTTGTGCCGCTTGAGGAGCTGTATCGCATTTGCGAAACGGCGAGAGAGCTGACGCT
TGATCCGAAATATATGGTTGGCCGCATTATTGCACGGCCGTTCGTCGGAGAGCCGGGTCAATTCAAACGGACGCCAAACC
GCCATGATTATGCGCTGAAGCCGTTTGACCGCACTGTCATGAATGAATTGAAAGACTGCGGCTTAGATGTGATTTCAATC
GGTAAAATCTCTGATATTTACGACGGAGAAGGCATTACTTCTTCACGCAGAACGGTTTCTAATATGGACGGAATGGACAA
GGTGATCGATACGCTGGGAGAAGATTTTACGGGTCTGAGCTTTGCGAACCTTGTTGATTTTGACGCGTTATTCGGACACC
GCCGTGACCCTGAAGGCTACGGACGCGCGCTTGAAGAATTTGATGCGCGGCTTCCGGAAGTGTTTGAAAAAATGAGAGAA
GACGATCTGTTAATTATTACAGCCGACCACGGCAATGATCCGATTCATCATGGGACTGACCATACACGCGAGTATGTGCC
GATTCTCGCTTACAGCAAAAAACATAAGAAAGCGCAAATGCTGCCGCTTGCAGATACATTTGCCGATATTGGCGCAACGA
TCGCTGATAATTTCCAAACAAATAAACCGAAATACGGGAAAAGCTTTTTATCTTTATTACAATAG

Upstream 100 bases:

>100_bases
TTCCAAATACATTGTCAACGGGAATGAAAACGGTTTATACTTGAGTTGTCAGACCTCTTAGCGATACAATAGACGTATAG
AAAAAAAGGAGGCTTTCAAG

Downstream 100 bases:

>100_bases
GGGGACTGTTTCTTGAAGGACAGAATTGAACGCGCAGCCGCTTTTATTAAACAAAACCTGCCGGAATCTCCAAAGATCGG
CCTTATTTTAGGCTCAGGTC

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MPAYKYNRVFLIVMDSVGIGEAPDAADFNDEGAHTLGHIAEHMNGLHMPNMAKLGLGLIEDIKGVEKTEHPLAYYGKMQE
ASNGKDTMTGHWEIMGLYIDKPFKVFPEGFPDELLQELEKRSGRKIIGNKPASGTAILDELGQEHMETGALIVYTSADSV
LQIAAHEEVVPLEELYRICETARELTLDPKYMVGRIIARPFVGEPGQFKRTPNRHDYALKPFDRTVMNELKDCGLDVISI
GKISDIYDGEGITSSRRTVSNMDGMDKVIDTLGEDFTGLSFANLVDFDALFGHRRDPEGYGRALEEFDARLPEVFEKMRE
DDLLIITADHGNDPIHHGTDHTREYVPILAYSKKHKKAQMLPLADTFADIGATIADNFQTNKPKYGKSFLSLLQ

Sequences:

>Translated_394_residues
MPAYKYNRVFLIVMDSVGIGEAPDAADFNDEGAHTLGHIAEHMNGLHMPNMAKLGLGLIEDIKGVEKTEHPLAYYGKMQE
ASNGKDTMTGHWEIMGLYIDKPFKVFPEGFPDELLQELEKRSGRKIIGNKPASGTAILDELGQEHMETGALIVYTSADSV
LQIAAHEEVVPLEELYRICETARELTLDPKYMVGRIIARPFVGEPGQFKRTPNRHDYALKPFDRTVMNELKDCGLDVISI
GKISDIYDGEGITSSRRTVSNMDGMDKVIDTLGEDFTGLSFANLVDFDALFGHRRDPEGYGRALEEFDARLPEVFEKMRE
DDLLIITADHGNDPIHHGTDHTREYVPILAYSKKHKKAQMLPLADTFADIGATIADNFQTNKPKYGKSFLSLLQ
>Mature_393_residues
PAYKYNRVFLIVMDSVGIGEAPDAADFNDEGAHTLGHIAEHMNGLHMPNMAKLGLGLIEDIKGVEKTEHPLAYYGKMQEA
SNGKDTMTGHWEIMGLYIDKPFKVFPEGFPDELLQELEKRSGRKIIGNKPASGTAILDELGQEHMETGALIVYTSADSVL
QIAAHEEVVPLEELYRICETARELTLDPKYMVGRIIARPFVGEPGQFKRTPNRHDYALKPFDRTVMNELKDCGLDVISIG
KISDIYDGEGITSSRRTVSNMDGMDKVIDTLGEDFTGLSFANLVDFDALFGHRRDPEGYGRALEEFDARLPEVFEKMRED
DLLIITADHGNDPIHHGTDHTREYVPILAYSKKHKKAQMLPLADTFADIGATIADNFQTNKPKYGKSFLSLLQ

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family

Homologues:

Organism=Escherichia coli, GI1790843, Length=412, Percent_Identity=45.1456310679612, Blast_Score=314, Evalue=7e-87,
Organism=Escherichia coli, GI1789781, Length=427, Percent_Identity=26.6978922716628, Blast_Score=119, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOB_BACSU (P46353)

Other databases:

- EMBL:   U32685
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   B69619
- RefSeq:   NP_390231.2
- ProteinModelPortal:   P46353
- SMR:   P46353
- PhosSite:   P46353
- EnsemblBacteria:   EBBACT00000003904
- GeneID:   938728
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23500
- NMPDR:   fig|224308.1.peg.2355
- GenoList:   BSU23500
- GeneTree:   EBGT00050000001645
- HOGENOM:   HBG644230
- PhylomeDB:   P46353
- ProtClustDB:   PRK05362
- BioCyc:   BSUB:BSU23500-MONOMER
- BRENDA:   5.4.2.7
- GO:   GO:0005737
- HAMAP:   MF_00740
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF001491
- TIGRFAMs:   TIGR01696

Pfam domain/function: PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.7

Molecular weight: Translated: 44020; Mature: 43888

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAYKYNRVFLIVMDSVGIGEAPDAADFNDEGAHTLGHIAEHMNGLHMPNMAKLGLGLIE
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
DIKGVEKTEHPLAYYGKMQEASNGKDTMTGHWEIMGLYIDKPFKVFPEGFPDELLQELEK
HHHCCHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHCCCCCCCHHHHHHHHH
RSGRKIIGNKPASGTAILDELGQEHMETGALIVYTSADSVLQIAAHEEVVPLEELYRICE
HCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHH
TARELTLDPKYMVGRIIARPFVGEPGQFKRTPNRHDYALKPFDRTVMNELKDCGLDVISI
HHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEC
GKISDIYDGEGITSSRRTVSNMDGMDKVIDTLGEDFTGLSFANLVDFDALFGHRRDPEGY
CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHH
GRALEEFDARLPEVFEKMREDDLLIITADHGNDPIHHGTDHTREYVPILAYSKKHKKAQM
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHEECCCCCHHHC
LPLADTFADIGATIADNFQTNKPKYGKSFLSLLQ
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure 
PAYKYNRVFLIVMDSVGIGEAPDAADFNDEGAHTLGHIAEHMNGLHMPNMAKLGLGLIE
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
DIKGVEKTEHPLAYYGKMQEASNGKDTMTGHWEIMGLYIDKPFKVFPEGFPDELLQELEK
HHHCCHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHCCCCCCCHHHHHHHHH
RSGRKIIGNKPASGTAILDELGQEHMETGALIVYTSADSVLQIAAHEEVVPLEELYRICE
HCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHH
TARELTLDPKYMVGRIIARPFVGEPGQFKRTPNRHDYALKPFDRTVMNELKDCGLDVISI
HHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEC
GKISDIYDGEGITSSRRTVSNMDGMDKVIDTLGEDFTGLSFANLVDFDALFGHRRDPEGY
CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHH
GRALEEFDARLPEVFEKMREDDLLIITADHGNDPIHHGTDHTREYVPILAYSKKHKKAQM
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHEECCCCCHHHC
LPLADTFADIGATIADNFQTNKPKYGKSFLSLLQ
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10537218; 8969508; 9384377