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The map label for this gene is ykwD

Identifier: 255767324

GI number: 255767324

Start: 1466638

End: 1467411

Strand: Reverse

Name: ykwD

Synonym: BSU13970

Alternate gene names: 255767324

Gene position: 1467411-1466638 (Counterclockwise)

Preceding gene: 255767325

Following gene: 255767322

Centisome position: 34.81

GC content: 40.18

Gene sequence:

>774_bases
ATGAAGAAAGCATTTATTTTATCTGCTGCCGCTGCGGTTGGATTATTCACATTCGGGGGCGTACAGCAAGCATCAGCGAA
AGAACTCTCCTGCCAGCCTGTGGTTACAGTAAAAACGGGGAACACAGTACAAAACATGTCACTTAACGATGCAGTGAAAA
AACTGCATATTAACACAAATATCAAAACGTTAAACGCTGCAAACGAAAAAGAGATGAAGCAGCTTCTTCAAAAACATGCG
AAGCAATCTAACGTGAAAGTTCAGGATGTTCAAAAGACAGAAACGGCAAAACCTGCACAAAAGACTACTGAAAAAGCAGC
TGCTGATCAAAACACTGCTTCTAAAGCACCCGCAACTGCTGAAAAAACAAACACAACAACGTCTGCACCTTCATCTGTAA
GTGCATATGAGAAAAAAGTTGTTGAACTTACAAATGCAGAAAGACAAAAACAAGGCTTAAAACCGCTTCAAATTGATGAA
ACGTTAAGCAAATCTGCACGCGCAAAATCTCAGGATATGAAAGACAAAAACTACTTTGATCACCAAAGCCCAACATACGG
CTCACCGTTTGATATGATGAAATCTTTCGGAATCAGCTACAAAACAGCAGGTGAAAACATTGCGAAGGGCCAAAAGACAC
CAGAAGAAGTAGTAAAAGCTTGGATGAACAGTGAAGGACACAGAAAAAACATTCTAAACCCTAACTTTACTCACATCGGT
GTTGGTTACGTTGAGTCTGGAAGCATCTGGACACAACAATTCATCGGAAAATAA

Upstream 100 bases:

>100_bases
AATCTCTATTTGTCAAAGGAAAGTGCTGGAATCTTTATGACAAAAAAGCTATGTTATGATTTTTCTGTAGAAACAAACAA
CTCTAGGAGGTTACGAACTA

Downstream 100 bases:

>100_bases
TAAAAAAAGATTGCCTGTTTCGTACAGGCAATCTTTTTTTATTTCACCCAAAGCTTATATATACTCTGTGTTCCGCTGTT
TTCTTCACCTTGAGCAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKKAFILSAAAAVGLFTFGGVQQASAKELSCQPVVTVKTGNTVQNMSLNDAVKKLHINTNIKTLNAANEKEMKQLLQKHA
KQSNVKVQDVQKTETAKPAQKTTEKAAADQNTASKAPATAEKTNTTTSAPSSVSAYEKKVVELTNAERQKQGLKPLQIDE
TLSKSARAKSQDMKDKNYFDHQSPTYGSPFDMMKSFGISYKTAGENIAKGQKTPEEVVKAWMNSEGHRKNILNPNFTHIG
VGYVESGSIWTQQFIGK

Sequences:

>Translated_257_residues
MKKAFILSAAAAVGLFTFGGVQQASAKELSCQPVVTVKTGNTVQNMSLNDAVKKLHINTNIKTLNAANEKEMKQLLQKHA
KQSNVKVQDVQKTETAKPAQKTTEKAAADQNTASKAPATAEKTNTTTSAPSSVSAYEKKVVELTNAERQKQGLKPLQIDE
TLSKSARAKSQDMKDKNYFDHQSPTYGSPFDMMKSFGISYKTAGENIAKGQKTPEEVVKAWMNSEGHRKNILNPNFTHIG
VGYVESGSIWTQQFIGK
>Mature_257_residues
MKKAFILSAAAAVGLFTFGGVQQASAKELSCQPVVTVKTGNTVQNMSLNDAVKKLHINTNIKTLNAANEKEMKQLLQKHA
KQSNVKVQDVQKTETAKPAQKTTEKAAADQNTASKAPATAEKTNTTTSAPSSVSAYEKKVVELTNAERQKQGLKPLQIDE
TLSKSARAKSQDMKDKNYFDHQSPTYGSPFDMMKSFGISYKTAGENIAKGQKTPEEVVKAWMNSEGHRKNILNPNFTHIG
VGYVESGSIWTQQFIGK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKWD_BACSU (O31398)

Other databases:

- EMBL:   AJ222587
- EMBL:   AL009126
- RefSeq:   NP_389280.2
- ProteinModelPortal:   O31398
- EnsemblBacteria:   EBBACT00000002421
- GeneID:   939237
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13970
- GenoList:   BSU13970
- GeneTree:   EBGT00050000000960
- HOGENOM:   HBG727581
- ProtClustDB:   CLSK887210
- BioCyc:   BSUB:BSU13970-MONOMER
- InterPro:   IPR014044
- InterPro:   IPR014258
- Gene3D:   G3DSA:3.40.33.10
- TIGRFAMs:   TIGR02909

Pfam domain/function: PF00188 SCP; SSF55797 SCP-like_extracellular

EC number: NA

Molecular weight: Translated: 28039; Mature: 28039

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAFILSAAAAVGLFTFGGVQQASAKELSCQPVVTVKTGNTVQNMSLNDAVKKLHINTN
CCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCCCEECCCHHHHHHHEECCCC
IKTLNAANEKEMKQLLQKHAKQSNVKVQDVQKTETAKPAQKTTEKAAADQNTASKAPATA
EEECCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
EKTNTTTSAPSSVSAYEKKVVELTNAERQKQGLKPLQIDETLSKSARAKSQDMKDKNYFD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
HQSPTYGSPFDMMKSFGISYKTAGENIAKGQKTPEEVVKAWMNSEGHRKNILNPNFTHIG
CCCCCCCCHHHHHHHHCCCEECCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEE
VGYVESGSIWTQQFIGK
CCEEECCCHHHHHHHCC
>Mature Secondary Structure
MKKAFILSAAAAVGLFTFGGVQQASAKELSCQPVVTVKTGNTVQNMSLNDAVKKLHINTN
CCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCCCEECCCHHHHHHHEECCCC
IKTLNAANEKEMKQLLQKHAKQSNVKVQDVQKTETAKPAQKTTEKAAADQNTASKAPATA
EEECCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
EKTNTTTSAPSSVSAYEKKVVELTNAERQKQGLKPLQIDETLSKSARAKSQDMKDKNYFD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
HQSPTYGSPFDMMKSFGISYKTAGENIAKGQKTPEEVVKAWMNSEGHRKNILNPNFTHIG
CCCCCCCCHHHHHHHHCCCEECCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEE
VGYVESGSIWTQQFIGK
CCEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377