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The map label for this gene is ykzQ

Identifier: 255767317

GI number: 255767317

Start: 1445314

End: 1445541

Strand: Direct

Name: ykzQ

Synonym: BSU13789

Alternate gene names: 255767317

Gene position: 1445314-1445541 (Clockwise)

Preceding gene: 16078442

Following gene: 16078443

Centisome position: 34.28

GC content: 33.33

Gene sequence:

>228_bases
ATGAAGGGGAAAATACCTAAAATAAGAAATCAAGCGAATAAAGTAAAAAGAACGCCTCGTTATATGGAATTTCCCGTGAC
ATACGAAGTATATCATGTGGAATCCGGCGATACATTATGGACGATTGCCAAATCCTTTGAAATTCCGGTACAACAACTTA
TGAATCTTAATAAGCTTTCTTCAGATAGAATTTATCCTGGACAAATTATAAAGATAAGAGAAAGATAA

Upstream 100 bases:

>100_bases
TTTCAAATCAGATCAAATATATGCTGGACAAATCATTAAGATTAGAGAGAAACTGTTTAGAAATATTAATAACAAATTAT
TCTAAAGGAGAGTAATATGA

Downstream 100 bases:

>100_bases
TCTTTGAGGTTTCGGAAGCGAATCAAATTGAAATGACAATCCTCATTTTTTTATTTGTGGGGAACTTGATATTTTTGGGG
ATGAAGGGGTTATGAGATGT

Product: peptidoglycan binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MKGKIPKIRNQANKVKRTPRYMEFPVTYEVYHVESGDTLWTIAKSFEIPVQQLMNLNKLSSDRIYPGQIIKIRER

Sequences:

>Translated_75_residues
MKGKIPKIRNQANKVKRTPRYMEFPVTYEVYHVESGDTLWTIAKSFEIPVQQLMNLNKLSSDRIYPGQIIKIRER
>Mature_75_residues
MKGKIPKIRNQANKVKRTPRYMEFPVTYEVYHVESGDTLWTIAKSFEIPVQQLMNLNKLSSDRIYPGQIIKIRER

Specific function: Unknown

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKZQ_BACSU (C0H403)

Other databases:

- EMBL:   AL009126
- RefSeq:   YP_003097719.1
- ProteinModelPortal:   C0H403
- SMR:   C0H403
- EnsemblBacteria:   EBBACT00000082729
- GeneID:   8303133
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13789
- GenoList:   BSU13789
- GeneTree:   EBGT00070000032704
- BioCyc:   BSUB:BSU13789-MONOMER
- InterPro:   IPR018392
- InterPro:   IPR002482
- SMART:   SM00257

Pfam domain/function: PF01476 LysM

EC number: NA

Molecular weight: Translated: 8895; Mature: 8895

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKIPKIRNQANKVKRTPRYMEFPVTYEVYHVESGDTLWTIAKSFEIPVQQLMNLNKLS
CCCCCCCHHHHHHHHHCCCCEEECCCEEEEEEECCCCEEEEEECCCCCCHHHHCCCCCCC
SDRIYPGQIIKIRER
CCCCCCCEEEEEECC
>Mature Secondary Structure
MKGKIPKIRNQANKVKRTPRYMEFPVTYEVYHVESGDTLWTIAKSFEIPVQQLMNLNKLS
CCCCCCCHHHHHHHHHCCCCEEECCCEEEEEEECCCCEEEEEECCCCCCHHHHCCCCCCC
SDRIYPGQIIKIRER
CCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377