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The map label for this gene is ykvP

Identifier: 16078442

GI number: 16078442

Start: 1444099

End: 1445298

Strand: Direct

Name: ykvP

Synonym: BSU13780

Alternate gene names: 16078442

Gene position: 1444099-1445298 (Clockwise)

Preceding gene: 16078441

Following gene: 255767317

Centisome position: 34.26

GC content: 38.25

Gene sequence:

>1200_bases
GTGAAAATTCTTTTCCTTGAGAGTCATCCCATGTGGCTCTATGGTTTACCGAATGGGTTTAGGGAAGCAGGACATACCGT
AATGATTTCCGGTCCTGTAAGTCGGGAAAATATAACTGAAATGATAGACGAATTTAAACCAGATTTAATAGTATCTATGG
GATGGACACCAGAGCATTCAAGGGAAAAGCAGGCCTGGATTCGCAACGCTACTAAAAAGGTGAATATCCCTCTCGTTTAT
TGGGCAACTGAAGACCCGCTGCACACTCAAAACTTTACTATCCCGTTAATTAAAAAGATGAAACCGGATTTTGTTTTCAC
GGTCACGCCTTCTCTGTGTAAAACTTATGAAAGCATGGGGATTAAAGCAGCTCACTTAGACTTTGCATTTCACGAAAGTA
TACATCACCAGATTAAACCATTAGCGAAATACAGTTGTGATATAGCAGTGGTGGCTAATGCTTACCCTAATTTTCTTGAA
GAACATCCGGAAGTGTTCCGTTCGTCCTCTTTAAAAACGCTTATTCGTCCTCTTATACGGAAGGGTATTCGCATTGATTT
TTGGGGGAGAAACTGGGAAAAAATGAGTAAATATATAGGAAGAGAAATTCCCCGCAATTGGATCCATGGATACCTTGATT
ATACTGAAGCATATAAAGTTTACAGTTCAGCAAAAATCATTATCGGTTTGCAAAACTGTGAAAGCCAACTTACACAACGC
ACCTATGAGATTCTTGGTTCCGGGGGGTTTTTATTGACATCGGATACACCAGCAGTTCGAGGTAAATTCAAACCTGGCCG
CGATCTCATCGTTTCTTCCTCCCCAAAAGAAACATTGGAAAAGGTTAAATACTATTTAAATCATGATAGCGAGAGAAAAA
AGATTCAGATAAACGGTAAAAAGGCTGTAAAGAATGATTCCTATCGGCATAGAGCCGAGAGAATGCTTGAGGTGCTAAAA
AGCAGAGGAATCATAAGAAACTTAGGGGAAACCATTCATTATGTAGATGTTCTCAAAGAAAAATACGTGATCCATCATGT
TACTCCCGGTGAAACATTATCAATAATTGCCAGTAAGTATAATGTTTCCCTGCAGCAACTCATGGAGCTTAATCATTTCA
AATCAGATCAAATATATGCTGGACAAATCATTAAGATTAGAGAGAAACTGTTTAGAAATATTAATAACAAATTATTCTAA

Upstream 100 bases:

>100_bases
ACACCTGAACGTTTTTTATAGACTAGTACCGCGACAAGTTATATTACATATACATACCAATAAAGTAGACATTAAAAAGT
GAAAGAGAGGATGGAAATGT

Downstream 100 bases:

>100_bases
AGGAGAGTAATATGAATGAAGGGGAAAATACCTAAAATAAGAAATCAAGCGAATAAAGTAAAAAGAACGCCTCGTTATAT
GGAATTTCCCGTGACATACG

Product: spore protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKILFLESHPMWLYGLPNGFREAGHTVMISGPVSRENITEMIDEFKPDLIVSMGWTPEHSREKQAWIRNATKKVNIPLVY
WATEDPLHTQNFTIPLIKKMKPDFVFTVTPSLCKTYESMGIKAAHLDFAFHESIHHQIKPLAKYSCDIAVVANAYPNFLE
EHPEVFRSSSLKTLIRPLIRKGIRIDFWGRNWEKMSKYIGREIPRNWIHGYLDYTEAYKVYSSAKIIIGLQNCESQLTQR
TYEILGSGGFLLTSDTPAVRGKFKPGRDLIVSSSPKETLEKVKYYLNHDSERKKIQINGKKAVKNDSYRHRAERMLEVLK
SRGIIRNLGETIHYVDVLKEKYVIHHVTPGETLSIIASKYNVSLQQLMELNHFKSDQIYAGQIIKIREKLFRNINNKLF

Sequences:

>Translated_399_residues
MKILFLESHPMWLYGLPNGFREAGHTVMISGPVSRENITEMIDEFKPDLIVSMGWTPEHSREKQAWIRNATKKVNIPLVY
WATEDPLHTQNFTIPLIKKMKPDFVFTVTPSLCKTYESMGIKAAHLDFAFHESIHHQIKPLAKYSCDIAVVANAYPNFLE
EHPEVFRSSSLKTLIRPLIRKGIRIDFWGRNWEKMSKYIGREIPRNWIHGYLDYTEAYKVYSSAKIIIGLQNCESQLTQR
TYEILGSGGFLLTSDTPAVRGKFKPGRDLIVSSSPKETLEKVKYYLNHDSERKKIQINGKKAVKNDSYRHRAERMLEVLK
SRGIIRNLGETIHYVDVLKEKYVIHHVTPGETLSIIASKYNVSLQQLMELNHFKSDQIYAGQIIKIREKLFRNINNKLF
>Mature_399_residues
MKILFLESHPMWLYGLPNGFREAGHTVMISGPVSRENITEMIDEFKPDLIVSMGWTPEHSREKQAWIRNATKKVNIPLVY
WATEDPLHTQNFTIPLIKKMKPDFVFTVTPSLCKTYESMGIKAAHLDFAFHESIHHQIKPLAKYSCDIAVVANAYPNFLE
EHPEVFRSSSLKTLIRPLIRKGIRIDFWGRNWEKMSKYIGREIPRNWIHGYLDYTEAYKVYSSAKIIIGLQNCESQLTQR
TYEILGSGGFLLTSDTPAVRGKFKPGRDLIVSSSPKETLEKVKYYLNHDSERKKIQINGKKAVKNDSYRHRAERMLEVLK
SRGIIRNLGETIHYVDVLKEKYVIHHVTPGETLSIIASKYNVSLQQLMELNHFKSDQIYAGQIIKIREKLFRNINNKLF

Specific function: Unknown

COG id: COG4641

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Spore wall (Probable). Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKVP_BACSU (O31681)

Other databases:

- EMBL:   AL009126
- PIR:   G69868
- RefSeq:   NP_389261.1
- ProteinModelPortal:   O31681
- EnsemblBacteria:   EBBACT00000003879
- GeneID:   939278
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13780
- NMPDR:   fig|224308.1.peg.1380
- GenoList:   BSU13780
- GeneTree:   EBGT00070000032704
- OMA:   ILFLESH
- ProtClustDB:   CLSK806664
- BioCyc:   BSUB:BSU13780-MONOMER
- InterPro:   IPR018392
- InterPro:   IPR002482
- SMART:   SM00257

Pfam domain/function: PF01476 LysM

EC number: NA

Molecular weight: Translated: 46296; Mature: 46296

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFLESHPMWLYGLPNGFREAGHTVMISGPVSRENITEMIDEFKPDLIVSMGWTPEHS
CEEEEEECCCEEEEECCCHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCC
REKQAWIRNATKKVNIPLVYWATEDPLHTQNFTIPLIKKMKPDFVFTVTPSLCKTYESMG
HHHHHHHHCCCEEECCEEEEEECCCCCCCCCCCCHHHHHCCCCEEEEECHHHHHHHHHCC
IKAAHLDFAFHESIHHQIKPLAKYSCDIAVVANAYPNFLEEHPEVFRSSSLKTLIRPLIR
CEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHH
KGIRIDFWGRNWEKMSKYIGREIPRNWIHGYLDYTEAYKVYSSAKIIIGLQNCESQLTQR
CCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
TYEILGSGGFLLTSDTPAVRGKFKPGRDLIVSSSPKETLEKVKYYLNHDSERKKIQINGK
HHHHHCCCCEEEECCCCHHCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCEEEECCC
KAVKNDSYRHRAERMLEVLKSRGIIRNLGETIHYVDVLKEKYVIHHVTPGETLSIIASKY
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHH
NVSLQQLMELNHFKSDQIYAGQIIKIREKLFRNINNKLF
CCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKILFLESHPMWLYGLPNGFREAGHTVMISGPVSRENITEMIDEFKPDLIVSMGWTPEHS
CEEEEEECCCEEEEECCCHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCC
REKQAWIRNATKKVNIPLVYWATEDPLHTQNFTIPLIKKMKPDFVFTVTPSLCKTYESMG
HHHHHHHHCCCEEECCEEEEEECCCCCCCCCCCCHHHHHCCCCEEEEECHHHHHHHHHCC
IKAAHLDFAFHESIHHQIKPLAKYSCDIAVVANAYPNFLEEHPEVFRSSSLKTLIRPLIR
CEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHH
KGIRIDFWGRNWEKMSKYIGREIPRNWIHGYLDYTEAYKVYSSAKIIIGLQNCESQLTQR
CCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
TYEILGSGGFLLTSDTPAVRGKFKPGRDLIVSSSPKETLEKVKYYLNHDSERKKIQINGK
HHHHHCCCCEEEECCCCHHCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCEEEECCC
KAVKNDSYRHRAERMLEVLKSRGIIRNLGETIHYVDVLKEKYVIHHVTPGETLSIIASKY
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHH
NVSLQQLMELNHFKSDQIYAGQIIKIREKLFRNINNKLF
CCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377