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The map label for this gene is yjhB

Identifier: 255767276

GI number: 255767276

Start: 1290018

End: 1290644

Strand: Direct

Name: yjhB

Synonym: BSU12190

Alternate gene names: 255767276

Gene position: 1290018-1290644 (Clockwise)

Preceding gene: 16078283

Following gene: 16078286

Centisome position: 30.6

GC content: 50.56

Gene sequence:

>627_bases
GTGATAAAAGTGCAAACCAAATGGCTGGAACGGGCACAGCGGATTCGGGCGATCGCCCAAGCGGGGCTTGCTTTTTCCAA
GGATGTGTACGACAGGGAGAGGTACGAAGAGCTAATGAAGCTTAGCGCGGAAATGATGGCGGATTACTCGGAGAAGGACA
TTGAAGTTATCACTGATTTATGGCAAGGCGAGAAGGGCTATCCAACACCGAAAGCGGATGTTCGCGGCGCTGTATTCAGA
GAGAATCAGATTTTGCTTGTCCGGGAGAAGCATGATGAGCTGTGGTCGCTGCCGGGCGGATTTTGCGAGATTGGTTTATC
GCCGGCTGAAAACGTTGTCAAGGAAATCAAAGAAGAGTCGGGGTACGATACAGAGCCGTCTCGATTGCTGGCCGTGCTAG
ACAGCCATAAACACTCTCATCCCCCTCAGCCTTATCACTATTATAAAATCTTCATCGCATGCAGCATGACGGACGGGCAG
GGGGAAACAGGGATCGAGACGAATCATGCCGCTTTTTTTCCGGAAGACAGACTCCCGCCGCTTTCTCCTAAACGAAACAC
ACCCTCACAGCTTAGCATGCTGTTTGACTTTTTGCGCCATCCGGACAAGAAAACGATATTTGACTAA

Upstream 100 bases:

>100_bases
TTACTTGGTGAAGTTAGATTAGATGCTAATTTACAGTTGCACGTTTTTCATCTGTGGAAAACGTGCATTTTTTATAGCGA
AACTTGACTTGAAAGGATGA

Downstream 100 bases:

>100_bases
AAAAGAAAGAGCCTGTGGGCTCTTTCTTTTTTATAATGTAATGTGTTTTTCGTTGGCGAGTTTCAGAAGGGTCAAAATAG
AATCGGCTTGTTTATGGCCG

Product: ADP-ribose pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MIKVQTKWLERAQRIRAIAQAGLAFSKDVYDRERYEELMKLSAEMMADYSEKDIEVITDLWQGEKGYPTPKADVRGAVFR
ENQILLVREKHDELWSLPGGFCEIGLSPAENVVKEIKEESGYDTEPSRLLAVLDSHKHSHPPQPYHYYKIFIACSMTDGQ
GETGIETNHAAFFPEDRLPPLSPKRNTPSQLSMLFDFLRHPDKKTIFD

Sequences:

>Translated_208_residues
MIKVQTKWLERAQRIRAIAQAGLAFSKDVYDRERYEELMKLSAEMMADYSEKDIEVITDLWQGEKGYPTPKADVRGAVFR
ENQILLVREKHDELWSLPGGFCEIGLSPAENVVKEIKEESGYDTEPSRLLAVLDSHKHSHPPQPYHYYKIFIACSMTDGQ
GETGIETNHAAFFPEDRLPPLSPKRNTPSQLSMLFDFLRHPDKKTIFD
>Mature_208_residues
MIKVQTKWLERAQRIRAIAQAGLAFSKDVYDRERYEELMKLSAEMMADYSEKDIEVITDLWQGEKGYPTPKADVRGAVFR
ENQILLVREKHDELWSLPGGFCEIGLSPAENVVKEIKEESGYDTEPSRLLAVLDSHKHSHPPQPYHYYKIFIACSMTDGQ
GETGIETNHAAFFPEDRLPPLSPKRNTPSQLSMLFDFLRHPDKKTIFD

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJHB_BACSU (C0SPC3)

Other databases:

- EMBL:   AF015825
- EMBL:   AL009126
- PIR:   H69850
- RefSeq:   NP_389101.2
- ProteinModelPortal:   C0SPC3
- SMR:   C0SPC3
- EnsemblBacteria:   EBBACT00000001178
- GeneID:   939419
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12190
- GenoList:   BSU12190
- GeneTree:   EBGT00070000031943
- HOGENOM:   HBG685697
- ProtClustDB:   CLSK2816772
- BioCyc:   BSUB:BSU12190-MONOMER
- InterPro:   IPR000086
- InterPro:   IPR015797
- Gene3D:   G3DSA:3.90.79.10

Pfam domain/function: PF00293 NUDIX; SSF55811 NUDIX_hydrolase

EC number: NA

Molecular weight: Translated: 23943; Mature: 23943

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS51462 NUDIX; PS00893 NUDIX_BOX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVQTKWLERAQRIRAIAQAGLAFSKDVYDRERYEELMKLSAEMMADYSEKDIEVITDL
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
WQGEKGYPTPKADVRGAVFRENQILLVREKHDELWSLPGGFCEIGLSPAENVVKEIKEES
HCCCCCCCCCCCCCCCEEEECCCEEEEECCCHHHHCCCCCCEECCCCHHHHHHHHHHHHC
GYDTEPSRLLAVLDSHKHSHPPQPYHYYKIFIACSMTDGQGETGIETNHAAFFPEDRLPP
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEECCCCCCCC
LSPKRNTPSQLSMLFDFLRHPDKKTIFD
CCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIKVQTKWLERAQRIRAIAQAGLAFSKDVYDRERYEELMKLSAEMMADYSEKDIEVITDL
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
WQGEKGYPTPKADVRGAVFRENQILLVREKHDELWSLPGGFCEIGLSPAENVVKEIKEES
HCCCCCCCCCCCCCCCEEEECCCEEEEECCCHHHHCCCCCCEECCCCHHHHHHHHHHHHC
GYDTEPSRLLAVLDSHKHSHPPQPYHYYKIFIACSMTDGQGETGIETNHAAFFPEDRLPP
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEECCCCCCCC
LSPKRNTPSQLSMLFDFLRHPDKKTIFD
CCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377