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The map label for this gene is yjfC

Identifier: 255767275

GI number: 255767275

Start: 1283463

End: 1284362

Strand: Direct

Name: yjfC

Synonym: BSU12130

Alternate gene names: 255767275

Gene position: 1283463-1284362 (Clockwise)

Preceding gene: 16078275

Following gene: 16078281

Centisome position: 30.45

GC content: 43.56

Gene sequence:

>900_bases
ATGAATCTAGTAATGGAAAAGACCTTTGAGCAATACGAAAAGCTGTTTTCAATGGAAGAACAGAAAAGAGAAGATGTATT
TCGGTATACGATGATGAGGCCGTTTGAAAAGATGTGGACCGCCATCCAAGTTCCGCTGAAAGCGAAGGAGCCAAACGGCT
ATGATGTGATCATGGCTGCGAAAATGCTGGGCTATTTGGATGTCCGTGATGCTGAAAGCGGCCAGAAAGCACTACAAATA
CTGAAAGAATCACATGTTTCAGAGACAGCTGAATCTGCACTTCGGCAATGCATATTTTTTGCTGAGCGCGAACAGCTGCG
GGTGAATGCAAAGGAGATCAAATTCGGCCTTTATATCGCTGATCCAAATAAGCTTCAGCTGCAAAAAGGCTACTGCGGGT
TTGGCGGGATACCGGGCTTTATTCATGTATGGATTAATCCGAACAGTTATAACCTGCCAAGGATTCCTTCCATTATTGCT
CATGAGTTTCATCATAATGTGCGGTTTTCGTATATAGATTTTCATCATGGCTCTGTAAGTGTCGGGGATTATCTTGTGAT
TGAAGGATTGGCGGAATCATTCGCCAGAGAGCTGTTTGGTACGGAACGATTGGGCCCTTGGGTAACTCGTTTTGATCATG
AAGACTTGCAATATTCCATTGATGTGATTAATGAGGTGCTGGATGTGAAAGGATTTTCGGAAGTCAGCCGTTATATGTTT
GGTGATCCAATTGCTAACGACCAAGGCTTTAAGCCTGCAGGTTTATCGGCTTTTGCGGGTTATGCAGTTGGCTATCATGC
CGTTCAGTCATTTATGAATCAACATCATATCACGATAAGCGAGGCCACACGTTTGGATGCGAAGACCATTATTTCTCAAT
GCGGTCTGTTTTCTACATGA

Upstream 100 bases:

>100_bases
CGGCGGGTTTGTATGATTTTACAGTGAAAAATGGCTTAATTTCTCTTGTTGACCCTTACGCTGCGGCATATCGTATGTTT
TTGACAAGGAGGGAATCAGG

Downstream 100 bases:

>100_bases
AAAAAGCGTCACATACAGCGGCGCTTTTTGATTCCCAAAACCAGCAGTTCTATGGCGGCACAGGCGGCAATTCCGATTGT
ATATGCTTCGATATCGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MNLVMEKTFEQYEKLFSMEEQKREDVFRYTMMRPFEKMWTAIQVPLKAKEPNGYDVIMAAKMLGYLDVRDAESGQKALQI
LKESHVSETAESALRQCIFFAEREQLRVNAKEIKFGLYIADPNKLQLQKGYCGFGGIPGFIHVWINPNSYNLPRIPSIIA
HEFHHNVRFSYIDFHHGSVSVGDYLVIEGLAESFARELFGTERLGPWVTRFDHEDLQYSIDVINEVLDVKGFSEVSRYMF
GDPIANDQGFKPAGLSAFAGYAVGYHAVQSFMNQHHITISEATRLDAKTIISQCGLFST

Sequences:

>Translated_299_residues
MNLVMEKTFEQYEKLFSMEEQKREDVFRYTMMRPFEKMWTAIQVPLKAKEPNGYDVIMAAKMLGYLDVRDAESGQKALQI
LKESHVSETAESALRQCIFFAEREQLRVNAKEIKFGLYIADPNKLQLQKGYCGFGGIPGFIHVWINPNSYNLPRIPSIIA
HEFHHNVRFSYIDFHHGSVSVGDYLVIEGLAESFARELFGTERLGPWVTRFDHEDLQYSIDVINEVLDVKGFSEVSRYMF
GDPIANDQGFKPAGLSAFAGYAVGYHAVQSFMNQHHITISEATRLDAKTIISQCGLFST
>Mature_299_residues
MNLVMEKTFEQYEKLFSMEEQKREDVFRYTMMRPFEKMWTAIQVPLKAKEPNGYDVIMAAKMLGYLDVRDAESGQKALQI
LKESHVSETAESALRQCIFFAEREQLRVNAKEIKFGLYIADPNKLQLQKGYCGFGGIPGFIHVWINPNSYNLPRIPSIIA
HEFHHNVRFSYIDFHHGSVSVGDYLVIEGLAESFARELFGTERLGPWVTRFDHEDLQYSIDVINEVLDVKGFSEVSRYMF
GDPIANDQGFKPAGLSAFAGYAVGYHAVQSFMNQHHITISEATRLDAKTIISQCGLFST

Specific function: Unknown

COG id: COG5504

COG function: function code O; Predicted Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJFC_BACSU (O34458)

Other databases:

- EMBL:   AF015825
- EMBL:   AL009126
- PIR:   B69850
- RefSeq:   NP_389095.2
- EnsemblBacteria:   EBBACT00000000147
- GeneID:   939398
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12130
- NMPDR:   fig|224308.1.peg.1214
- GenoList:   BSU12130
- GeneTree:   EBGT00050000001914
- HOGENOM:   HBG733255
- ProtClustDB:   CLSK887096
- BioCyc:   BSUB:BSU12130-MONOMER
- InterPro:   IPR018728

Pfam domain/function: PF10026 DUF2268

EC number: NA

Molecular weight: Translated: 34160; Mature: 34160

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLVMEKTFEQYEKLFSMEEQKREDVFRYTMMRPFEKMWTAIQVPLKAKEPNGYDVIMAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHH
KMLGYLDVRDAESGQKALQILKESHVSETAESALRQCIFFAEREQLRVNAKEIKFGLYIA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEE
DPNKLQLQKGYCGFGGIPGFIHVWINPNSYNLPRIPSIIAHEFHHNVRFSYIDFHHGSVS
CCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCC
VGDYLVIEGLAESFARELFGTERLGPWVTRFDHEDLQYSIDVINEVLDVKGFSEVSRYMF
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHC
GDPIANDQGFKPAGLSAFAGYAVGYHAVQSFMNQHHITISEATRLDAKTIISQCGLFST
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNLVMEKTFEQYEKLFSMEEQKREDVFRYTMMRPFEKMWTAIQVPLKAKEPNGYDVIMAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHH
KMLGYLDVRDAESGQKALQILKESHVSETAESALRQCIFFAEREQLRVNAKEIKFGLYIA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEE
DPNKLQLQKGYCGFGGIPGFIHVWINPNSYNLPRIPSIIAHEFHHNVRFSYIDFHHGSVS
CCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCC
VGDYLVIEGLAESFARELFGTERLGPWVTRFDHEDLQYSIDVINEVLDVKGFSEVSRYMF
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHC
GDPIANDQGFKPAGLSAFAGYAVGYHAVQSFMNQHHITISEATRLDAKTIISQCGLFST
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377