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The map label for this gene is yjeA

Identifier: 16078275

GI number: 16078275

Start: 1281128

End: 1282531

Strand: Direct

Name: yjeA

Synonym: BSU12100

Alternate gene names: 16078275

Gene position: 1281128-1282531 (Clockwise)

Preceding gene: 16078271

Following gene: 255767275

Centisome position: 30.39

GC content: 38.75

Gene sequence:

>1404_bases
TTGTTGGCAAAAAGAATCAAATGGTTTCATGTATTAATAGCAGTTGTATGTGTGGTGGGCCTTATCGGCTTTTTCCATAA
TCATTCATTGAAAAAAGAAACGGTCATGAATAAAGTAAGAACTGATTCTCAATATGGGAATGTTGAGATCGCAACGCTTG
TGAATGACGGGAAAACTTTTAATTACGCGGTAAACTATCCTGTTTTCAAAAATGAAAAAATGGATTCGGCATTAAAAAGA
TTCGCAGAAAAAGAGGTTCGTCAATTTCAAAAGGAAACAAAGGACGTTGACCAAGAGCATACGACAAAACGCAACGAATT
AAATGTTGATTATAAAATTGTCCATTATGCCAAACAGACAGTGGCGATTGTATTTAATGAATATAAATACATCGGCGGGG
CACACGGGCAAACCGTGAAAAAAACGTTTAACTATGATTTTAGTAAACAAGCGTTTCTTTCCATTGATGATATTTTCAAA
GAGGACGCTGACTACTTACATAAGCTTTCGTTAATCGCTTATCACGAGCTGAAAAAGAATAAGGACATTGCCGCGGACGA
TGCACTGTTAAAGGAAGGGACGGCTCCGAAAAAAGAAAATTTCAGCCGCTTTGCCATCAAGGAGGATTATATCGAACTTT
ACTTTGACACATATCAGGTTGCAGCAGGCTATCTTGGAGAGCAATCGATTGCCATTAAGAAAAGTCTTTTGAAAGACATT
CTGAAAGAACAATATATTGATAAAGCAAAAAATAAAAATAAAATCAAAGAACAAAAGCCGAAGCATGAAGTGATTTCTTT
ACCCAAAGAGGAAACAGTTGATCCAAATCAAAAAGTCATTGCGCTTACTTTCGACGACGGCCCGAATCCTGCGACAACAA
ATCAGATTCTAGACTCCTTGAAGAAATATAAGGGTCATGCCACGTTTTTTGTTTTGGGGAGCAGAGTTCAATATTATCCG
GAAACGCTAATAAGAATGCTGAAAGAAGGAAATGAGGTTGGGAACCATTCATGGAGCCATCCGCTTCTCACAAGGCTTTC
AGTGAAAGAAGCGTTAAAGCAGATCAATGATACGCAAGACATCATTGAAAAAATAAGCGGATATCGTCCGACGCTTGTAA
GACCCCCATACGGCGGCATTAATGATGAACTGCGGAGTCAAATGAAAATGGATGTTGCGTTATGGGATGTTGACCCGGAA
GATTGGAAAGACCGTAACAAAAAAACAATTGTTGACCGTGTCATGAATCAGGCGGGAGATGGAAGAACCATTTTGATTCA
CGATATTTACCGCACCTCTGCTGATGCGGCCGATGAAATTATAAAAAAGCTCACCGATCAAGGCTATCAATTGGTGACAG
TTTCTCAGCTTGAAGAGGTTAAAAAACAAAGAGAAGCGAAATAA

Upstream 100 bases:

>100_bases
GAAATAAATGTTACTACAATGTTACAAAAACATTTCTAAATAGATACAGTTCCAACTGATGAAGAGTAAATCGAAATGGC
TACGAAAGAAGGAGTTTTTG

Downstream 100 bases:

>100_bases
ATTAGAAAAGGCTGTCCGTACGGACAGCCTTTTTTCTATTTAATAAGAGCCTGTGGTGGCCCAAACATTTAAGTTTGGTC
CTGAATACTTGCCGAAAGCG

Product: secreted deoxyriboendonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MLAKRIKWFHVLIAVVCVVGLIGFFHNHSLKKETVMNKVRTDSQYGNVEIATLVNDGKTFNYAVNYPVFKNEKMDSALKR
FAEKEVRQFQKETKDVDQEHTTKRNELNVDYKIVHYAKQTVAIVFNEYKYIGGAHGQTVKKTFNYDFSKQAFLSIDDIFK
EDADYLHKLSLIAYHELKKNKDIAADDALLKEGTAPKKENFSRFAIKEDYIELYFDTYQVAAGYLGEQSIAIKKSLLKDI
LKEQYIDKAKNKNKIKEQKPKHEVISLPKEETVDPNQKVIALTFDDGPNPATTNQILDSLKKYKGHATFFVLGSRVQYYP
ETLIRMLKEGNEVGNHSWSHPLLTRLSVKEALKQINDTQDIIEKISGYRPTLVRPPYGGINDELRSQMKMDVALWDVDPE
DWKDRNKKTIVDRVMNQAGDGRTILIHDIYRTSADAADEIIKKLTDQGYQLVTVSQLEEVKKQREAK

Sequences:

>Translated_467_residues
MLAKRIKWFHVLIAVVCVVGLIGFFHNHSLKKETVMNKVRTDSQYGNVEIATLVNDGKTFNYAVNYPVFKNEKMDSALKR
FAEKEVRQFQKETKDVDQEHTTKRNELNVDYKIVHYAKQTVAIVFNEYKYIGGAHGQTVKKTFNYDFSKQAFLSIDDIFK
EDADYLHKLSLIAYHELKKNKDIAADDALLKEGTAPKKENFSRFAIKEDYIELYFDTYQVAAGYLGEQSIAIKKSLLKDI
LKEQYIDKAKNKNKIKEQKPKHEVISLPKEETVDPNQKVIALTFDDGPNPATTNQILDSLKKYKGHATFFVLGSRVQYYP
ETLIRMLKEGNEVGNHSWSHPLLTRLSVKEALKQINDTQDIIEKISGYRPTLVRPPYGGINDELRSQMKMDVALWDVDPE
DWKDRNKKTIVDRVMNQAGDGRTILIHDIYRTSADAADEIIKKLTDQGYQLVTVSQLEEVKKQREAK
>Mature_467_residues
MLAKRIKWFHVLIAVVCVVGLIGFFHNHSLKKETVMNKVRTDSQYGNVEIATLVNDGKTFNYAVNYPVFKNEKMDSALKR
FAEKEVRQFQKETKDVDQEHTTKRNELNVDYKIVHYAKQTVAIVFNEYKYIGGAHGQTVKKTFNYDFSKQAFLSIDDIFK
EDADYLHKLSLIAYHELKKNKDIAADDALLKEGTAPKKENFSRFAIKEDYIELYFDTYQVAAGYLGEQSIAIKKSLLKDI
LKEQYIDKAKNKNKIKEQKPKHEVISLPKEETVDPNQKVIALTFDDGPNPATTNQILDSLKKYKGHATFFVLGSRVQYYP
ETLIRMLKEGNEVGNHSWSHPLLTRLSVKEALKQINDTQDIIEKISGYRPTLVRPPYGGINDELRSQMKMDVALWDVDPE
DWKDRNKKTIVDRVMNQAGDGRTILIHDIYRTSADAADEIIKKLTDQGYQLVTVSQLEEVKKQREAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=177, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6323338, Length=171, Percent_Identity=33.9181286549708, Blast_Score=94, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJEA_BACSU (O34798)

Other databases:

- EMBL:   AF015825
- EMBL:   AL009126
- PIR:   G69849
- RefSeq:   NP_389092.1
- ProteinModelPortal:   O34798
- SMR:   O34798
- EnsemblBacteria:   EBBACT00000002647
- GeneID:   936440
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12100
- NMPDR:   fig|224308.1.peg.1211
- GenoList:   BSU12100
- GeneTree:   EBGT00070000031946
- HOGENOM:   HBG344953
- OMA:   SRVQYYP
- PhylomeDB:   O34798
- ProtClustDB:   CLSK887093
- BioCyc:   BSUB:BSU12100-MONOMER
- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509
- Gene3D:   G3DSA:3.20.20.370
- PIRSF:   PIRSF037479

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 53839; Mature: 53839

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCEEEEEEHHHCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCC
>Mature Secondary Structure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CCEEEEEEHHHCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377