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The map label for this gene is ygaK

Identifier: 255767203

GI number: 255767203

Start: 957705

End: 959060

Strand: Reverse

Name: ygaK

Synonym: BSU08800

Alternate gene names: 255767203

Gene position: 959060-957705 (Counterclockwise)

Preceding gene: 255767204

Following gene: 255767200

Centisome position: 22.75

GC content: 46.17

Gene sequence:

>1356_bases
GTGGAAAAGACAAAATTGACCGGACGTATCGTGACACGGGATGATCCGGACTATAACGAAGCAAGAACCAATATTAACCT
AAGCTTAGAAAGGTATCCTGACATCATTGTGTTTTGCCAAAACAAACAGGATGCACTCAATGCGCTGAAATGGGCGCGTG
AAAACCGTGTGCCTTTCCGTATTAGAGGCGGCAGACACAGCTATGAGAACTTTTCCCTTTTAAATAACGGTCTTGTTATT
GATTTAAGCGAGATGAAAAAAATAACTGTGAATCAGGATAAAAAGCTGGCCTATATTGAAGCGGGGGCTGAATTGGGAGA
AGTCTATCGGACACTCTGGCAATACGGCCTGACGCTTCCCGCAGGCACCATTGCTAATGTAGGGCTCACAGGTTTAACTC
TCGGAGGGGGAATTGGACTTTTAACAAGGGCTGCCGGTCTTACTTGCGACAGCCTCGTGCAGCTTGAGATGATCGTAGCA
GACGAAAAAGAGGGCGCTGATCTGATTACAGTCAGCTGTTCAAATCATCCAGACTTATTTTGGGCGTCTCAGGGAGGCGG
AGGAGGCAATTTCGGCATAGTCACCTCCATGACATTTAAAGCAGTGCCCATCTCTCAAGTGTCGATTTTTTCTATTACAT
GGGGATGGGATGATTTTGAGGAAGTATATAACACGTGGCAGAACTGGGCCCCGTATACAGATGACCGGCTTACATCATCA
ATAGAGTTTTGGCCTAAAGAAGTAAACCGCATAGAAGCCCTCGGCCAATTTGTCGGGCCAAAAACAGAGTTAAAAAAACT
GTTAAAGCCTTTATTGAAAGCAGGAAGTCCGACAAGCGGAATGGTAAAAACAACGCCATTCATTGAAGCGGTAACCTTTT
TTAACAGCCCGGGAGGCAATCAGCCTCAAAAAATGAAACGCTCCGGCTCTTTCATTGAAAAGCCATTATCAGAACGTGCG
ATCTCAACAATAAAACACTTTTTAGAGCACGCTCCGAATCAAAACGCCAGTGTCTGGCAGCAAGCACTCGGCGGGGCAGC
CGGACGGGTCGCTCCCGACCAAACGGCATTTTATTATCGTGACGCAATCATCGCCCAGGAATACTTAACAAACTGGACAT
CCCCTGGAGAAAAAAGACAAAATGTCCGCTGGATTGAGGGGCTGAGAACGTCCCTTTCGAAAGAAACGATGGGAGACTAC
GTAAATTGGCCAGATATCGAAATCAGAAACTGGCCAAGAACATATTACGGCGAAAACGTTGAACGACTCCGCCGTGTCAA
AACGACATATGATCCAGAAAATGTTTTCCGCTTTGAACAGAGTATTCCTCCGCTTCGACGCTCTCTGTTTTTCTAA

Upstream 100 bases:

>100_bases
ACACTGTATCAGATTGCATCCCCGCTTTTTCCTTATACACTCTTTTCCCCTGACGCATAAGCTAGAGAAACTAGAATACG
AGAGAAAGAGATGTGGGAGT

Downstream 100 bases:

>100_bases
AAAAATGAAGATGGAGCATTCTCCATCTTCATTTTTTTTATTGATATAAATTGCTTCCCGTATCGACAAACTCTTTTGCT
TTTTCTTTTAATCCTTTATT

Product: FAD-dependent oxido-reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MEKTKLTGRIVTRDDPDYNEARTNINLSLERYPDIIVFCQNKQDALNALKWARENRVPFRIRGGRHSYENFSLLNNGLVI
DLSEMKKITVNQDKKLAYIEAGAELGEVYRTLWQYGLTLPAGTIANVGLTGLTLGGGIGLLTRAAGLTCDSLVQLEMIVA
DEKEGADLITVSCSNHPDLFWASQGGGGGNFGIVTSMTFKAVPISQVSIFSITWGWDDFEEVYNTWQNWAPYTDDRLTSS
IEFWPKEVNRIEALGQFVGPKTELKKLLKPLLKAGSPTSGMVKTTPFIEAVTFFNSPGGNQPQKMKRSGSFIEKPLSERA
ISTIKHFLEHAPNQNASVWQQALGGAAGRVAPDQTAFYYRDAIIAQEYLTNWTSPGEKRQNVRWIEGLRTSLSKETMGDY
VNWPDIEIRNWPRTYYGENVERLRRVKTTYDPENVFRFEQSIPPLRRSLFF

Sequences:

>Translated_451_residues
MEKTKLTGRIVTRDDPDYNEARTNINLSLERYPDIIVFCQNKQDALNALKWARENRVPFRIRGGRHSYENFSLLNNGLVI
DLSEMKKITVNQDKKLAYIEAGAELGEVYRTLWQYGLTLPAGTIANVGLTGLTLGGGIGLLTRAAGLTCDSLVQLEMIVA
DEKEGADLITVSCSNHPDLFWASQGGGGGNFGIVTSMTFKAVPISQVSIFSITWGWDDFEEVYNTWQNWAPYTDDRLTSS
IEFWPKEVNRIEALGQFVGPKTELKKLLKPLLKAGSPTSGMVKTTPFIEAVTFFNSPGGNQPQKMKRSGSFIEKPLSERA
ISTIKHFLEHAPNQNASVWQQALGGAAGRVAPDQTAFYYRDAIIAQEYLTNWTSPGEKRQNVRWIEGLRTSLSKETMGDY
VNWPDIEIRNWPRTYYGENVERLRRVKTTYDPENVFRFEQSIPPLRRSLFF
>Mature_451_residues
MEKTKLTGRIVTRDDPDYNEARTNINLSLERYPDIIVFCQNKQDALNALKWARENRVPFRIRGGRHSYENFSLLNNGLVI
DLSEMKKITVNQDKKLAYIEAGAELGEVYRTLWQYGLTLPAGTIANVGLTGLTLGGGIGLLTRAAGLTCDSLVQLEMIVA
DEKEGADLITVSCSNHPDLFWASQGGGGGNFGIVTSMTFKAVPISQVSIFSITWGWDDFEEVYNTWQNWAPYTDDRLTSS
IEFWPKEVNRIEALGQFVGPKTELKKLLKPLLKAGSPTSGMVKTTPFIEAVTFFNSPGGNQPQKMKRSGSFIEKPLSERA
ISTIKHFLEHAPNQNASVWQQALGGAAGRVAPDQTAFYYRDAIIAQEYLTNWTSPGEKRQNVRWIEGLRTSLSKETMGDY
VNWPDIEIRNWPRTYYGENVERLRRVKTTYDPENVFRFEQSIPPLRRSLFF

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGAK_BACSU (Q796Y5)

Other databases:

- EMBL:   Z82044
- EMBL:   AL009126
- RefSeq:   NP_388760.2
- HSSP:   Q6PW77
- ProteinModelPortal:   Q796Y5
- SMR:   Q796Y5
- EnsemblBacteria:   EBBACT00000001177
- GeneID:   939245
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08800
- NMPDR:   fig|224308.1.peg.879
- GenoList:   BSU08800
- GeneTree:   EBGT00050000001202
- HOGENOM:   HBG672185
- ProtClustDB:   CLSK2793850
- BioCyc:   BSUB:BSU08800-MONOMER
- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- Gene3D:   G3DSA:3.30.43.10
- Gene3D:   G3DSA:3.30.465.20

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4; SSF56176 FAD-binding_2

EC number: NA

Molecular weight: Translated: 50900; Mature: 50900

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS51387 FAD_PCMH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTKLTGRIVTRDDPDYNEARTNINLSLERYPDIIVFCQNKQDALNALKWARENRVPFR
CCCCCCCEEEEECCCCCHHHHHCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCEE
IRGGRHSYENFSLLNNGLVIDLSEMKKITVNQDKKLAYIEAGAELGEVYRTLWQYGLTLP
EECCCCCCCCHHEECCCEEEEHHHCCEEECCCCCEEEEEECCHHHHHHHHHHHHCCCCCC
AGTIANVGLTGLTLGGGIGLLTRAAGLTCDSLVQLEMIVADEKEGADLITVSCSNHPDLF
CCHHHHCCCCEEEECCCHHHHHHHCCCCHHHHHEEEEEEECCCCCCCEEEEEECCCCCEE
WASQGGGGGNFGIVTSMTFKAVPISQVSIFSITWGWDDFEEVYNTWQNWAPYTDDRLTSS
EECCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHH
IEFWPKEVNRIEALGQFVGPKTELKKLLKPLLKAGSPTSGMVKTTPFIEAVTFFNSPGGN
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCCCC
QPQKMKRSGSFIEKPLSERAISTIKHFLEHAPNQNASVWQQALGGAAGRVAPDQTAFYYR
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHH
DAIIAQEYLTNWTSPGEKRQNVRWIEGLRTSLSKETMGDYVNWPDIEIRNWPRTYYGENV
HHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHCCCCH
ERLRRVKTTYDPENVFRFEQSIPPLRRSLFF
HHHHHHHCCCCHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MEKTKLTGRIVTRDDPDYNEARTNINLSLERYPDIIVFCQNKQDALNALKWARENRVPFR
CCCCCCCEEEEECCCCCHHHHHCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCEE
IRGGRHSYENFSLLNNGLVIDLSEMKKITVNQDKKLAYIEAGAELGEVYRTLWQYGLTLP
EECCCCCCCCHHEECCCEEEEHHHCCEEECCCCCEEEEEECCHHHHHHHHHHHHCCCCCC
AGTIANVGLTGLTLGGGIGLLTRAAGLTCDSLVQLEMIVADEKEGADLITVSCSNHPDLF
CCHHHHCCCCEEEECCCHHHHHHHCCCCHHHHHEEEEEEECCCCCCCEEEEEECCCCCEE
WASQGGGGGNFGIVTSMTFKAVPISQVSIFSITWGWDDFEEVYNTWQNWAPYTDDRLTSS
EECCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHH
IEFWPKEVNRIEALGQFVGPKTELKKLLKPLLKAGSPTSGMVKTTPFIEAVTFFNSPGGN
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCCCC
QPQKMKRSGSFIEKPLSERAISTIKHFLEHAPNQNASVWQQALGGAAGRVAPDQTAFYYR
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHH
DAIIAQEYLTNWTSPGEKRQNVRWIEGLRTSLSKETMGDYVNWPDIEIRNWPRTYYGENV
HHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHCCCCH
ERLRRVKTTYDPENVFRFEQSIPPLRRSLFF
HHHHHHHCCCCHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377