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The map label for this gene is yczE

Identifier: 255767110

GI number: 255767110

Start: 408240

End: 408887

Strand: Reverse

Name: yczE

Synonym: BSU03580

Alternate gene names: 255767110

Gene position: 408887-408240 (Counterclockwise)

Preceding gene: 255767111

Following gene: 255767109

Centisome position: 9.7

GC content: 49.69

Gene sequence:

>648_bases
GTGAAGCAAGAACTTGTTCTGCGCTGGACATTTTATTTTGCCGGTTTGATCATTTTGGCTTTTGGTGTATCCCTGACGAT
AGAAGGAAAAGCACTCGGCATTAGTCCGTGGGATGCATTTCATTACAGCCTGTTTCAGCACTTCGGGCTTACCGTCGGCC
AGTGGTCCATCATTATTGGAGCGCTCATCGTCGGATTCACGTCATTGTTTACGAGAGCTTGGCCGAAAATTGGTGCCCTC
CTGAATATGGTGCTCATTGGTGTATTTATAGATTTTTTCAATTTCATTCTGCCTGCCCTCTCGACCTACACAGGCTCGAT
CATCGTCTTCTCTCTAGGCGTGGTGCTGATTGGTTACGGCGTCGGTGTTTATGTATCAGCAGGCCTTGGCGCGGGGCCGC
GTGATTCACTGATGATGCTGATTACAGAAAAAACCGGCTGGAATGTGCAATGGGTGCGGAACGGCATGGAATTAACCATT
TTGTTTGCGGCATGGGGCATGGGCGGACCGATCGGTTTTGGCACCATTTTGACCGCCATCCTCACCGGACTTATTTTGCG
TTTTTCATTGCCCCAGTCAATCCAGTTGCTGAATTATGCTGTGGCAAGGCGGACAGCCGCAGTGAAAGCATCTCCGCCTG
TACACTAA

Upstream 100 bases:

>100_bases
CGGCCCTGTTTTTTTGTTGAGCCCCTTTCGCCTATTCCGCCCTTCTGTCAGATGTGCTACAATGACAATCGACTGATTTT
TACGAAAGAAGGGACCTCAC

Downstream 100 bases:

>100_bases
AACAAAGCCGCCTTGGCTTTGTTTTTTTATTTTCTCCTCTATATGAGTCTTGTGGAAGTATGATAGGATGGTTTTGACAA
TCTTTTGCAGACGGAGGATC

Product: integral inner membrane protein regulating antibiotic production

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKQELVLRWTFYFAGLIILAFGVSLTIEGKALGISPWDAFHYSLFQHFGLTVGQWSIIIGALIVGFTSLFTRAWPKIGAL
LNMVLIGVFIDFFNFILPALSTYTGSIIVFSLGVVLIGYGVGVYVSAGLGAGPRDSLMMLITEKTGWNVQWVRNGMELTI
LFAAWGMGGPIGFGTILTAILTGLILRFSLPQSIQLLNYAVARRTAAVKASPPVH

Sequences:

>Translated_215_residues
MKQELVLRWTFYFAGLIILAFGVSLTIEGKALGISPWDAFHYSLFQHFGLTVGQWSIIIGALIVGFTSLFTRAWPKIGAL
LNMVLIGVFIDFFNFILPALSTYTGSIIVFSLGVVLIGYGVGVYVSAGLGAGPRDSLMMLITEKTGWNVQWVRNGMELTI
LFAAWGMGGPIGFGTILTAILTGLILRFSLPQSIQLLNYAVARRTAAVKASPPVH
>Mature_215_residues
MKQELVLRWTFYFAGLIILAFGVSLTIEGKALGISPWDAFHYSLFQHFGLTVGQWSIIIGALIVGFTSLFTRAWPKIGAL
LNMVLIGVFIDFFNFILPALSTYTGSIIVFSLGVVLIGYGVGVYVSAGLGAGPRDSLMMLITEKTGWNVQWVRNGMELTI
LFAAWGMGGPIGFGTILTAILTGLILRFSLPQSIQLLNYAVARRTAAVKASPPVH

Specific function: Unknown

COG id: COG2364

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCZE_BACSU (O34927)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_388240.2
- EnsemblBacteria:   EBBACT00000003891
- GeneID:   938302
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU03580
- GenoList:   BSU03580
- GeneTree:   EBGT00050000000590
- HOGENOM:   HBG728442
- ProtClustDB:   CLSK872975
- BioCyc:   BSUB:BSU03580-MONOMER
- InterPro:   IPR003740

Pfam domain/function: PF02588 DUF161

EC number: NA

Molecular weight: Translated: 23333; Mature: 23333

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc4d60ec)-; HASH(0xb08fdd8)-; HASH(0xc5ba060)-; HASH(0xc480bd8)-; HASH(0xcc44d04)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQELVLRWTFYFAGLIILAFGVSLTIEGKALGISPWDAFHYSLFQHFGLTVGQWSIIIG
CCCHHHHHHHHHHHHHHHHHHCCEEEECCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHH
ALIVGFTSLFTRAWPKIGALLNMVLIGVFIDFFNFILPALSTYTGSIIVFSLGVVLIGYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
VGVYVSAGLGAGPRDSLMMLITEKTGWNVQWVRNGMELTILFAAWGMGGPIGFGTILTAI
HHHEEECCCCCCCCCCEEEEEECCCCCCHHEECCCCEEEEEEEECCCCCCCHHHHHHHHH
LTGLILRFSLPQSIQLLNYAVARRTAAVKASPPVH
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MKQELVLRWTFYFAGLIILAFGVSLTIEGKALGISPWDAFHYSLFQHFGLTVGQWSIIIG
CCCHHHHHHHHHHHHHHHHHHCCEEEECCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHH
ALIVGFTSLFTRAWPKIGALLNMVLIGVFIDFFNFILPALSTYTGSIIVFSLGVVLIGYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
VGVYVSAGLGAGPRDSLMMLITEKTGWNVQWVRNGMELTILFAAWGMGGPIGFGTILTAI
HHHEEECCCCCCCCCCEEEEEECCCCCCHHEECCCCEEEEEEEECCCCCCCHHHHHHHHH
LTGLILRFSLPQSIQLLNYAVARRTAAVKASPPVH
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377