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The map label for this gene is parB

Identifier: 16081148

GI number: 16081148

Start: 4205556

End: 4206404

Strand: Reverse

Name: parB

Synonym: BSU40960

Alternate gene names: 16081148

Gene position: 4206404-4205556 (Counterclockwise)

Preceding gene: 16081149

Following gene: 16081146

Centisome position: 99.78

GC content: 40.75

Gene sequence:

>849_bases
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCCTTTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAACAGCTTATTGCCGAAGGCACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAACTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Upstream 100 bases:

>100_bases
CTGAGTGAGGCACCGAGTCACGGAAAACCCATCATTTTATACGATCCGCGGTCAAGAGGTGCGGAAGTATATTTAGATTT
AGCAAAGGAAGTGGCTGCGA

Downstream 100 bases:

>100_bases
ATGAAAAAACCATCTTTCAAACGAAGATGGTTTTTATTTTATATGCGCCCAGTGAGCCTTTGCAACGGGTTAAGGCGTTC
TTGCCTCCACTCTGTCCGAT

Product: site-specific DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Sequences:

>Translated_282_residues
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES
>Mature_281_residues
AKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERRF
RAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLTL
PENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESYL
QNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SP0J_BACSU (P26497)

Other databases:

- EMBL:   D26185
- EMBL:   X62539
- EMBL:   AL009126
- EMBL:   M59938
- PIR:   I40445
- RefSeq:   NP_391976.1
- ProteinModelPortal:   P26497
- SMR:   P26497
- IntAct:   P26497
- EnsemblBacteria:   EBBACT00000000692
- GeneID:   937907
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40960
- NMPDR:   fig|224308.1.peg.4102
- GenoList:   BSU40960
- GeneTree:   EBGT00050000001341
- HOGENOM:   HBG641230
- OMA:   SASIKEH
- ProtClustDB:   CLSK888217
- BioCyc:   BSUB:BSU40960-MONOMER
- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741
- SMART:   SM00470
- TIGRFAMs:   TIGR00180

Pfam domain/function: PF08535 KorB; PF02195 ParBc; SSF110849 ParBc

EC number: NA

Molecular weight: Translated: 32211; Mature: 32080

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGIL
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH
QPLIVRKSLKGYDIVAGERRFRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSP
HHHHHHHHCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLTLPENIQQLIAEGTLSMGHGR
HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHEEEECHHHHHHHHHHCCCCCCCCC
TLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
EEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES
HHHHCCCCCEEEEHHCCCCEEEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGIL
CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH
QPLIVRKSLKGYDIVAGERRFRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSP
HHHHHHHHCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLTLPENIQQLIAEGTLSMGHGR
HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHEEEECHHHHHHHHHHCCCCCCCCC
TLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
EEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES
HHHHCCCCCEEEEHHCCCCEEEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208