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The map label for this gene is yyaD

Identifier: 16081146

GI number: 16081146

Start: 4203424

End: 4204440

Strand: Reverse

Name: yyaD

Synonym: BSU40940

Alternate gene names: 16081146

Gene position: 4204440-4203424 (Counterclockwise)

Preceding gene: 16081148

Following gene: 255767877

Centisome position: 99.74

GC content: 43.56

Gene sequence:

>1017_bases
GTGTTGTGGAGAGCCGGAATGAAGTGGATGCTGCTCATATTAGGGAGCCTGATCGGGGCCGGATATGCGAGCGGTCAGGA
GATATGGCAGTTTTTTGGGGCGGAAAGCGGACTTGCTATTGTGCTGTTTACAATTATGTTCATTTTCTCGTCTTATATTG
TGATGAAAATCAGTTTTAAGGTTCAATCCACTCATTTTCTGCCGGTTCTGGAGCATTTAATGGGGCCATGGCTGGCGAAA
ATTTATGATGTCCTCATCATTTTTTATTTGTTTTCGACGACTATGGTGATGATTGCCGGAGGCGGTGTGACCCTGCAAAT
GTACAAGCTTCCTTTCTGGTGGGGAATCACGCTGATTTGCATCGTGACAGTGTGCTTGTTTTTGTGGGATGTGAAAGGAA
TATTATCTATAAATAGTATTTTGATTCCTGTGTTAGTAGCGGGGCTTTTATATGCGCTGATCTCCTTTCAGAGCACACAT
CACCATACGTGGACGATTGATTTGTCCCAGCAGTATAACTGGCCTGCGAGCATTACGTTTACCTCTTTAAACATCCTTTC
AGTTGTTGCGATTTTATCCTCTGTTGGGAAAGAGATGAAAGGGCTCGGAGAAGCAAAAATCGCAAGTGTGGCAAGCGGTC
TTATTTTTGGCGTGATCTCATTTGTTTATAATGAAACGTTGGTGGAGCTGGCGGGCTCCCTTTCTCAGTTTGAAATACCG
CTGTTTGCCGTTCTGGAGGGTGCGCCTTATTTCCTTTTTTTATGTATGACGGCGGTGCTGTGCCTGGCGATTTACACGAC
GACGGTAGCTGGTTTGCTGGGTTTGTCCAGCCGGCTGATGGCGTTTATTCATATGCCGAGATGGATGATTGTGTTGATTT
TGTTAGTGTTAATGGTACCTTTTACTTCTTTCGGATTTTCTGATTTGATCGCGTTCTTGTATCCGATATATGGGATGCTC
AATTTGTATTTGTTAGTTTGTCTGCTCTTATATCCTATTTTGAGTAAATGGAAATAA

Upstream 100 bases:

>100_bases
GCTTGTGTTCAAATGTCTATGAAAATATGGCATGTTTGCTTTCCTTTATTTATATAGTAACAATAACGGGAACAAGCTGA
ACTTTGTCTATGAGGTGATA

Downstream 100 bases:

>100_bases
GAGGATGTATTTCTTTTCGGGTATCTTGATTGCTCTTATGATCAGTTTTTTTGTACAATAGATACAGCAGTTTAGGAAAA
GAGGTGAAGGGTCTTGGCGG

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MLWRAGMKWMLLILGSLIGAGYASGQEIWQFFGAESGLAIVLFTIMFIFSSYIVMKISFKVQSTHFLPVLEHLMGPWLAK
IYDVLIIFYLFSTTMVMIAGGGVTLQMYKLPFWWGITLICIVTVCLFLWDVKGILSINSILIPVLVAGLLYALISFQSTH
HHTWTIDLSQQYNWPASITFTSLNILSVVAILSSVGKEMKGLGEAKIASVASGLIFGVISFVYNETLVELAGSLSQFEIP
LFAVLEGAPYFLFLCMTAVLCLAIYTTTVAGLLGLSSRLMAFIHMPRWMIVLILLVLMVPFTSFGFSDLIAFLYPIYGML
NLYLLVCLLLYPILSKWK

Sequences:

>Translated_338_residues
MLWRAGMKWMLLILGSLIGAGYASGQEIWQFFGAESGLAIVLFTIMFIFSSYIVMKISFKVQSTHFLPVLEHLMGPWLAK
IYDVLIIFYLFSTTMVMIAGGGVTLQMYKLPFWWGITLICIVTVCLFLWDVKGILSINSILIPVLVAGLLYALISFQSTH
HHTWTIDLSQQYNWPASITFTSLNILSVVAILSSVGKEMKGLGEAKIASVASGLIFGVISFVYNETLVELAGSLSQFEIP
LFAVLEGAPYFLFLCMTAVLCLAIYTTTVAGLLGLSSRLMAFIHMPRWMIVLILLVLMVPFTSFGFSDLIAFLYPIYGML
NLYLLVCLLLYPILSKWK
>Mature_338_residues
MLWRAGMKWMLLILGSLIGAGYASGQEIWQFFGAESGLAIVLFTIMFIFSSYIVMKISFKVQSTHFLPVLEHLMGPWLAK
IYDVLIIFYLFSTTMVMIAGGGVTLQMYKLPFWWGITLICIVTVCLFLWDVKGILSINSILIPVLVAGLLYALISFQSTH
HHTWTIDLSQQYNWPASITFTSLNILSVVAILSSVGKEMKGLGEAKIASVASGLIFGVISFVYNETLVELAGSLSQFEIP
LFAVLEGAPYFLFLCMTAVLCLAIYTTTVAGLLGLSSRLMAFIHMPRWMIVLILLVLMVPFTSFGFSDLIAFLYPIYGML
NLYLLVCLLLYPILSKWK

Specific function: Unknown

COG id: COG3949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYAD_BACSU (P37520)

Other databases:

- EMBL:   X62539
- EMBL:   D26185
- EMBL:   AL009126
- PIR:   I40448
- RefSeq:   NP_391974.1
- ProteinModelPortal:   P37520
- EnsemblBacteria:   EBBACT00000003477
- GeneID:   937923
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40940
- NMPDR:   fig|224308.1.peg.4100
- GenoList:   BSU40940
- GeneTree:   EBGT00050000000873
- HOGENOM:   HBG644907
- OMA:   YEIPLFA
- ProtClustDB:   CLSK873782
- BioCyc:   BSUB:BSU40940-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37722; Mature: 37722

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWRAGMKWMLLILGSLIGAGYASGQEIWQFFGAESGLAIVLFTIMFIFSSYIVMKISFK
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEE
VQSTHFLPVLEHLMGPWLAKIYDVLIIFYLFSTTMVMIAGGGVTLQMYKLPFWWGITLIC
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH
IVTVCLFLWDVKGILSINSILIPVLVAGLLYALISFQSTHHHTWTIDLSQQYNWPASITF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEE
TSLNILSVVAILSSVGKEMKGLGEAKIASVASGLIFGVISFVYNETLVELAGSLSQFEIP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCH
LFAVLEGAPYFLFLCMTAVLCLAIYTTTVAGLLGLSSRLMAFIHMPRWMIVLILLVLMVP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
FTSFGFSDLIAFLYPIYGMLNLYLLVCLLLYPILSKWK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLWRAGMKWMLLILGSLIGAGYASGQEIWQFFGAESGLAIVLFTIMFIFSSYIVMKISFK
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEE
VQSTHFLPVLEHLMGPWLAKIYDVLIIFYLFSTTMVMIAGGGVTLQMYKLPFWWGITLIC
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH
IVTVCLFLWDVKGILSINSILIPVLVAGLLYALISFQSTHHHTWTIDLSQQYNWPASITF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEE
TSLNILSVVAILSSVGKEMKGLGEAKIASVASGLIFGVISFVYNETLVELAGSLSQFEIP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCH
LFAVLEGAPYFLFLCMTAVLCLAIYTTTVAGLLGLSSRLMAFIHMPRWMIVLILLVLMVP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
FTSFGFSDLIAFLYPIYGMLNLYLLVCLLLYPILSKWK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377