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The map label for this gene is yybC

Identifier: 16081121

GI number: 16081121

Start: 4181982

End: 4182461

Strand: Direct

Name: yybC

Synonym: BSU40690

Alternate gene names: 16081121

Gene position: 4181982-4182461 (Clockwise)

Preceding gene: 16081120

Following gene: 16081124

Centisome position: 99.2

GC content: 42.29

Gene sequence:

>480_bases
ATGCCAGCAAATAAAAAAGAAGGCCTTATATTTGGCGTGATGATGTGCTTTGGAATGGTTTGCGTCATGTCGATTTACAA
TGCCATCATCAACCGAGCCATCTACGATTTTTCACTGATGACCGTTTTTGAAATGGTCATCGGTTTTATGATCGCCCTCC
TGTTAGATTTACTGTTAGTGGGCCCCCTCGCCAAGAAGATTGCATTCCGCATGCCGTTCGACAAGACTAAAAAAATTTAT
GTCATCCTTGCCATGTCAACTTGTATGGTGATTGGCATGGTACTTTGTATGTCTGTGTTCGGTTTAGTGACAGCGGTTCT
AGCAAATGGGCTGAACGGGGACAGCCTCTTCAGTGCTTATCTTATGATTGTGTTGAAAAATTTCATCCTGGCCTATCCGT
TGCAATTACTGATTATGGGCCCATTAGTCAGAGGAGTTTTCATGAAATTTGTAAAACCAAAGCTCACAGCCGCAATTTAA

Upstream 100 bases:

>100_bases
GACGATTCTGCGCTATAGATTGTTCACAAATTTGTCACTTATGAGCATGAACGGTTCATTGGTATACTAATCACCGATTA
TGGAGAGAAGGAATGATTGT

Downstream 100 bases:

>100_bases
ATAGAAAAGGAGTGAGCCTGACACTCACTCCTTTTGCTCATGAATCGAATGTAAAACAAGCTCCGCAAAAGCCTCTGCGG
CAGGCAGCTGCCATTTTTTC

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MPANKKEGLIFGVMMCFGMVCVMSIYNAIINRAIYDFSLMTVFEMVIGFMIALLLDLLLVGPLAKKIAFRMPFDKTKKIY
VILAMSTCMVIGMVLCMSVFGLVTAVLANGLNGDSLFSAYLMIVLKNFILAYPLQLLIMGPLVRGVFMKFVKPKLTAAI

Sequences:

>Translated_159_residues
MPANKKEGLIFGVMMCFGMVCVMSIYNAIINRAIYDFSLMTVFEMVIGFMIALLLDLLLVGPLAKKIAFRMPFDKTKKIY
VILAMSTCMVIGMVLCMSVFGLVTAVLANGLNGDSLFSAYLMIVLKNFILAYPLQLLIMGPLVRGVFMKFVKPKLTAAI
>Mature_158_residues
PANKKEGLIFGVMMCFGMVCVMSIYNAIINRAIYDFSLMTVFEMVIGFMIALLLDLLLVGPLAKKIAFRMPFDKTKKIYV
ILAMSTCMVIGMVLCMSVFGLVTAVLANGLNGDSLFSAYLMIVLKNFILAYPLQLLIMGPLVRGVFMKFVKPKLTAAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYBC_BACSU (P37501)

Other databases:

- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S65994
- RefSeq:   NP_391949.1
- ProteinModelPortal:   P37501
- EnsemblBacteria:   EBBACT00000000281
- GeneID:   937862
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40690
- NMPDR:   fig|224308.1.peg.4075
- GenoList:   BSU40690
- GeneTree:   EBGT00050000003549
- HOGENOM:   HBG533002
- OMA:   MATTMVI
- ProtClustDB:   CLSK888205
- BioCyc:   BSUB:BSU40690-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17570; Mature: 17439

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
10.1 %Met     (Translated Protein)
12.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
9.5 %Met     (Mature Protein)
12.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANKKEGLIFGVMMCFGMVCVMSIYNAIINRAIYDFSLMTVFEMVIGFMIALLLDLLLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPLAKKIAFRMPFDKTKKIYVILAMSTCMVIGMVLCMSVFGLVTAVLANGLNGDSLFSAY
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LMIVLKNFILAYPLQLLIMGPLVRGVFMKFVKPKLTAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PANKKEGLIFGVMMCFGMVCVMSIYNAIINRAIYDFSLMTVFEMVIGFMIALLLDLLLV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPLAKKIAFRMPFDKTKKIYVILAMSTCMVIGMVLCMSVFGLVTAVLANGLNGDSLFSAY
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LMIVLKNFILAYPLQLLIMGPLVRGVFMKFVKPKLTAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377