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The map label for this gene is yybD

Identifier: 16081120

GI number: 16081120

Start: 4181456

End: 4181899

Strand: Direct

Name: yybD

Synonym: BSU40680

Alternate gene names: 16081120

Gene position: 4181456-4181899 (Clockwise)

Preceding gene: 255767875

Following gene: 16081121

Centisome position: 99.19

GC content: 45.95

Gene sequence:

>444_bases
ATGAATGTCAAAAAAATCACGTCAGAACAGGATTTACATACAGCGTTTGAAATCAGAAAGGCAGTATTTGTAGAGGAACA
AGGCTGTCCCATTTCGGATGAATTCGATGAGTTCGATACACTCCACGGTGACTGCCAGCACATCCTGGCTTATCATCAGA
ATGTACCTGTTGGCACTGCACGTGTCCGTATCGTTGGCCACACGGGGAAACTGGAACGAATCTGCATTCTGAAGTCTTAC
CGCAAATTCGGTTTGGGAAAAGTGATCGTCGATGCATTAGAACGTATTGTAAAAGAACAAGGCATTTCTGCCTTCAAACT
GCACGGCCAGACACAGGCGGCAGGCTTTTATGAAAAGCTCGGCTATCGGACTGCATCAGAAGAATTTATGCTGGACGGCA
TTCCGCATGTGCTGATGACAAAACAAGACGATTCTGCGCTATAG

Upstream 100 bases:

>100_bases
ATAGGAATTGCCTGGATAAAAGGCAGGTTTTTATCACCGGTTGCTGAGACCTTTAAACAATATGTGATCAGCCATTTTTC
TGAGTAGGAAGGATTCAAGC

Downstream 100 bases:

>100_bases
ATTGTTCACAAATTTGTCACTTATGAGCATGAACGGTTCATTGGTATACTAATCACCGATTATGGAGAGAAGGAATGATT
GTATGCCAGCAAATAAAAAA

Product: acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNVKKITSEQDLHTAFEIRKAVFVEEQGCPISDEFDEFDTLHGDCQHILAYHQNVPVGTARVRIVGHTGKLERICILKSY
RKFGLGKVIVDALERIVKEQGISAFKLHGQTQAAGFYEKLGYRTASEEFMLDGIPHVLMTKQDDSAL

Sequences:

>Translated_147_residues
MNVKKITSEQDLHTAFEIRKAVFVEEQGCPISDEFDEFDTLHGDCQHILAYHQNVPVGTARVRIVGHTGKLERICILKSY
RKFGLGKVIVDALERIVKEQGISAFKLHGQTQAAGFYEKLGYRTASEEFMLDGIPHVLMTKQDDSAL
>Mature_147_residues
MNVKKITSEQDLHTAFEIRKAVFVEEQGCPISDEFDEFDTLHGDCQHILAYHQNVPVGTARVRIVGHTGKLERICILKSY
RKFGLGKVIVDALERIVKEQGISAFKLHGQTQAAGFYEKLGYRTASEEFMLDGIPHVLMTKQDDSAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYBD_BACSU (P37500)

Other databases:

- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S65993
- RefSeq:   NP_391948.1
- ProteinModelPortal:   P37500
- SMR:   P37500
- EnsemblBacteria:   EBBACT00000002754
- GeneID:   938072
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40680
- NMPDR:   fig|224308.1.peg.4074
- GenoList:   BSU40680
- GeneTree:   EBGT00050000001652
- HOGENOM:   HBG703940
- OMA:   CHIGRMA
- PhylomeDB:   P37500
- ProtClustDB:   CLSK2518291
- BioCyc:   BSUB:BSU40680-MONOMER
- InterPro:   IPR000182
- InterPro:   IPR016181
- Gene3D:   G3DSA:3.40.630.30

Pfam domain/function: PF00583 Acetyltransf_1; SSF55729 Acyl_CoA_acyltransferase

EC number: NA

Molecular weight: Translated: 16564; Mature: 16564

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS51186 GNAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKKITSEQDLHTAFEIRKAVFVEEQGCPISDEFDEFDTLHGDCQHILAYHQNVPVGTA
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
RVRIVGHTGKLERICILKSYRKFGLGKVIVDALERIVKEQGISAFKLHGQTQAAGFYEKL
EEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
GYRTASEEFMLDGIPHVLMTKQDDSAL
CCCCCCCHHHHCCCCCEEEECCCCCCC
>Mature Secondary Structure
MNVKKITSEQDLHTAFEIRKAVFVEEQGCPISDEFDEFDTLHGDCQHILAYHQNVPVGTA
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
RVRIVGHTGKLERICILKSYRKFGLGKVIVDALERIVKEQGISAFKLHGQTQAAGFYEKL
EEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
GYRTASEEFMLDGIPHVLMTKQDDSAL
CCCCCCCHHHHCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377