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The map label for this gene is yybM

Identifier: 16081111

GI number: 16081111

Start: 4173665

End: 4174420

Strand: Direct

Name: yybM

Synonym: BSU40590

Alternate gene names: 16081111

Gene position: 4173665-4174420 (Clockwise)

Preceding gene: 16081110

Following gene: 16081112

Centisome position: 99.01

GC content: 28.04

Gene sequence:

>756_bases
ATGGAAAGTCATATTTATCGCATTATCAAAAATAAATTAACTATAATAATATTTACTATAATCATATTAATTCCTTGTGT
TGATATATCACTATTGTTAATGACTAACACAGAATACCATCCTGCATATGCGTTTTTCCTTTCTGGCACTTCCGTAGGGC
ATGCTTCACAAATGATCCTATTATGGTTTCTTCCGCTTTATTTTTTGTTACTATGTGCTGACGATTCTATACAAGATTAT
AAAACAGGATATCATTACATTCTTATAAGCAAAGTTGGCAGAAAAAAATATTGTTTGGAAAAAATATTTACCTCTTTTAT
CATTTCATTTTTGACAATGTTTTTGTCACTAATATTAAACTTTTTATTGGTTCAGGTTTTCTTTTTTAAAGGTACATTTA
AAAATGACTTAGACCAAATTAAATTCCCTGATAACAGCCTTTATACTTTTAGTATGGCCCATCCTTATATAGCAATTGTG
TTATTTTCTATTATTTGTTGTATTATGTCTGGATTTGTTGGAGCACTTGGTTCAAGCCTCAGTTTACTTTTTCGTGATAA
GAAGTATGCCTACCCAGCAAGTTTTTTTATTTGGTTCGTACTTATACTAAAAAACAAATCATTAATGTTTTTATTCCAAC
CGTTTACAGAATACGGTTATAATGTACTTCTCCCTATCCTATGTTTGTCTATCTTTATTTTTCTAATAATAATTTCTAGT
ATTGTTTTATATGAGGCAAAATACAATGAAAATTAA

Upstream 100 bases:

>100_bases
AAAAACGTTGGCACCTTTTAGCCACGCGAAAAAATTTAGAATGATAATCTTTTTATAAGATTATCATTTTTATTTATTCT
ATTAAGAATTGAGTGAGAAC

Downstream 100 bases:

>100_bases
AAGACTACTATTAATTTTATGTTTACTACTATTTTTAGTTACTTTATGGTTCAACCAGAACCACACTTATCTTGGAAAGA
ATTCTATCGCGTCATTACTA

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MESHIYRIIKNKLTIIIFTIIILIPCVDISLLLMTNTEYHPAYAFFLSGTSVGHASQMILLWFLPLYFLLLCADDSIQDY
KTGYHYILISKVGRKKYCLEKIFTSFIISFLTMFLSLILNFLLVQVFFFKGTFKNDLDQIKFPDNSLYTFSMAHPYIAIV
LFSIICCIMSGFVGALGSSLSLLFRDKKYAYPASFFIWFVLILKNKSLMFLFQPFTEYGYNVLLPILCLSIFIFLIIISS
IVLYEAKYNEN

Sequences:

>Translated_251_residues
MESHIYRIIKNKLTIIIFTIIILIPCVDISLLLMTNTEYHPAYAFFLSGTSVGHASQMILLWFLPLYFLLLCADDSIQDY
KTGYHYILISKVGRKKYCLEKIFTSFIISFLTMFLSLILNFLLVQVFFFKGTFKNDLDQIKFPDNSLYTFSMAHPYIAIV
LFSIICCIMSGFVGALGSSLSLLFRDKKYAYPASFFIWFVLILKNKSLMFLFQPFTEYGYNVLLPILCLSIFIFLIIISS
IVLYEAKYNEN
>Mature_251_residues
MESHIYRIIKNKLTIIIFTIIILIPCVDISLLLMTNTEYHPAYAFFLSGTSVGHASQMILLWFLPLYFLLLCADDSIQDY
KTGYHYILISKVGRKKYCLEKIFTSFIISFLTMFLSLILNFLLVQVFFFKGTFKNDLDQIKFPDNSLYTFSMAHPYIAIV
LFSIICCIMSGFVGALGSSLSLLFRDKKYAYPASFFIWFVLILKNKSLMFLFQPFTEYGYNVLLPILCLSIFIFLIIISS
IVLYEAKYNEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYBM_BACSU (P37491)

Other databases:

- EMBL:   M77837
- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S65984
- RefSeq:   NP_391939.1
- ProteinModelPortal:   P37491
- EnsemblBacteria:   EBBACT00000000630
- GeneID:   937824
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40590
- NMPDR:   fig|224308.1.peg.4065
- GenoList:   BSU40590
- HOGENOM:   HBG313949
- OMA:   FQPFTEY
- ProtClustDB:   CLSK226575
- BioCyc:   BSUB:BSU40590-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29120; Mature: 29120

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESHIYRIIKNKLTIIIFTIIILIPCVDISLLLMTNTEYHPAYAFFLSGTSVGHASQMIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCCCHHHHHHH
LWFLPLYFLLLCADDSIQDYKTGYHYILISKVGRKKYCLEKIFTSFIISFLTMFLSLILN
HHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLVQVFFFKGTFKNDLDQIKFPDNSLYTFSMAHPYIAIVLFSIICCIMSGFVGALGSSL
HHHHHHHHHCCCHHCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLFRDKKYAYPASFFIWFVLILKNKSLMFLFQPFTEYGYNVLLPILCLSIFIFLIIISS
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHH
IVLYEAKYNEN
HHHHHHCCCCC
>Mature Secondary Structure
MESHIYRIIKNKLTIIIFTIIILIPCVDISLLLMTNTEYHPAYAFFLSGTSVGHASQMIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCCCHHHHHHH
LWFLPLYFLLLCADDSIQDYKTGYHYILISKVGRKKYCLEKIFTSFIISFLTMFLSLILN
HHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLVQVFFFKGTFKNDLDQIKFPDNSLYTFSMAHPYIAIVLFSIICCIMSGFVGALGSSL
HHHHHHHHHCCCHHCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLFRDKKYAYPASFFIWFVLILKNKSLMFLFQPFTEYGYNVLLPILCLSIFIFLIIISS
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHH
IVLYEAKYNEN
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938973; 7584024; 9384377